Click here to switch to the map view.

The map label for this gene is 52840718

Identifier: 52840718

GI number: 52840718

Start: 515576

End: 515872

Strand: Reverse

Name: 52840718

Synonym: lpg0473

Alternate gene names: NA

Gene position: 515872-515576 (Counterclockwise)

Preceding gene: 52840720

Following gene: 52840716

Centisome position: 15.18

GC content: 36.7

Gene sequence:

>297_bases
ATGCATAGAGTTATGTCTAATCGAAAAAATAAAACTATTGTCATTGAGGGTGTTACTTCACAAGGCAAAACATTTCGCCC
AAGTGACTGGGCCGAGCGTATGAGCGGTTCTTTAGCTGTTTTTAAAAATAGTAGAATTTATTATTCTCCGCTCTTGCAAC
CAAGCGTTAATAGTGAGGGTTATAAATGCGTTTTACTTGATCCCAAACTCAAGGAATCAAGCCCACAAGTTTATCAGGCA
ATTATGGATTTTGCTAAAGCTAACAACTTGAAAATCTGTGGTGAAGAAGACTTATAA

Upstream 100 bases:

>100_bases
GGCAATGACTAAAGCGAAACAACCATTTATTGCAATAAAATAATTAATTTTCCCTGCAGGCCCAGCATGATGATGATATA
ATTATCATACTGTATTTAAT

Downstream 100 bases:

>100_bases
CATTCCAAAGGATTGCCCTCCAGTTTTATTTTCTCAGGACTTAGGAAAACCCCCAATTTCTTGGTTAAAAACATTTTTGC
CTCGATCTTGGGGGTTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MHRVMSNRKNKTIVIEGVTSQGKTFRPSDWAERMSGSLAVFKNSRIYYSPLLQPSVNSEGYKCVLLDPKLKESSPQVYQA
IMDFAKANNLKICGEEDL

Sequences:

>Translated_98_residues
MHRVMSNRKNKTIVIEGVTSQGKTFRPSDWAERMSGSLAVFKNSRIYYSPLLQPSVNSEGYKCVLLDPKLKESSPQVYQA
IMDFAKANNLKICGEEDL
>Mature_98_residues
MHRVMSNRKNKTIVIEGVTSQGKTFRPSDWAERMSGSLAVFKNSRIYYSPLLQPSVNSEGYKCVLLDPKLKESSPQVYQA
IMDFAKANNLKICGEEDL

Specific function: Unknown

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11086; Mature: 11086

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRVMSNRKNKTIVIEGVTSQGKTFRPSDWAERMSGSLAVFKNSRIYYSPLLQPSVNSEG
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCEEEEECCEEEECCCCCCCCCCCC
YKCVLLDPKLKESSPQVYQAIMDFAKANNLKICGEEDL
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCC
>Mature Secondary Structure
MHRVMSNRKNKTIVIEGVTSQGKTFRPSDWAERMSGSLAVFKNSRIYYSPLLQPSVNSEG
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCEEEEECCEEEECCCCCCCCCCCC
YKCVLLDPKLKESSPQVYQAIMDFAKANNLKICGEEDL
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA