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The map label for this gene is 52840362

Identifier: 52840362

GI number: 52840362

Start: 122242

End: 123048

Strand: Reverse

Name: 52840362

Synonym: lpg0107

Alternate gene names: NA

Gene position: 123048-122242 (Counterclockwise)

Preceding gene: 52840364

Following gene: 52840361

Centisome position: 3.62

GC content: 34.82

Gene sequence:

>807_bases
ATGGAATGCTTAAGTTTCTGTGTGGCCAAAACCATAGACTTGACTCGTCTTGATCTTCATCTAAAAAACGTCTCTAAGGA
ATTTAGTGCTGTAAAAACCCGAGATGTAATAAGATTAAATTCTCATAGAAACAAAGATCACACCCTGTTCATTTTTAAAA
ATGGAACTGTCGTATCTTGGGGTGTAAAAAGATACCAAATCCACGAATACCTGGATATTATTAAACTGCTTGTAGACAAA
CCTGTAGCACTTTTGGTGCATGATGAATTTCATTATCAAATTGGTGATAAAACAGCCATAGAACCACATGGTTTTTATGA
TGTGGATTGCCTGACCATTGAAGAAGACAGTGATGAACTAAAGCTCAGTTTGTCTTACGGCTTTTCTCAATCTGTAAAAT
TACAGTATTTCGAAACCATTATTGACGCATTGATTGAAAAATATAATCCGCTGATTCAGGCCTTATCTCATAAAGGAGAA
ATGCCTATAAGCAGAAAACAAATTCAACAAGTTATTGGTGAAATTTTAGGTGCCAAAAGCGAGTTGAATTTGATTAGTAA
TTTCTTATACCACCCCAAATATTTTTGGCAACACCCCACTCTAGAAGAGCATTTTTCCATGCTTGAGCGCTATTTACATA
TACAAAGACGCGTCAATGCCATTAACCATCGTCTTGATACGCTTAATGAAATTTTCGACATGTTCAATGGTTATTTGGAA
AGTCGCCATGGCCATCACTTGGAAATAATTATTATTGTATTAATCGCAGTAGAAATTATAATTGCGGTTATGAATTTCCA
TTTTTAG

Upstream 100 bases:

>100_bases
AATAAACCTGGAATTTCATGTATACTGTAAGCTAATAGACAGCGTTTGCTAAAATTATTTACTTTGCAAACGCTTTTTTC
ATTGTTGGGTTATTAAAATC

Downstream 100 bases:

>100_bases
GGTTTTTCCCTTAATTTATGCCCACTCTAAAATCCTATTTTCTCAAAGACACCTCTTTGCGCACGGAAATACTTGCTGGA
GCAACGACCTTCCTTACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHRNKDHTLFIFKNGTVVSWGVKRYQIHEYLDIIKLLVDK
PVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDELKLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGE
MPISRKQIQQVIGEILGAKSELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
SRHGHHLEIIIIVLIAVEIIIAVMNFHF

Sequences:

>Translated_268_residues
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHRNKDHTLFIFKNGTVVSWGVKRYQIHEYLDIIKLLVDK
PVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDELKLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGE
MPISRKQIQQVIGEILGAKSELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
SRHGHHLEIIIIVLIAVEIIIAVMNFHF
>Mature_268_residues
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHRNKDHTLFIFKNGTVVSWGVKRYQIHEYLDIIKLLVDK
PVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDELKLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGE
MPISRKQIQQVIGEILGAKSELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
SRHGHHLEIIIIVLIAVEIIIAVMNFHF

Specific function: Unknown

COG id: COG1723

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI157388927, Length=292, Percent_Identity=25.6849315068493, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71996861, Length=211, Percent_Identity=28.436018957346, Blast_Score=92, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320203, Length=240, Percent_Identity=30.8333333333333, Blast_Score=116, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6320488, Length=248, Percent_Identity=25.8064516129032, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321163, Length=237, Percent_Identity=26.1603375527426, Blast_Score=76, Evalue=6e-15,
Organism=Drosophila melanogaster, GI18859701, Length=239, Percent_Identity=25.5230125523013, Blast_Score=82, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31403; Mature: 31403

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHRNKDHTLFIFKNGTVVSW
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCEEEEE
GVKRYQIHEYLDIIKLLVDKPVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDEL
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCCE
KLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGEMPISRKQIQQVIGEILGAKS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH
ELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
HHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRHGHHLEIIIIVLIAVEIIIAVMNFHF
CCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MECLSFCVAKTIDLTRLDLHLKNVSKEFSAVKTRDVIRLNSHRNKDHTLFIFKNGTVVSW
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCEEEEE
GVKRYQIHEYLDIIKLLVDKPVALLVHDEFHYQIGDKTAIEPHGFYDVDCLTIEEDSDEL
CHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEEEECCCCCE
KLSLSYGFSQSVKLQYFETIIDALIEKYNPLIQALSHKGEMPISRKQIQQVIGEILGAKS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH
ELNLISNFLYHPKYFWQHPTLEEHFSMLERYLHIQRRVNAINHRLDTLNEIFDMFNGYLE
HHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRHGHHLEIIIIVLIAVEIIIAVMNFHF
CCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA