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The map label for this gene is efp

Identifier: 52840542

GI number: 52840542

Start: 342005

End: 342622

Strand: Reverse

Name: efp

Synonym: lpg0287

Alternate gene names: 52840542

Gene position: 342622-342005 (Counterclockwise)

Preceding gene: 52840544

Following gene: 52840539

Centisome position: 10.08

GC content: 43.04

Gene sequence:

>618_bases
GTGCGAACTTTAGCGAAAATACAGCAAAATCTCAACTATGGAGCAGAAATGGCAGTCTATAGCACAAATGAATTTAAAAA
CGGCTTAAAAGTAATGGTTGATGATGCTCCGTGCAGCATTCTTGACTGTGAATTTGTAAAACCTGGAAAAGGTCAAGCAT
TTACCCGTATTAAAATTCGCAATCTAAAAACCGGGCGCGTTGTGGAACGTACCTTTAAATCTGGGGACACCTTACCATCT
GCTGATGTGGCTGACGTAGAAATGCAGTATCTATACAATGATGGGGAGCATTGGCATTTTATGGTTCCAGATACGTTTGA
ACAATATGCCGTGACTGAAAACGTATTAGCCGATGCAGCACAATGGTTAAAGGAACAGGACGTTTGTGTAGTTACTCTAT
GGAACAATGAACCTATACAGGTGACTCCACCCAATTTTGTCATTTTGGCAATCACCGAAACAGATCCTGGATTAAAAGGA
GACACTTCTGGCGGAGGCGGAAAGCCAGCCACATTGGAAACAGGTGCCGTGGTTCGTGTACCATTGTTTGTTCAAACTGG
CGAACTGATTAAGGTAGACACGCGCAAAGGCGAATATGTGTCTCGCGCTAAAGAGTAA

Upstream 100 bases:

>100_bases
AGGAAATCTAATAAATCAGTCGTTGAAGTAAATCCTTGCGCCAAAATTTTTTGCCAACTCAAAGAGGTATCTCGCATTAA
AGTTACAGACTTGATAAACT

Downstream 100 bases:

>100_bases
TTATCAACAGAAATAGCCTTCATTTGGTTTGGAGGCTTGTCTTCTCTGGAAATTAGAAATCGTAATCTCCACCCCAATAT
CCATAAGGGCCTACAAAAGA

Product: elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRTLAKIQQNLNYGAEMAVYSTNEFKNGLKVMVDDAPCSILDCEFVKPGKGQAFTRIKIRNLKTGRVVERTFKSGDTLPS
ADVADVEMQYLYNDGEHWHFMVPDTFEQYAVTENVLADAAQWLKEQDVCVVTLWNNEPIQVTPPNFVILAITETDPGLKG
DTSGGGGKPATLETGAVVRVPLFVQTGELIKVDTRKGEYVSRAKE

Sequences:

>Translated_205_residues
MRTLAKIQQNLNYGAEMAVYSTNEFKNGLKVMVDDAPCSILDCEFVKPGKGQAFTRIKIRNLKTGRVVERTFKSGDTLPS
ADVADVEMQYLYNDGEHWHFMVPDTFEQYAVTENVLADAAQWLKEQDVCVVTLWNNEPIQVTPPNFVILAITETDPGLKG
DTSGGGGKPATLETGAVVRVPLFVQTGELIKVDTRKGEYVSRAKE
>Mature_205_residues
MRTLAKIQQNLNYGAEMAVYSTNEFKNGLKVMVDDAPCSILDCEFVKPGKGQAFTRIKIRNLKTGRVVERTFKSGDTLPS
ADVADVEMQYLYNDGEHWHFMVPDTFEQYAVTENVLADAAQWLKEQDVCVVTLWNNEPIQVTPPNFVILAITETDPGLKG
DTSGGGGKPATLETGAVVRVPLFVQTGELIKVDTRKGEYVSRAKE

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI1790590, Length=188, Percent_Identity=63.2978723404255, Blast_Score=254, Evalue=2e-69,
Organism=Escherichia coli, GI87082061, Length=186, Percent_Identity=29.5698924731183, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 22719; Mature: 22719

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLAKIQQNLNYGAEMAVYSTNEFKNGLKVMVDDAPCSILDCEFVKPGKGQAFTRIKIR
CCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEEE
NLKTGRVVERTFKSGDTLPSADVADVEMQYLYNDGEHWHFMVPDTFEQYAVTENVLADAA
CCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH
QWLKEQDVCVVTLWNNEPIQVTPPNFVILAITETDPGLKGDTSGGGGKPATLETGAVVRV
HHHCCCCEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEE
PLFVQTGELIKVDTRKGEYVSRAKE
EEEEECCCEEEEECCCCCHHHHCCC
>Mature Secondary Structure
MRTLAKIQQNLNYGAEMAVYSTNEFKNGLKVMVDDAPCSILDCEFVKPGKGQAFTRIKIR
CCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEEE
NLKTGRVVERTFKSGDTLPSADVADVEMQYLYNDGEHWHFMVPDTFEQYAVTENVLADAA
CCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHH
QWLKEQDVCVVTLWNNEPIQVTPPNFVILAITETDPGLKGDTSGGGGKPATLETGAVVRV
HHHCCCCEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEE
PLFVQTGELIKVDTRKGEYVSRAKE
EEEEECCCEEEEECCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA