Click here to switch to the map view.

The map label for this gene is 52840710

Identifier: 52840710

GI number: 52840710

Start: 506479

End: 506718

Strand: Reverse

Name: 52840710

Synonym: lpg0465

Alternate gene names: NA

Gene position: 506718-506479 (Counterclockwise)

Preceding gene: 52840713

Following gene: 52840709

Centisome position: 14.91

GC content: 34.17

Gene sequence:

>240_bases
ATGGGCATCACGCAAGGTGACATCTGTTATAAACGTTTTAGACATAAGCTCTTCCTGGCTCAAGAAATAAATAAAAATAT
CATAAACCTAAAATCGGTACACTCTTTAAGTACAATCCATTGCTTTTTACTAAATATAAAATTTCTTGCTAAACTTGCGG
AGATCTTGCCGATATCCTCGCAGATATATAGACATGTTCATAAAGTTCAGGCAAAATCTGCAAATCTCAGACTATACTGA

Upstream 100 bases:

>100_bases
CGCCTCCCCAGACTTCCATAGCCCAAAATCCTACATCATCCATTTTATTACAGATTGGCAACATATCTTCAGTACGCATT
CTTGTAGCGATTAAGCATTG

Downstream 100 bases:

>100_bases
TGTGTAATGAAAAAAATTCTAGTATTACATGGTCCTAATCTAAACCTTTTAGGCTCCCGAGAACCGTCCATTTATGGACA
TGCTTCGTTAACTCAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MGITQGDICYKRFRHKLFLAQEINKNIINLKSVHSLSTIHCFLLNIKFLAKLAEILPISSQIYRHVHKVQAKSANLRLY

Sequences:

>Translated_79_residues
MGITQGDICYKRFRHKLFLAQEINKNIINLKSVHSLSTIHCFLLNIKFLAKLAEILPISSQIYRHVHKVQAKSANLRLY
>Mature_78_residues
GITQGDICYKRFRHKLFLAQEINKNIINLKSVHSLSTIHCFLLNIKFLAKLAEILPISSQIYRHVHKVQAKSANLRLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9191; Mature: 9060

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITQGDICYKRFRHKLFLAQEINKNIINLKSVHSLSTIHCFLLNIKFLAKLAEILPISS
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QIYRHVHKVQAKSANLRLY
HHHHHHHHHHHCCCCEECC
>Mature Secondary Structure 
GITQGDICYKRFRHKLFLAQEINKNIINLKSVHSLSTIHCFLLNIKFLAKLAEILPISS
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QIYRHVHKVQAKSANLRLY
HHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA