Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39998541

Identifier: 39998541

GI number: 39998541

Start: 3799899

End: 3800030

Strand: Reverse

Name: 39998541

Synonym: GSU3452

Alternate gene names: NA

Gene position: 3800030-3799899 (Counterclockwise)

Preceding gene: 39998542

Following gene: 39998540

Centisome position: 99.63

GC content: 69.7

Gene sequence:

>132_bases
GTGGTCTACCGCCAGCAGCAGGCCATCGACCGGTTGGAAGACGAGCTGAAGGCCCTGCGGACGCAGTTCCTGGCGGTGGC
GCCGTCGCCAACCCGCCCGCCCGACGAGGAAACGCCGCCTCCCCACTACTGA

Upstream 100 bases:

>100_bases
TCATTCCGGCCCAAGCATCGAACCAGCCATGGAAAACCGCATCACCGACATCGAGATCCACCTTTCGCACCTGGAGCACA
CCATCCAGGAACTGAACGAG

Downstream 100 bases:

>100_bases
CAGCCATTCATGGGGGCCCCATGGAGCATCCCCTCATCCGGATCGTCATCCTGGCCGTGCTCGCCTATGTGGGGTACGCA
CTGCTCTGTTTCCTGGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 43

Protein sequence:

>43_residues
MVYRQQQAIDRLEDELKALRTQFLAVAPSPTRPPDEETPPPHY

Sequences:

>Translated_43_residues
MVYRQQQAIDRLEDELKALRTQFLAVAPSPTRPPDEETPPPHY
>Mature_43_residues
MVYRQQQAIDRLEDELKALRTQFLAVAPSPTRPPDEETPPPHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5006; Mature: 5006

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYRQQQAIDRLEDELKALRTQFLAVAPSPTRPPDEETPPPHY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVYRQQQAIDRLEDELKALRTQFLAVAPSPTRPPDEETPPPHY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA