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The map label for this gene is yneE [C]

Identifier: 52840299

GI number: 52840299

Start: 51460

End: 52320

Strand: Reverse

Name: yneE [C]

Synonym: lpg0043

Alternate gene names: 52840299

Gene position: 52320-51460 (Counterclockwise)

Preceding gene: 52840301

Following gene: 52840296

Centisome position: 1.54

GC content: 36.24

Gene sequence:

>861_bases
ATGGTTAGCTATTTATTTTCAGAAGTACATTTCACCCATGCCCTAAAGAAAGTACTTGGAATTAGCGTTTTGGTTGGTGT
TTACAGCGCCATTATTTATTTTTGGTTTGAGCAAGATAACTTGCATTCCAGTAACTGGCTATCCTATTCGCAAAGCGTAT
TTGGCATCATTTTAGGTTTGCTTTTGGTTTTTAGAAGCAATCGGGCTTATGAACGTTGGTGGGAAGCGAGAACCCTGTGG
GGTCAATTAGTCAATGCCAGTCGTAATTTAGCAATAAAAATCAGGATATTGTTATCACCCAATGCCGATGAAGCTAAAAA
ATTCTCTGAACTCATCAATACGTTTTGTGAAGTATTGGCCATCCATTTGAGGCAAAAAAGTACTCGGGATGATTTTAAAA
AATTTTTAAAAATGGTGAGTCTTCCCAATCATGTGCCGTCTTATGTTGCACAAGAACTGTATCGTGAGCTTTCTGAGAAG
ACCAAAGCATCGAAAAGATTGAATCTATGGTTATTGGATAACGAATTTAGCAAATTTATGGATATTTGCGGCGGTTGCGA
GCGTATTAAAAATACATTTATCTCGCTTTCATTTCGGGTTTTTGTAAAGCATGTATTCATTATTTTTATCCTTTTTTTAC
CTTGCAGCCTAATCGATACGCTTGGAGTTTGGGCAATACCTGCTACCATTATTATTACCTATTTAATCATCGCCATAGAG
GGAATTGCTCGAAATTTAGAAGAACCATTTGGTTTAACAGAAGATCACTTAAACCTTAGTGCAATAACAGAAAGTATTAG
AGAAAGCGTCAATGAAGTCTTGCTAGGACAGAAATCTAATGAAGAATCCAATTCAATTTAG

Upstream 100 bases:

>100_bases
CTGGTTATTACTTATTTTGCTCCCACTTTTTTGACAAAGCACTTTATAGAAAGATCAGTTTCTATTATTCTGGAAAAACT
AAACAATCAAATGGACTGCC

Downstream 100 bases:

>100_bases
TATGGATTATAATTAATAAAAGTTTTTCTACTTAAATAACAGGGAGTCATTATAATGGAATGTAAATGCAATCAATGTGG
TATGGGCGTAAAAAATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MVSYLFSEVHFTHALKKVLGISVLVGVYSAIIYFWFEQDNLHSSNWLSYSQSVFGIILGLLLVFRSNRAYERWWEARTLW
GQLVNASRNLAIKIRILLSPNADEAKKFSELINTFCEVLAIHLRQKSTRDDFKKFLKMVSLPNHVPSYVAQELYRELSEK
TKASKRLNLWLLDNEFSKFMDICGGCERIKNTFISLSFRVFVKHVFIIFILFLPCSLIDTLGVWAIPATIIITYLIIAIE
GIARNLEEPFGLTEDHLNLSAITESIRESVNEVLLGQKSNEESNSI

Sequences:

>Translated_286_residues
MVSYLFSEVHFTHALKKVLGISVLVGVYSAIIYFWFEQDNLHSSNWLSYSQSVFGIILGLLLVFRSNRAYERWWEARTLW
GQLVNASRNLAIKIRILLSPNADEAKKFSELINTFCEVLAIHLRQKSTRDDFKKFLKMVSLPNHVPSYVAQELYRELSEK
TKASKRLNLWLLDNEFSKFMDICGGCERIKNTFISLSFRVFVKHVFIIFILFLPCSLIDTLGVWAIPATIIITYLIIAIE
GIARNLEEPFGLTEDHLNLSAITESIRESVNEVLLGQKSNEESNSI
>Mature_286_residues
MVSYLFSEVHFTHALKKVLGISVLVGVYSAIIYFWFEQDNLHSSNWLSYSQSVFGIILGLLLVFRSNRAYERWWEARTLW
GQLVNASRNLAIKIRILLSPNADEAKKFSELINTFCEVLAIHLRQKSTRDDFKKFLKMVSLPNHVPSYVAQELYRELSEK
TKASKRLNLWLLDNEFSKFMDICGGCERIKNTFISLSFRVFVKHVFIIFILFLPCSLIDTLGVWAIPATIIITYLIIAIE
GIARNLEEPFGLTEDHLNLSAITESIRESVNEVLLGQKSNEESNSI

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=249, Percent_Identity=27.3092369477912, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 32904; Mature: 32904

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSYLFSEVHFTHALKKVLGISVLVGVYSAIIYFWFEQDNLHSSNWLSYSQSVFGIILGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LLVFRSNRAYERWWEARTLWGQLVNASRNLAIKIRILLSPNADEAKKFSELINTFCEVLA
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
IHLRQKSTRDDFKKFLKMVSLPNHVPSYVAQELYRELSEKTKASKRLNLWLLDNEFSKFM
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHH
DICGGCERIKNTFISLSFRVFVKHVFIIFILFLPCSLIDTLGVWAIPATIIITYLIIAIE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIARNLEEPFGLTEDHLNLSAITESIRESVNEVLLGQKSNEESNSI
HHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVSYLFSEVHFTHALKKVLGISVLVGVYSAIIYFWFEQDNLHSSNWLSYSQSVFGIILGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LLVFRSNRAYERWWEARTLWGQLVNASRNLAIKIRILLSPNADEAKKFSELINTFCEVLA
HHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
IHLRQKSTRDDFKKFLKMVSLPNHVPSYVAQELYRELSEKTKASKRLNLWLLDNEFSKFM
HHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCHHHHHH
DICGGCERIKNTFISLSFRVFVKHVFIIFILFLPCSLIDTLGVWAIPATIIITYLIIAIE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIARNLEEPFGLTEDHLNLSAITESIRESVNEVLLGQKSNEESNSI
HHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]