| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998433
Identifier: 39998433
GI number: 39998433
Start: 3672332
End: 3674635
Strand: Direct
Name: 39998433
Synonym: GSU3344
Alternate gene names: NA
Gene position: 3672332-3674635 (Clockwise)
Preceding gene: 39998432
Following gene: 39998434
Centisome position: 96.28
GC content: 59.03
Gene sequence:
>2304_bases ATGACGAAATCCATGGACACCATATCCCGCGCGCTCCAGCATATGGACCGGAGCGTCAACGCCTGGGACCACCGGGGTTC CGTTCCCTTCGAGGAATTCCTGCGGATTCTCGTGGCCAACCCGGCACTGGTGCTCCGCAACGTCTTCCAGGTCTTTCACG ACATGGTCATGAGCCATATCGGCGTCGGTATCGACGAGACTCCGGACGACCCCGAGTCTATCCACTACGTCTCCTATGAC TGCCGCAAGCTCTTCGTGGAAGGGTCCGACACCCCGTTTTTCGCCGACCGGCTCTTCGCCAACCGCCTCGTGAGCCTGGT GGAAACCTGGAAGCGGGGCGCTCAGCAGAACAAGATTTATGTCTTCGAGGGGCCGCCCGGCAGCGGCAAGAGCACCTTCC TCAACAACCTGCTCATGAAGTTCGAGACCTACGCCAACACGGCAGAGGGCGCCCGCCACGAGGCGGTCTGGCGCCTGGAC CGGCAGACTCTGGGAGGTTTCACCCGCCATGAAACCGCGGTCTTTCTGGACAAGCTTTCAAAACTCCTGGAGGAATACGA GTTCAACCAGGAAGAGCTCTTCGAGGCCGAAGGAGCCATGCCTGCGGGGGACGACTTCGTGGAGATCCCCTGCCCCTCCC ACGACAACCCGGTCCTCGTCATTCCCAAGCAGTTGCGGCGCCAGTTCTTCGATGACCTCTTCAAAAACGACGAGATGAAG TGGCGCCTCTTCACCGAAAAAGAATTCGACTGGGTCTTCCGCGGCACCTGCTGCACCGTCTGCAGCTCCATTTACCAGGC TCTCCTGGCCCGGCTCAAGAGCCCCGCGGCGGTGCTCCGGATGCTCCACGCTCGCCCCTATCACATCAACCGCCGTATGG GCGAAGGGATCAGCGTCTTCAACCCCGGCGACAAGCCGGTGCGCCAGAACGTCTTCACCAACGAGATGCTCCAGAGCCGC ATCAATGCCGTGCTGCGGGACAGCAACCAGGTAAAGTATCTCTTCTCCCAGTACGCCAAGACCAACAACGGCATCTATGC CCTCATGGACATCAAGGGGCACAATACTGACCGGCTCATCGAGCTCCACAACATCGTGAGCGAAGGGGTCCACAAGGTGG ACGACCTGGAGGAGAATGTAGACTCCCTCTTCCTGGCCCTCATGAACCCAGAGGACAAGAGCAACATCGAGAGCTACCAG TCGTTCCTCGACCGGATCCAGTACATAAAGATACCCTACGTGCTCGACCTGAACACCGAGGTGGAGATCTACCGCAACAT CTTCGGCAAGCAGATCGACCACAGCTTCCTGCCGCGGGTGCTCCACAACTTCGCCCGGATCATCATTTCATCGCGCATGA ACGAACGCTCCTACGCCATGAACGACTGGATCCCGGAGCCCCACCGCTACAGCATGTACTGCGATTTCAACCTCCAGCTC CTCAGGATGGAAATCTACACGGGGCACTTCCCCGCGTGGCTCACGGAGGAAGACCGCAAGAAGCTCACTGCCAAGCGCCG GCGCATGATCATCGCCGAAAGCGAGCAGGAGGGGGATCGGGGCTTCTCCGGGCGGGATGCCATCAAGATCTTCGGCGACT TCTACTCCACCTATGCCCGCAAGGACAAGCTCATCACCATGACCACCCTCACCTCCTACTTCACCAAGGTACGGCCGGAG CTGGGGAAGCAGCTTCCCGCCGGCTTCCTCGAATCACTCATGCGCCTCTACAACTTCACCATCCTGCAGGAGGTGAAGGA ATCGCTCTACTACTTCAACGAAGAACAGATTTCACGGGACGTGCAGAACTACCTCTTCGCCATCAACTTCGAGCCGGTGG TGGACGAGACATGCACCTGGACGGGGGACAAGCTCCACATCACCGAAACCTACCTGGAATCCATCGAAAACCGGCTCTTG GGAGCAGGCGCCGAGCGGGAAAAGCGGCTCGTCTTCCGGGTGGCAACCCAGAAGGAGTACGCTTCCCGCACCCTGGCCCA GGAAATCCTCTTCGAAGGGAAAAAGATTACGGATACTGCCCTGTACCACGATCTCTTCGACCGCTACGTCTTCAATCTCA AGGAAAAGGCCCTGGACCCGTTCCTGGAGAACGAGAACTTCCGGCGCGCCATCAAGGACTTCGGCCGGGAGGAGTTCAAG ACCTACGACAAGCGGATCCGGGACGACGTCACCTTCCTCATCAACAACCTGGGAACAAAGTACCGCTACACCCGTAACGG CGCCAAGGAAGTCTGCATCTACGTCATCGACAATGACCTGGCCAAGACCTACGGCCGCGCCTGA
Upstream 100 bases:
>100_bases GAAGCCCCCCGAGCGGCAGCAAAAAATCCACTGGCGACGCTACGTCTACACCATGGAGGACCGGAAGCTTTCGCGGACCC TCCTGTAAGGACCAGCCCCC
Downstream 100 bases:
>100_bases ACCCACTCTCACCATCAGGAGGACCAAACCCCATGACCCTGCGCATCCTGCCGTTTGCCCTGCTCCTCACCTGCCTGGCG GCACCCGGCGTATTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Sensory Box Histidine Kinase/Response Regulator Protein; AAA Family ATPase
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MTKSMDTISRALQHMDRSVNAWDHRGSVPFEEFLRILVANPALVLRNVFQVFHDMVMSHIGVGIDETPDDPESIHYVSYD CRKLFVEGSDTPFFADRLFANRLVSLVETWKRGAQQNKIYVFEGPPGSGKSTFLNNLLMKFETYANTAEGARHEAVWRLD RQTLGGFTRHETAVFLDKLSKLLEEYEFNQEELFEAEGAMPAGDDFVEIPCPSHDNPVLVIPKQLRRQFFDDLFKNDEMK WRLFTEKEFDWVFRGTCCTVCSSIYQALLARLKSPAAVLRMLHARPYHINRRMGEGISVFNPGDKPVRQNVFTNEMLQSR INAVLRDSNQVKYLFSQYAKTNNGIYALMDIKGHNTDRLIELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIESYQ SFLDRIQYIKIPYVLDLNTEVEIYRNIFGKQIDHSFLPRVLHNFARIIISSRMNERSYAMNDWIPEPHRYSMYCDFNLQL LRMEIYTGHFPAWLTEEDRKKLTAKRRRMIIAESEQEGDRGFSGRDAIKIFGDFYSTYARKDKLITMTTLTSYFTKVRPE LGKQLPAGFLESLMRLYNFTILQEVKESLYYFNEEQISRDVQNYLFAINFEPVVDETCTWTGDKLHITETYLESIENRLL GAGAEREKRLVFRVATQKEYASRTLAQEILFEGKKITDTALYHDLFDRYVFNLKEKALDPFLENENFRRAIKDFGREEFK TYDKRIRDDVTFLINNLGTKYRYTRNGAKEVCIYVIDNDLAKTYGRA
Sequences:
>Translated_767_residues MTKSMDTISRALQHMDRSVNAWDHRGSVPFEEFLRILVANPALVLRNVFQVFHDMVMSHIGVGIDETPDDPESIHYVSYD CRKLFVEGSDTPFFADRLFANRLVSLVETWKRGAQQNKIYVFEGPPGSGKSTFLNNLLMKFETYANTAEGARHEAVWRLD RQTLGGFTRHETAVFLDKLSKLLEEYEFNQEELFEAEGAMPAGDDFVEIPCPSHDNPVLVIPKQLRRQFFDDLFKNDEMK WRLFTEKEFDWVFRGTCCTVCSSIYQALLARLKSPAAVLRMLHARPYHINRRMGEGISVFNPGDKPVRQNVFTNEMLQSR INAVLRDSNQVKYLFSQYAKTNNGIYALMDIKGHNTDRLIELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIESYQ SFLDRIQYIKIPYVLDLNTEVEIYRNIFGKQIDHSFLPRVLHNFARIIISSRMNERSYAMNDWIPEPHRYSMYCDFNLQL LRMEIYTGHFPAWLTEEDRKKLTAKRRRMIIAESEQEGDRGFSGRDAIKIFGDFYSTYARKDKLITMTTLTSYFTKVRPE LGKQLPAGFLESLMRLYNFTILQEVKESLYYFNEEQISRDVQNYLFAINFEPVVDETCTWTGDKLHITETYLESIENRLL GAGAEREKRLVFRVATQKEYASRTLAQEILFEGKKITDTALYHDLFDRYVFNLKEKALDPFLENENFRRAIKDFGREEFK TYDKRIRDDVTFLINNLGTKYRYTRNGAKEVCIYVIDNDLAKTYGRA >Mature_766_residues TKSMDTISRALQHMDRSVNAWDHRGSVPFEEFLRILVANPALVLRNVFQVFHDMVMSHIGVGIDETPDDPESIHYVSYDC RKLFVEGSDTPFFADRLFANRLVSLVETWKRGAQQNKIYVFEGPPGSGKSTFLNNLLMKFETYANTAEGARHEAVWRLDR QTLGGFTRHETAVFLDKLSKLLEEYEFNQEELFEAEGAMPAGDDFVEIPCPSHDNPVLVIPKQLRRQFFDDLFKNDEMKW RLFTEKEFDWVFRGTCCTVCSSIYQALLARLKSPAAVLRMLHARPYHINRRMGEGISVFNPGDKPVRQNVFTNEMLQSRI NAVLRDSNQVKYLFSQYAKTNNGIYALMDIKGHNTDRLIELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIESYQS FLDRIQYIKIPYVLDLNTEVEIYRNIFGKQIDHSFLPRVLHNFARIIISSRMNERSYAMNDWIPEPHRYSMYCDFNLQLL RMEIYTGHFPAWLTEEDRKKLTAKRRRMIIAESEQEGDRGFSGRDAIKIFGDFYSTYARKDKLITMTTLTSYFTKVRPEL GKQLPAGFLESLMRLYNFTILQEVKESLYYFNEEQISRDVQNYLFAINFEPVVDETCTWTGDKLHITETYLESIENRLLG AGAEREKRLVFRVATQKEYASRTLAQEILFEGKKITDTALYHDLFDRYVFNLKEKALDPFLENENFRRAIKDFGREEFKT YDKRIRDDVTFLINNLGTKYRYTRNGAKEVCIYVIDNDLAKTYGRA
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89731; Mature: 89600
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSMDTISRALQHMDRSVNAWDHRGSVPFEEFLRILVANPALVLRNVFQVFHDMVMSHI CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GVGIDETPDDPESIHYVSYDCRKLFVEGSDTPFFADRLFANRLVSLVETWKRGAQQNKIY CCCCCCCCCCCCCEEEEEEEHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE VFEGPPGSGKSTFLNNLLMKFETYANTAEGARHEAVWRLDRQTLGGFTRHETAVFLDKLS EEECCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KLLEEYEFNQEELFEAEGAMPAGDDFVEIPCPSHDNPVLVIPKQLRRQFFDDLFKNDEMK HHHHHHCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHCCCCCE WRLFTEKEFDWVFRGTCCTVCSSIYQALLARLKSPAAVLRMLHARPYHINRRMGEGISVF EEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCCEEE NPGDKPVRQNVFTNEMLQSRINAVLRDSNQVKYLFSQYAKTNNGIYALMDIKGHNTDRLI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH ELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIESYQSFLDRIQYIKIPYVLDLNTE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCEEEECCCH VEIYRNIFGKQIDHSFLPRVLHNFARIIISSRMNERSYAMNDWIPEPHRYSMYCDFNLQL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCEEE LRMEIYTGHFPAWLTEEDRKKLTAKRRRMIIAESEQEGDRGFSGRDAIKIFGDFYSTYAR EEEEECCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH KDKLITMTTLTSYFTKVRPELGKQLPAGFLESLMRLYNFTILQEVKESLYYFNEEQISRD CCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VQNYLFAINFEPVVDETCTWTGDKLHITETYLESIENRLLGAGAEREKRLVFRVATQKEY HHHHEEEECCCHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHEEHEEEHHHHHH ASRTLAQEILFEGKKITDTALYHDLFDRYVFNLKEKALDPFLENENFRRAIKDFGREEFK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHCHHHHH TYDKRIRDDVTFLINNLGTKYRYTRNGAKEVCIYVIDNDLAKTYGRA HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECHHHHHCCCC >Mature Secondary Structure TKSMDTISRALQHMDRSVNAWDHRGSVPFEEFLRILVANPALVLRNVFQVFHDMVMSHI CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH GVGIDETPDDPESIHYVSYDCRKLFVEGSDTPFFADRLFANRLVSLVETWKRGAQQNKIY CCCCCCCCCCCCCEEEEEEEHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE VFEGPPGSGKSTFLNNLLMKFETYANTAEGARHEAVWRLDRQTLGGFTRHETAVFLDKLS EEECCCCCCHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH KLLEEYEFNQEELFEAEGAMPAGDDFVEIPCPSHDNPVLVIPKQLRRQFFDDLFKNDEMK HHHHHHCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCEEEECHHHHHHHHHHHHCCCCCE WRLFTEKEFDWVFRGTCCTVCSSIYQALLARLKSPAAVLRMLHARPYHINRRMGEGISVF EEEECCCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHCCCCCEEE NPGDKPVRQNVFTNEMLQSRINAVLRDSNQVKYLFSQYAKTNNGIYALMDIKGHNTDRLI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH ELHNIVSEGVHKVDDLEENVDSLFLALMNPEDKSNIESYQSFLDRIQYIKIPYVLDLNTE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCEEEECCCH VEIYRNIFGKQIDHSFLPRVLHNFARIIISSRMNERSYAMNDWIPEPHRYSMYCDFNLQL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCEEEEECCCEEE LRMEIYTGHFPAWLTEEDRKKLTAKRRRMIIAESEQEGDRGFSGRDAIKIFGDFYSTYAR EEEEECCCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH KDKLITMTTLTSYFTKVRPELGKQLPAGFLESLMRLYNFTILQEVKESLYYFNEEQISRD CCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VQNYLFAINFEPVVDETCTWTGDKLHITETYLESIENRLLGAGAEREKRLVFRVATQKEY HHHHEEEECCCHHCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHEEHEEEHHHHHH ASRTLAQEILFEGKKITDTALYHDLFDRYVFNLKEKALDPFLENENFRRAIKDFGREEFK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHCHHHHH TYDKRIRDDVTFLINNLGTKYRYTRNGAKEVCIYVIDNDLAKTYGRA HHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEECHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA