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The map label for this gene is fd1 [H]

Identifier: 39998538

GI number: 39998538

Start: 3793890

End: 3794078

Strand: Reverse

Name: fd1 [H]

Synonym: GSU3449

Alternate gene names: 39998538

Gene position: 3794078-3793890 (Counterclockwise)

Preceding gene: 39998539

Following gene: 39998537

Centisome position: 99.47

GC content: 57.14

Gene sequence:

>189_bases
ATGAGCCGTAATCTGTACGTCGAGAAAGATGTCTGTATCAGCTGCGGTCTTTGTGTTGAGACGGTTCCGGAGGTGTTCCG
GTTTGACGACGACAACCTGGCCGAGGTGTACGATCCGGCCGGCGCTGCCGAGGAAAAGATCCAGGAGGCCGTTGACACCT
GTCCGGTCTCCTGCATCCATTGGGGGTAA

Upstream 100 bases:

>100_bases
ACCCGGAGCTGTTTCGTTAAGATCGTGCCGGAGAAGAACATCGTTACCCCCAGGAGCACCGAGTGACGGCATCCCCCTGA
GGATGCAAGGAGGAACGACC

Downstream 100 bases:

>100_bases
CAGCCCACACATCCCACGATACGGGAAGACACATGATTATCCTGATTCTCAATTGCCGGGGCTTTTCCATCCACTTCCAG
CTCTTCGACTGGTCTACGCG

Product: ferredoxin family protein

Products: NA

Alternate protein names: Ferredoxin I; FdI [H]

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MSRNLYVEKDVCISCGLCVETVPEVFRFDDDNLAEVYDPAGAAEEKIQEAVDTCPVSCIHWG

Sequences:

>Translated_62_residues
MSRNLYVEKDVCISCGLCVETVPEVFRFDDDNLAEVYDPAGAAEEKIQEAVDTCPVSCIHWG
>Mature_61_residues
SRNLYVEKDVCISCGLCVETVPEVFRFDDDNLAEVYDPAGAAEEKIQEAVDTCPVSCIHWG

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1141

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001080
- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6882; Mature: 6751

Theoretical pI: Translated: 3.85; Mature: 3.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
8.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNLYVEKDVCISCGLCVETVPEVFRFDDDNLAEVYDPAGAAEEKIQEAVDTCPVSCIH
CCCCCCCCCCCCEECCCHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEE
WG
CC
>Mature Secondary Structure 
SRNLYVEKDVCISCGLCVETVPEVFRFDDDNLAEVYDPAGAAEEKIQEAVDTCPVSCIH
CCCCCCCCCCCEECCCHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEE
WG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7126685; 7803404; 9533888 [H]