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The map label for this gene is nisX1 [H]

Identifier: 52840401

GI number: 52840401

Start: 176652

End: 176885

Strand: Reverse

Name: nisX1 [H]

Synonym: lpg0146

Alternate gene names: 52840401

Gene position: 176885-176652 (Counterclockwise)

Preceding gene: 52840402

Following gene: 52840400

Centisome position: 5.21

GC content: 36.75

Gene sequence:

>234_bases
ATGAGCAAAAAAGGTGACTGCTGGGACAATAGCGTTGCTGAGAGTTTTTTCAGCCGCTTGAAGGATGAATTAGTTCATTG
GCGTAATTATCAAACCAGACGGGAGGCAAAACAAGATATTCTAGATTACATGACTATGTTTTATAACAATCAAAAATTGC
ATTCGTCTTTGGATTATCTAAGTCCGAATCAATTTGAAAATCGGTACTGGGGGTTAATGAAAAAAGTGGCTTAA

Upstream 100 bases:

>100_bases
AAAGCCAAAAGCAGGCCTTATTGTGCATTCCGACAGGGGCTCACAATATGCCAGTAAACAATATCGCAGCCTTCTCAATC
AACATGGCCTTGTGGGCAGC

Downstream 100 bases:

>100_bases
CTGGGGTGTACAAATTTGCTTGACCTCGTCAAATACCCCTATTATCGTTGTAACAATAAACAACGTGGCTTAACGAAGAA
AAACATTAGTCGAGAAGTAT

Product: transposase B, TnpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSKKGDCWDNSVAESFFSRLKDELVHWRNYQTRREAKQDILDYMTMFYNNQKLHSSLDYLSPNQFENRYWGLMKKVA

Sequences:

>Translated_77_residues
MSKKGDCWDNSVAESFFSRLKDELVHWRNYQTRREAKQDILDYMTMFYNNQKLHSSLDYLSPNQFENRYWGLMKKVA
>Mature_76_residues
SKKGDCWDNSVAESFFSRLKDELVHWRNYQTRREAKQDILDYMTMFYNNQKLHSSLDYLSPNQFENRYWGLMKKVA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=68, Percent_Identity=41.1764705882353, Blast_Score=60, Evalue=3e-11,
Organism=Escherichia coli, GI1787263, Length=68, Percent_Identity=41.1764705882353, Blast_Score=60, Evalue=3e-11,
Organism=Escherichia coli, GI1786753, Length=68, Percent_Identity=41.1764705882353, Blast_Score=60, Evalue=3e-11,
Organism=Escherichia coli, GI1786570, Length=68, Percent_Identity=41.1764705882353, Blast_Score=60, Evalue=3e-11,
Organism=Escherichia coli, GI1786490, Length=68, Percent_Identity=41.1764705882353, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 9405; Mature: 9273

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKGDCWDNSVAESFFSRLKDELVHWRNYQTRREAKQDILDYMTMFYNNQKLHSSLDYL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
SPNQFENRYWGLMKKVA
CCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKGDCWDNSVAESFFSRLKDELVHWRNYQTRREAKQDILDYMTMFYNNQKLHSSLDYL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
SPNQFENRYWGLMKKVA
CCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]