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The map label for this gene is yjbQ [C]

Identifier: 52840416

GI number: 52840416

Start: 193391

End: 193852

Strand: Reverse

Name: yjbQ [C]

Synonym: lpg0161

Alternate gene names: 52840416

Gene position: 193852-193391 (Counterclockwise)

Preceding gene: 52840419

Following gene: 52840414

Centisome position: 5.71

GC content: 39.61

Gene sequence:

>462_bases
ATGTTGCCAGTTATTGATTTATGCCCAAATCATTGTCAAAACATGAAAACATACCGAAAAGAACTATGGTTTAATATCCC
AGAGCGTATGGGATTTATCAATATCACAGATAAAGTCATTGAATGCTTAAAAGAAAGTCGTATTCAAGAGGGTTTAATAT
TGGTTAATGCCATGCACATCACCGCTTCTGTATTCATCAATGATGATGAAAGCGGCTTGCATCAGGATTATAAAAAATGG
CTTGAGCGGATAGCACCCCATCAACCCATTGAGCAATACCGCCATAATGACACTGGTGAGGATAATGCTGATGCCCATAT
CAAACGCCAAATCATGGGGCGAGAAGTGGTTGTCGCTATTACAGAAGGAAGACTGGATTTTGGTCCATGGGAACAAATAT
TCTATGGTGAGTTTGACGGCCACCGTGATAAAAGAGTCCTAGTAAAGATTATCGGTCAATAA

Upstream 100 bases:

>100_bases
TGTTCTCTCCACAACCCCATGATTCATGCCTTAAGACCCAGAAGAGTTCTCTAATAAAGATTAAATTGTCATCCATTTGA
AATAAAACCAGGAATGCTAT

Downstream 100 bases:

>100_bases
AGCATGACTTGAATGGATCATGAGTAATTAAAGCATAAAAGGTCCGGTTTTTCCTTTTTCCTTAATAAGCTCTGTGCCCT
AATTCGCGCCAAAGAAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MLPVIDLCPNHCQNMKTYRKELWFNIPERMGFINITDKVIECLKESRIQEGLILVNAMHITASVFINDDESGLHQDYKKW
LERIAPHQPIEQYRHNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIFYGEFDGHRDKRVLVKIIGQ

Sequences:

>Translated_153_residues
MLPVIDLCPNHCQNMKTYRKELWFNIPERMGFINITDKVIECLKESRIQEGLILVNAMHITASVFINDDESGLHQDYKKW
LERIAPHQPIEQYRHNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIFYGEFDGHRDKRVLVKIIGQ
>Mature_153_residues
MLPVIDLCPNHCQNMKTYRKELWFNIPERMGFINITDKVIECLKESRIQEGLILVNAMHITASVFINDDESGLHQDYKKW
LERIAPHQPIEQYRHNDTGEDNADAHIKRQIMGREVVVAITEGRLDFGPWEQIFYGEFDGHRDKRVLVKIIGQ

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=136, Percent_Identity=27.2058823529412, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 17930; Mature: 17930

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVIDLCPNHCQNMKTYRKELWFNIPERMGFINITDKVIECLKESRIQEGLILVNAMHI
CCCCHHCCHHHHHHHHHHHHHHHCCCHHHCCEEEHHHHHHHHHHHHHHHCCEEEEEEEEE
TASVFINDDESGLHQDYKKWLERIAPHQPIEQYRHNDTGEDNADAHIKRQIMGREVVVAI
EEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEE
TEGRLDFGPWEQIFYGEFDGHRDKRVLVKIIGQ
ECCCCCCCCHHHHEECCCCCCCCHHHHHHEECC
>Mature Secondary Structure
MLPVIDLCPNHCQNMKTYRKELWFNIPERMGFINITDKVIECLKESRIQEGLILVNAMHI
CCCCHHCCHHHHHHHHHHHHHHHCCCHHHCCEEEHHHHHHHHHHHHHHHCCEEEEEEEEE
TASVFINDDESGLHQDYKKWLERIAPHQPIEQYRHNDTGEDNADAHIKRQIMGREVVVAI
EEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEE
TEGRLDFGPWEQIFYGEFDGHRDKRVLVKIIGQ
ECCCCCCCCHHHHEECCCCCCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]