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The map label for this gene is spoVR [H]

Identifier: 39998432

GI number: 39998432

Start: 3670697

End: 3672319

Strand: Direct

Name: spoVR [H]

Synonym: GSU3343

Alternate gene names: 39998432

Gene position: 3670697-3672319 (Clockwise)

Preceding gene: 39998431

Following gene: 39998433

Centisome position: 96.24

GC content: 60.38

Gene sequence:

>1623_bases
ATGCAACTCATCGATCAGCACACGAAAAAGATCATGGAGGGGTGCAAGGAGCGGGCACGCGAGGCGGGGCTGCGCTTTTC
CGACGAAACCCTCGAATACATCGTCACCAACCGGGACATGCTGGAACTCCACCCCAAAGTGATGATCCCCACCCTGTACG
ATTACTGGGTCCATGACGTGGAGGTGCTGAAGGAGAAGGGGAAGTACGAACTCTACCCCCACAACCCCTACGAGACGGTC
ATCAACACCCGGCCGCCCATCTCGTTCTACAACGACAACAACCCGGACTGGCTCAACGTGATGATCTTCTACCACGTGCT
GGCCCATATCGACTTCTTCCAGAACAACCTCTACTACCGCCATACCTGGGACTATGACCTGACCGGCAAGGCCCTGGCCG
ACAAGCGTCTCATCGCCCGGCTACGGTCCGAGCACGGCCGCCGACTCGACTATGTGATAGAGTTCGCCCGCTCCATCGAC
AACCTTGTGGGCTACTACGGCGAACTTTCCGCCCTGTTCCGGGGAGAGACCCCGCCGCTGCCGCGACGGCTCGACTACTA
CTTCGATGTGTTCCTCCAAAGGGTGAAAAAGGTCAAAACCGCCGGGTACGTACAGGAAATCGAACGGTATAACCGCTGCA
TGCGCGACTTCGGCGACCTGGGCGAGGAAACCTTTTTCGCCGAGGTCATGGCCAGGTACCCCGAGTTCGAGGCTCTCTAC
CTGAAAAGCCGGTCGGAAGAAAGACGCGGGCGGCCCGACCTGATGCAGTTCATCATGGAGCACTCCCCCGTCCTCAACCG
GGAGGAACACCGCTGGATGAAGAGCGTGCTGGAGGTAATCCGCTCCACATCGGTCTACTTCCAGCCCCAGATGCGGACCA
AGATCATGAACGAGGGGTGGGCCAGCTACTGGCATGAAAAGCTCTTCCTCACCGATGACCGGATCAGGGGGCACGAGGTG
GACTTCGCCCGGGTTCACTCGGGGGTCACCTGCCTGCACCGGGTGGGACTCAACCCCTACGCCATCGGCATGCGGCTCTT
CCAGCACATCGAGGAGCAGGCCGACAAGGGCCGCATCTCCCTGGAGTTCCAGCAACTGGCCGACATTCATGCCCGGCAGG
AGTTCGACCGCGGCACCGGAGGAGGCACGGCCTTCATCTTCGCCATCCGCGAGAACCTGTGCGACTTCTCGTTCATCAAC
ACCTTCGTGGACCAGGATTTCGTAAACCGGCACAAGCTCTTCGTAGCGGGAAGACGCCTCAACAAGGAGCGGATGACCTG
GCAGTATTACGTCAAGAGCCGCACGGCCGAGGCCTACCGGGCCATGCTCGCGGAGTCCCTTTACCACCCCCCCGTCATTG
CAGTGGACGAAGCGAAGGGCGAGGGGAAGTATCTCTACCTGGACCACCGGTTCGAGGGAAAGCCGCTGGTGAAGGACTTC
ATCGAGAACACCCTGATGGGGATCGAATACCTCTGGGGTGGTCCGGTGAAGCTCGAAACGAGCGAAGTGGGGCTCCCCCC
GCCCGACGAGGCCGTGAAGCCCCCCGAGCGGCAGCAAAAAATCCACTGGCGACGCTACGTCTACACCATGGAGGACCGGA
AGCTTTCGCGGACCCTCCTGTAA

Upstream 100 bases:

>100_bases
AAGACTGATTTCGTGACGGAAGGAACTTCTCGGGGGGCGTGATAGCCGGGCACGGTCAAGGCTCCGGGAGTAACCGACAA
GGCGTGTTTCGGACAGGGTT

Downstream 100 bases:

>100_bases
GGACCAGCCCCCATGACGAAATCCATGGACACCATATCCCGCGCGCTCCAGCATATGGACCGGAGCGTCAACGCCTGGGA
CCACCGGGGTTCCGTTCCCT

Product: SpoVR-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MQLIDQHTKKIMEGCKERAREAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDVEVLKEKGKYELYPHNPYETV
INTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYYRHTWDYDLTGKALADKRLIARLRSEHGRRLDYVIEFARSID
NLVGYYGELSALFRGETPPLPRRLDYYFDVFLQRVKKVKTAGYVQEIERYNRCMRDFGDLGEETFFAEVMARYPEFEALY
LKSRSEERRGRPDLMQFIMEHSPVLNREEHRWMKSVLEVIRSTSVYFQPQMRTKIMNEGWASYWHEKLFLTDDRIRGHEV
DFARVHSGVTCLHRVGLNPYAIGMRLFQHIEEQADKGRISLEFQQLADIHARQEFDRGTGGGTAFIFAIRENLCDFSFIN
TFVDQDFVNRHKLFVAGRRLNKERMTWQYYVKSRTAEAYRAMLAESLYHPPVIAVDEAKGEGKYLYLDHRFEGKPLVKDF
IENTLMGIEYLWGGPVKLETSEVGLPPPDEAVKPPERQQKIHWRRYVYTMEDRKLSRTLL

Sequences:

>Translated_540_residues
MQLIDQHTKKIMEGCKERAREAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDVEVLKEKGKYELYPHNPYETV
INTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYYRHTWDYDLTGKALADKRLIARLRSEHGRRLDYVIEFARSID
NLVGYYGELSALFRGETPPLPRRLDYYFDVFLQRVKKVKTAGYVQEIERYNRCMRDFGDLGEETFFAEVMARYPEFEALY
LKSRSEERRGRPDLMQFIMEHSPVLNREEHRWMKSVLEVIRSTSVYFQPQMRTKIMNEGWASYWHEKLFLTDDRIRGHEV
DFARVHSGVTCLHRVGLNPYAIGMRLFQHIEEQADKGRISLEFQQLADIHARQEFDRGTGGGTAFIFAIRENLCDFSFIN
TFVDQDFVNRHKLFVAGRRLNKERMTWQYYVKSRTAEAYRAMLAESLYHPPVIAVDEAKGEGKYLYLDHRFEGKPLVKDF
IENTLMGIEYLWGGPVKLETSEVGLPPPDEAVKPPERQQKIHWRRYVYTMEDRKLSRTLL
>Mature_540_residues
MQLIDQHTKKIMEGCKERAREAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDVEVLKEKGKYELYPHNPYETV
INTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYYRHTWDYDLTGKALADKRLIARLRSEHGRRLDYVIEFARSID
NLVGYYGELSALFRGETPPLPRRLDYYFDVFLQRVKKVKTAGYVQEIERYNRCMRDFGDLGEETFFAEVMARYPEFEALY
LKSRSEERRGRPDLMQFIMEHSPVLNREEHRWMKSVLEVIRSTSVYFQPQMRTKIMNEGWASYWHEKLFLTDDRIRGHEV
DFARVHSGVTCLHRVGLNPYAIGMRLFQHIEEQADKGRISLEFQQLADIHARQEFDRGTGGGTAFIFAIRENLCDFSFIN
TFVDQDFVNRHKLFVAGRRLNKERMTWQYYVKSRTAEAYRAMLAESLYHPPVIAVDEAKGEGKYLYLDHRFEGKPLVKDF
IENTLMGIEYLWGGPVKLETSEVGLPPPDEAVKPPERQQKIHWRRYVYTMEDRKLSRTLL

Specific function: Appears to be involved in spore cortex formation [H]

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycgB [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=431, Percent_Identity=23.8979118329466, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 64236; Mature: 64236

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIDQHTKKIMEGCKERAREAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDV
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCEECCHHHHHHHHHH
EVLKEKGKYELYPHNPYETVINTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYYR
HHHHHCCCEEECCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
HTWDYDLTGKALADKRLIARLRSEHGRRLDYVIEFARSIDNLVGYYGELSALFRGETPPL
EECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PRRLDYYFDVFLQRVKKVKTAGYVQEIERYNRCMRDFGDLGEETFFAEVMARYPEFEALY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEH
LKSRSEERRGRPDLMQFIMEHSPVLNREEHRWMKSVLEVIRSTSVYFQPQMRTKIMNEGW
HHCCCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHH
ASYWHEKLFLTDDRIRGHEVDFARVHSGVTCLHRVGLNPYAIGMRLFQHIEEQADKGRIS
HHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE
LEFQQLADIHARQEFDRGTGGGTAFIFAIRENLCDFSFINTFVDQDFVNRHKLFVAGRRL
EEHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHEEECCCC
NKERMTWQYYVKSRTAEAYRAMLAESLYHPPVIAVDEAKGEGKYLYLDHRFEGKPLVKDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHH
IENTLMGIEYLWGGPVKLETSEVGLPPPDEAVKPPERQQKIHWRRYVYTMEDRKLSRTLL
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCHHHHHCC
>Mature Secondary Structure
MQLIDQHTKKIMEGCKERAREAGLRFSDETLEYIVTNRDMLELHPKVMIPTLYDYWVHDV
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCEECCHHHHHHHHHH
EVLKEKGKYELYPHNPYETVINTRPPISFYNDNNPDWLNVMIFYHVLAHIDFFQNNLYYR
HHHHHCCCEEECCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
HTWDYDLTGKALADKRLIARLRSEHGRRLDYVIEFARSIDNLVGYYGELSALFRGETPPL
EECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PRRLDYYFDVFLQRVKKVKTAGYVQEIERYNRCMRDFGDLGEETFFAEVMARYPEFEALY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEH
LKSRSEERRGRPDLMQFIMEHSPVLNREEHRWMKSVLEVIRSTSVYFQPQMRTKIMNEGW
HHCCCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHH
ASYWHEKLFLTDDRIRGHEVDFARVHSGVTCLHRVGLNPYAIGMRLFQHIEEQADKGRIS
HHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEE
LEFQQLADIHARQEFDRGTGGGTAFIFAIRENLCDFSFINTFVDQDFVNRHKLFVAGRRL
EEHHHHHHHHHHHHHCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHEEECCCC
NKERMTWQYYVKSRTAEAYRAMLAESLYHPPVIAVDEAKGEGKYLYLDHRFEGKPLVKDF
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCHHHHHH
IENTLMGIEYLWGGPVKLETSEVGLPPPDEAVKPPERQQKIHWRRYVYTMEDRKLSRTLL
HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8144469; 9579061; 9384377 [H]