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The map label for this gene is 52840623

Identifier: 52840623

GI number: 52840623

Start: 419956

End: 421212

Strand: Reverse

Name: 52840623

Synonym: lpg0378

Alternate gene names: NA

Gene position: 421212-419956 (Counterclockwise)

Preceding gene: 52840624

Following gene: 52840622

Centisome position: 12.4

GC content: 39.06

Gene sequence:

>1257_bases
GTGTCTTCTTACAACGAATTCGCAGGAAACATGGTTATGTCTGATTTTCCTATTTTTTCTGTCTTGGGGATTGAAATAGA
ATATATGCTGGTGGATAAAGAGAGTTTAAATGTCCAACCTAAAAGCGATCTTATTCTAAGGGCTTTGGCAGGTCATCAGG
TTAATGAAATAGAATTAGGAGACATTGCGATAAGCAATGAATTAGTATTGCATGTCCTTGAGTTAAAAAATAATGGTCCC
AAACCACTACATGTTCCAGTAGCTGAACATTTCCAGAAAACCATTAGAGAGCTCCAGCCCCTTCTTGCTCAACACAATTT
ATTGCTATTACCTACTGGCGCTCATCCCTGGATGGACCCAAATACTGAAACAATTCGCTGGCCTCATGGTAACCATGATA
TCTATAATCAATTTAATTCAATTTTCAATTGCCAGGGACATGGCTGGGCAAACTTGCAAAGTATGCATGTCAACCTGCCT
TATTCCAATGAAGAAGAATTTTGTCAATTGCATAACGCCACACGCTTGATTTTACCTTTATTACCCGCCATTGCGGCAAG
TACTCCATTCCTTGATGGCCAAGCTACAGGATTACTGGATTCTCGCTTGTACTTTTATAGTCGCAATCAGCAACGCATTC
CCTCCATCAGCGGCGATATTATTCCTGAGTTTATTAGAACAGAAAGGGAATACCAGGAACAAATTCTCGAACCCATGTAT
CGAGACATTAGCCCTTATGATCCCGAAGGTATATTACAATATCAATGGCTAAATTCTCGTGCTGCAATTCCCAAGTTTGA
CATGAAGGCTATTGAAATTCGCATTCTTGACAGCCAGGAATGTGTAGAAGCAGACATTGCCATAGCAAAAGCAATCAATG
CCATTTTAAAATACTGGCAAAGCACCTCGAATTTTTATCTTGATAATCCATGCGACACCAAGAGTTTAAAATACGTTTTT
GATGAAACCATAAAAAACGGATTAAGTTGTCATATCGATAACAAACGATTACTGGAGCAATGGCAATTACCCCTTCAAGG
GATGTCAGTCAATACCATCTGGTCACTATTGATCGAAAGAATTAGTCATGAACTGGATAGGAAACAGCAACTGGCTCTTG
AACTTATTTTAAAACAGGGAAATTTGAGTGAAAGAATCCTCAAGGCTTGTAGCTCCTGTGTCAATCATGATTCTTTAAAA
CAAGTGTATACGCAATTAGCCCATTGTTTGCTTCGTAATGAACAATTTACCCCCTGA

Upstream 100 bases:

>100_bases
GGCAATAAATACTACGTTATAGAAGTGAACGATAATCCCAATATTGATCATGGCCTTGAAGATAAAATACTAGGCCAAAA
TCTGTATGAGCAGATCATGA

Downstream 100 bases:

>100_bases
TATAATGAAAAATATAGCCCTTCTAATCAGTTGTGAACATGCTGTCAATACAGTTCCCTATGAATATCAAACCCTGTTTG
AACCTCATAAAGACATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSSYNEFAGNMVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVLHVLELKNNGP
KPLHVPVAEHFQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHVNLP
YSNEEEFCQLHNATRLILPLLPAIAASTPFLDGQATGLLDSRLYFYSRNQQRIPSISGDIIPEFIRTEREYQEQILEPMY
RDISPYDPEGILQYQWLNSRAAIPKFDMKAIEIRILDSQECVEADIAIAKAINAILKYWQSTSNFYLDNPCDTKSLKYVF
DETIKNGLSCHIDNKRLLEQWQLPLQGMSVNTIWSLLIERISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLK
QVYTQLAHCLLRNEQFTP

Sequences:

>Translated_418_residues
MSSYNEFAGNMVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVLHVLELKNNGP
KPLHVPVAEHFQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHVNLP
YSNEEEFCQLHNATRLILPLLPAIAASTPFLDGQATGLLDSRLYFYSRNQQRIPSISGDIIPEFIRTEREYQEQILEPMY
RDISPYDPEGILQYQWLNSRAAIPKFDMKAIEIRILDSQECVEADIAIAKAINAILKYWQSTSNFYLDNPCDTKSLKYVF
DETIKNGLSCHIDNKRLLEQWQLPLQGMSVNTIWSLLIERISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLK
QVYTQLAHCLLRNEQFTP
>Mature_417_residues
SSYNEFAGNMVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELGDIAISNELVLHVLELKNNGPK
PLHVPVAEHFQKTIRELQPLLAQHNLLLLPTGAHPWMDPNTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHVNLPY
SNEEEFCQLHNATRLILPLLPAIAASTPFLDGQATGLLDSRLYFYSRNQQRIPSISGDIIPEFIRTEREYQEQILEPMYR
DISPYDPEGILQYQWLNSRAAIPKFDMKAIEIRILDSQECVEADIAIAKAINAILKYWQSTSNFYLDNPCDTKSLKYVFD
ETIKNGLSCHIDNKRLLEQWQLPLQGMSVNTIWSLLIERISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLKQ
VYTQLAHCLLRNEQFTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006336 [H]

Pfam domain/function: PF04107 GCS2 [H]

EC number: NA

Molecular weight: Translated: 47971; Mature: 47840

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYNEFAGNMVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELG
CCCHHHHHCCCHHCCCCHHEECCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEC
DIAISNELVLHVLELKNNGPKPLHVPVAEHFQKTIRELQPLLAQHNLLLLPTGAHPWMDP
CEEECCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
NTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHVNLPYSNEEEFCQLHNATRLILPL
CCCEEECCCCCCHHHHHHHHHEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
LPAIAASTPFLDGQATGLLDSRLYFYSRNQQRIPSISGDIIPEFIRTEREYQEQILEPMY
HHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDISPYDPEGILQYQWLNSRAAIPKFDMKAIEIRILDSQECVEADIAIAKAINAILKYWQ
HCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
STSNFYLDNPCDTKSLKYVFDETIKNGLSCHIDNKRLLEQWQLPLQGMSVNTIWSLLIER
CCCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHH
ISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLKQVYTQLAHCLLRNEQFTP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSYNEFAGNMVMSDFPIFSVLGIEIEYMLVDKESLNVQPKSDLILRALAGHQVNEIELG
CCHHHHHCCCHHCCCCHHEECCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEC
DIAISNELVLHVLELKNNGPKPLHVPVAEHFQKTIRELQPLLAQHNLLLLPTGAHPWMDP
CEEECCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCC
NTETIRWPHGNHDIYNQFNSIFNCQGHGWANLQSMHVNLPYSNEEEFCQLHNATRLILPL
CCCEEECCCCCCHHHHHHHHHEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH
LPAIAASTPFLDGQATGLLDSRLYFYSRNQQRIPSISGDIIPEFIRTEREYQEQILEPMY
HHHHHCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RDISPYDPEGILQYQWLNSRAAIPKFDMKAIEIRILDSQECVEADIAIAKAINAILKYWQ
HCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
STSNFYLDNPCDTKSLKYVFDETIKNGLSCHIDNKRLLEQWQLPLQGMSVNTIWSLLIER
CCCCEEECCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCHHHHHHHHHHH
ISHELDRKQQLALELILKQGNLSERILKACSSCVNHDSLKQVYTQLAHCLLRNEQFTP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]