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The map label for this gene is osmY

Identifier: 52840627

GI number: 52840627

Start: 424005

End: 424571

Strand: Reverse

Name: osmY

Synonym: lpg0382

Alternate gene names: 52840627

Gene position: 424571-424005 (Counterclockwise)

Preceding gene: 52840628

Following gene: 52840626

Centisome position: 12.5

GC content: 40.92

Gene sequence:

>567_bases
CTGGAGGACACAACCATGCCTAAGTGTATGCATTTTATTTTGGCTACTGCATTAATTTTTGTTACAAGTACATTTTATGC
CAGCAATCTACGGGAAATAGAACAAGAAGTAAGTGATTCAGTGATTACTGCCAAAATTACTGCAAAGTTTGCCGAAAGCA
GGCACTTGAATCCATTAAAAATTTCAATTGACACAGAAAAGGGAATCGTGACTCTAAGTGGCTATGCTCCTGATAAACAG
GCTTTCATAGATGCCTTGCAGATCGCCAAAAACACGAAAGGTGTCAAGGCGGTTCATGCCAAAGAGCTCCACATAAAGAA
AGTCAATACCGCTTTCACAGATGCCTTCATCACGGCAGAAGTTGAAACTGCTGTTCTAAAAGCCAAAATTCTGGATGATG
AATCAATACCATTGGTTGGAATCAATGCCAGCACAACGAATGGCGAGGTCACCTTGTCTGGGCATGTAAAAAGTGCGCGC
TCCATTGCTGCCATCATTAAACGCGTAAATGAGATACCTGGCGTCAAAAAAATCGTTACCAATTTGGAAATTCAGGAAAA
TACATGA

Upstream 100 bases:

>100_bases
TTTTTTTAATGAGAGAGTTTAGATACACTAAATGACCTAATTAAAAACATTTTTTAACAAAGAGATTGGGGTTTTTCGTA
AGTCCTGATAAAAGCAACAA

Downstream 100 bases:

>100_bases
GTCCATTAACCCAATTTAAATTCTTTTTATGGTTTTTTAGCCACTTTAAAGTAGCCTTGATTGGTTATTTAAAGCCTAAG
TTAATTCAGCTTACCGATAA

Product: osmotically inducible protein Y

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MEDTTMPKCMHFILATALIFVTSTFYASNLREIEQEVSDSVITAKITAKFAESRHLNPLKISIDTEKGIVTLSGYAPDKQ
AFIDALQIAKNTKGVKAVHAKELHIKKVNTAFTDAFITAEVETAVLKAKILDDESIPLVGINASTTNGEVTLSGHVKSAR
SIAAIIKRVNEIPGVKKIVTNLEIQENT

Sequences:

>Translated_188_residues
MEDTTMPKCMHFILATALIFVTSTFYASNLREIEQEVSDSVITAKITAKFAESRHLNPLKISIDTEKGIVTLSGYAPDKQ
AFIDALQIAKNTKGVKAVHAKELHIKKVNTAFTDAFITAEVETAVLKAKILDDESIPLVGINASTTNGEVTLSGHVKSAR
SIAAIIKRVNEIPGVKKIVTNLEIQENT
>Mature_188_residues
MEDTTMPKCMHFILATALIFVTSTFYASNLREIEQEVSDSVITAKITAKFAESRHLNPLKISIDTEKGIVTLSGYAPDKQ
AFIDALQIAKNTKGVKAVHAKELHIKKVNTAFTDAFITAEVETAVLKAKILDDESIPLVGINASTTNGEVTLSGHVKSAR
SIAAIIKRVNEIPGVKKIVTNLEIQENT

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1790836, Length=164, Percent_Identity=29.8780487804878, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 20435; Mature: 20435

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDTTMPKCMHFILATALIFVTSTFYASNLREIEQEVSDSVITAKITAKFAESRHLNPLK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEE
ISIDTEKGIVTLSGYAPDKQAFIDALQIAKNTKGVKAVHAKELHIKKVNTAFTDAFITAE
EEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHHEEEHHCHHHHHHEEEHH
VETAVLKAKILDDESIPLVGINASTTNGEVTLSGHVKSARSIAAIIKRVNEIPGVKKIVT
HHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHH
NLEIQENT
CCEEECCC
>Mature Secondary Structure
MEDTTMPKCMHFILATALIFVTSTFYASNLREIEQEVSDSVITAKITAKFAESRHLNPLK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCEEE
ISIDTEKGIVTLSGYAPDKQAFIDALQIAKNTKGVKAVHAKELHIKKVNTAFTDAFITAE
EEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEHHHHHEEEHHCHHHHHHEEEHH
VETAVLKAKILDDESIPLVGINASTTNGEVTLSGHVKSARSIAAIIKRVNEIPGVKKIVT
HHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHH
NLEIQENT
CCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]