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The map label for this gene is 39998423

Identifier: 39998423

GI number: 39998423

Start: 3663224

End: 3663538

Strand: Direct

Name: 39998423

Synonym: GSU3334

Alternate gene names: NA

Gene position: 3663224-3663538 (Clockwise)

Preceding gene: 39998414

Following gene: 39998424

Centisome position: 96.04

GC content: 60.95

Gene sequence:

>315_bases
ATGCCCGTGACCAAGGCCGTTGCCGTTATCCTCGCCGCCGGCGCGCTCTGCGCCTCCTCCGTCCCAACCTTCGCCGCCGC
ATCGGGAGAGAAACTCTTCGCAGAGAAGTGCGCCATGTGCCACAAAGTGAAGGGTGCGGGCGGAATCCTCGGCCCGGATC
TGACAAAAGTGGGAGCAACGCGGAATGAATCGTTCCTGCGCGAACAGCTGACAAACCCCAAGAAAATGAATCCTGCCACC
ACCATGCCGTCTTTCAAGGGCCTGCCCAAGCAAGAGCAGGACGCGCTGGTCAACTACCTGAAAGGCCTGCGGTAG

Upstream 100 bases:

>100_bases
CGGCTAAGAGCCGGTCGCGCCGGCGGATATCACCTAACGGCTGGTTGCTTTTTCGACGCGTTCCGGTACAATGGGCTGAC
TCGATTCCAGACCAAGGAGA

Downstream 100 bases:

>100_bases
ACGCCCGTGCGACTGAAGGACGAACAGATAGCCCGGCTGGCCGAGCGCCTCCTGGAGGGGCTCACGGCCGCCGGCCTCAT
CACCCTCAAAGCCGAGCGGG

Product: cytochrome C

Products: NA

Alternate protein names: Lipoprotein Cytochrome C; Cytochrome C Family Protein

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MPVTKAVAVILAAGALCASSVPTFAAASGEKLFAEKCAMCHKVKGAGGILGPDLTKVGATRNESFLREQLTNPKKMNPAT
TMPSFKGLPKQEQDALVNYLKGLR

Sequences:

>Translated_104_residues
MPVTKAVAVILAAGALCASSVPTFAAASGEKLFAEKCAMCHKVKGAGGILGPDLTKVGATRNESFLREQLTNPKKMNPAT
TMPSFKGLPKQEQDALVNYLKGLR
>Mature_103_residues
PVTKAVAVILAAGALCASSVPTFAAASGEKLFAEKCAMCHKVKGAGGILGPDLTKVGATRNESFLREQLTNPKKMNPATT
MPSFKGLPKQEQDALVNYLKGLR

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10904; Mature: 10773

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVTKAVAVILAAGALCASSVPTFAAASGEKLFAEKCAMCHKVKGAGGILGPDLTKVGAT
CCHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
RNESFLREQLTNPKKMNPATTMPSFKGLPKQEQDALVNYLKGLR
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVTKAVAVILAAGALCASSVPTFAAASGEKLFAEKCAMCHKVKGAGGILGPDLTKVGAT
CHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCC
RNESFLREQLTNPKKMNPATTMPSFKGLPKQEQDALVNYLKGLR
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA