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The map label for this gene is 52840545

Identifier: 52840545

GI number: 52840545

Start: 345808

End: 347013

Strand: Reverse

Name: 52840545

Synonym: lpg0290

Alternate gene names: NA

Gene position: 347013-345808 (Counterclockwise)

Preceding gene: 52840546

Following gene: 52840544

Centisome position: 10.21

GC content: 40.88

Gene sequence:

>1206_bases
ATGAAAAGGATTTTTTTTGTTGTATTTTTGCTTTGTATAGAAACCGCTTGCAATACAGCAAAAAATAATCCTCTCCCCGC
GCAATTGGCAGATAAGGCCTTAGTGCCTGGATTTAAAGAGGTACGCACTGAATTCACCCGCAGTGATGACCCAATAATTA
AAAAGCAATCTCTTGAACGTGTAAAACAACTGGCTAAAGCTTACCCTGATACCATGTTCCATCAAAAAGGCTCTTTCAGC
TTGCTGATTATTTCAGGTGGTGGCGATTATGGTGCTTTTGGTGCTGGATTATTGAATGGGTGGACAAAATCCGGTTCTCG
ACCAACATTTACAACCGTGACAGGTATAAGTACTGGGGCATTGATAGCACCTTTAGCTTTTGCTGGCCCTAAATATGATG
CTACATTAAAAAAAGTGTATACAACCATTACCACGAAGGATGTACTGAGTAATAAGCCTGTATTATGGACTCTGTTAACA
GGAGGCAGCGCCCTTAAAGGAACCAAACCATTACAAGACCTGATTGCTCGTCATGTCGATGAAAAATTGCTTGATGACAT
TGCCAAAGGCTATTATCAAGGGCGACGGCTTTATGTAGGGACATCCAATCTTTACTCTCGAAAGCTGGTGGTATGGGATA
TGACCCGCATTGCGGCAAGCAAAAACCCCGAGAGAGTTCAGTTATTCCGAAAAATTCTACTTGCTTCTGCCAGCATTCCC
GTGGTCATGCCGCCTGTTTATTTTGATGTCATGGCCAACGGGAAACCCTACACAGAAATGCACGTTGATGGCTCAACAAC
GTTTGCGGTCTTTTTAAGTCGTCTTGGTTCTGATATCAAAACCGCGAAAAAACATTTCAAATTAAAACAAAAACCAAACG
TTAAAATTTATGTAATACGCAATAACCAGAATCAATTCCATTACAAAGTAATCAAACCCAAGTTATTGGTAATTGGCAAG
CGAGCGATAGAAAGTGTCACGGCATCCCAGGGGGCTGCCGATGTTATTTTTATCTATCTTTGTGCGCTTATAGAGGGAGT
TGATTTTAATTTGGCCAATGTTCCAAATGAGTTTGATTCGAACTCGGAGGAATTGTTTGATACTCAAAGAATGAATCAGT
TATATCAAATTGGTTATTCCAAAGCGGTAAAAGGTTACCCATGGCAAAAAATCCCTCCAGATGTAAGGGCTTTGCATGGT
GACTAA

Upstream 100 bases:

>100_bases
CATATGTTTTTTTGTGGTGCGTTAATATGAAAACAAACACTATCGCTTTTAATCCATTTTTTGAATAAAATTCGGGAAAA
CATTAATTTAAAGGAAAATT

Downstream 100 bases:

>100_bases
ATTGCCTGTGAACATGAAATGAAAATACCTGGAGTTCCTCATGGATACTACTCTGGATAACCCAGATTATTATATTAATA
GAGAATTTTCTGCTATTGCG

Product: lipoprotein

Products: NA

Alternate protein names: Lipoprotein; Patatin-Like Phospholipase Domain-Containing Protein; Phospholipase Patatin Family; Lipid Acyl Hydrolase Patatin-Like Domain; Patatin-Like Domain; Alpha/Beta Superfamily Hydrolase

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKRIFFVVFLLCIETACNTAKNNPLPAQLADKALVPGFKEVRTEFTRSDDPIIKKQSLERVKQLAKAYPDTMFHQKGSFS
LLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGALIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLT
GGSALKGTKPLQDLIARHVDEKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIRNNQNQFHYKVIKPKLLVIGK
RAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDSNSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHG
D

Sequences:

>Translated_401_residues
MKRIFFVVFLLCIETACNTAKNNPLPAQLADKALVPGFKEVRTEFTRSDDPIIKKQSLERVKQLAKAYPDTMFHQKGSFS
LLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGALIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLT
GGSALKGTKPLQDLIARHVDEKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIRNNQNQFHYKVIKPKLLVIGK
RAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDSNSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHG
D
>Mature_401_residues
MKRIFFVVFLLCIETACNTAKNNPLPAQLADKALVPGFKEVRTEFTRSDDPIIKKQSLERVKQLAKAYPDTMFHQKGSFS
LLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGALIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLT
GGSALKGTKPLQDLIARHVDEKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIRNNQNQFHYKVIKPKLLVIGK
RAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDSNSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHG
D

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44567; Mature: 44567

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIFFVVFLLCIETACNTAKNNPLPAQLADKALVPGFKEVRTEFTRSDDPIIKKQSLER
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHH
VKQLAKAYPDTMFHQKGSFSLLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGA
HHHHHHHCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCH
LIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLTGGSALKGTKPLQDLIARHVD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH
EKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
HHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCC
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIR
EEECCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEE
NNQNQFHYKVIKPKLLVIGKRAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDS
CCCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHGD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MKRIFFVVFLLCIETACNTAKNNPLPAQLADKALVPGFKEVRTEFTRSDDPIIKKQSLER
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHH
VKQLAKAYPDTMFHQKGSFSLLIISGGGDYGAFGAGLLNGWTKSGSRPTFTTVTGISTGA
HHHHHHHCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCH
LIAPLAFAGPKYDATLKKVYTTITTKDVLSNKPVLWTLLTGGSALKGTKPLQDLIARHVD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH
EKLLDDIAKGYYQGRRLYVGTSNLYSRKLVVWDMTRIAASKNPERVQLFRKILLASASIP
HHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCCC
VVMPPVYFDVMANGKPYTEMHVDGSTTFAVFLSRLGSDIKTAKKHFKLKQKPNVKIYVIR
EEECCCEEEEECCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEEE
NNQNQFHYKVIKPKLLVIGKRAIESVTASQGAADVIFIYLCALIEGVDFNLANVPNEFDS
CCCCCEEEEEECCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NSEELFDTQRMNQLYQIGYSKAVKGYPWQKIPPDVRALHGD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA