Click here to switch to the map view.

The map label for this gene is 39998384

Identifier: 39998384

GI number: 39998384

Start: 3614102

End: 3615421

Strand: Direct

Name: 39998384

Synonym: GSU3295

Alternate gene names: NA

Gene position: 3614102-3615421 (Clockwise)

Preceding gene: 39998383

Following gene: 39998385

Centisome position: 94.76

GC content: 63.41

Gene sequence:

>1320_bases
GTGCCCCGCCCGTTCAGGCTTTCTTGCGCTTTGCTGCACGAACCTGTATCATCGAACCTCATGGACCTGAAGTACGGCGA
CACCTCATTTTCCCTGGCAATCCCCCCCGAACGGCTCATGGGAGTCATCCGCCCGTCGGTGCCCGCACCGGACAGCGATC
CGGCAGCCATCATCTCCGAAGCACTTGACCGTTGCGCCGACGCCATCGCCACCTTCAGGACGGGCGAACGGGTCGTCATC
GTCACCTCGGACATAACCCGTTACACCGGGAGCGAAATCTATCTTCCCCTGCTGGTGGAGCGTCTTGCGGCTGCAGGAGT
CCGGGAGCGCGACATTGAGATCGTCGTGGCCCTCGGCATCCACCGCAAGCAGACAGAACACGAGCACCAGCGGATCACTG
GCCCCCTCTACGGCCGGATTCGCATTACGGACCATGAGTGCGACAACCCCGGCAAACTCGTCCTGATCGGCCGAACATCC
ACCGGTGTCGACGTTGTGGTGAACCGCACGGTGGCGGAAGCCGACCGGGTGATCCTCACCGGGACTATAGGCTTTCACTA
CTTCGCCGGCTTCGGCGGAGGGCGCAAGAGCATCTTGCCCGGCGTGGCCGGCCGCGCCAGCTGCATGGCGAGCCACTACG
CAGTCCTGAACCCCGGTGAAGGCACCGGCAGAAACCCTCTGGCCACCACCGGCAACCTGGAAGGCAACCCGGTCCACCAG
ACCATGGTCGAGGCCTGTGCCATGGTGAATCCTGAATTCATCCTGAACACGGTTCTCTCCCCCGCCAAGCGGATCATCGC
CGCCTTTGCCGGCCACTGGCGCGAGGCCCACGAGGAGGGGTGCCGTTTCTATGCCGACCGGTTCTCCTTTCCCCTGAAGA
AGCCGGCGGACCTGGTGGTCGTATCCTGCGGTGGCTACCCCAAGGACATCAACGTCATCCAGTCCCACAAGTCCATGGAG
TACGGCTGTCAGGCCCTGCGCCGGGGAGGAGTCATGGTCCTGCTCGCCCAATGCCGGGACGGTTACGGCAATGCAACGTT
CTTCGACTGGTTCCGGTTCCGGGAACTGGATGCCTTCGAAGCACGTTTGCGAAGCCACTACGAAATCAACGGCCAGACCG
CCTTCTCCCTGCTGCAGAAGGCCCGAACCTTCAGCATCATCTTGGTCTCGGACCTCCCCCCGGAGGAGGTGCGGACCATG
GGAATGACCCCCGCCAGAACCCTCGACGAGGCCATGACAGCGGCGGCGAGCCTGCTCCCGTCCGACTACACCGCCTACGT
CGTCCCCGAGGGGGGAACGGTGCTGCCGATAATGATGTAG

Upstream 100 bases:

>100_bases
CGAATTCGGCCGCAACTTCGCCCGGCAGGTCATCGAGTACCACAAGGGGTTCTGACGCCCTCTGCCCCGTGAATCCGCAC
CTGAACGGGCGTGGCTCTGC

Downstream 100 bases:

>100_bases
GGGCAAACCTCGTGTTTGCCCGATCTTGGGCGATCACAAGGATCGCCCCTACAAGGACATTGCAACAATGATTGATTCCC
GCATCATTCAAGAAATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MPRPFRLSCALLHEPVSSNLMDLKYGDTSFSLAIPPERLMGVIRPSVPAPDSDPAAIISEALDRCADAIATFRTGERVVI
VTSDITRYTGSEIYLPLLVERLAAAGVRERDIEIVVALGIHRKQTEHEHQRITGPLYGRIRITDHECDNPGKLVLIGRTS
TGVDVVVNRTVAEADRVILTGTIGFHYFAGFGGGRKSILPGVAGRASCMASHYAVLNPGEGTGRNPLATTGNLEGNPVHQ
TMVEACAMVNPEFILNTVLSPAKRIIAAFAGHWREAHEEGCRFYADRFSFPLKKPADLVVVSCGGYPKDINVIQSHKSME
YGCQALRRGGVMVLLAQCRDGYGNATFFDWFRFRELDAFEARLRSHYEINGQTAFSLLQKARTFSIILVSDLPPEEVRTM
GMTPARTLDEAMTAAASLLPSDYTAYVVPEGGTVLPIMM

Sequences:

>Translated_439_residues
MPRPFRLSCALLHEPVSSNLMDLKYGDTSFSLAIPPERLMGVIRPSVPAPDSDPAAIISEALDRCADAIATFRTGERVVI
VTSDITRYTGSEIYLPLLVERLAAAGVRERDIEIVVALGIHRKQTEHEHQRITGPLYGRIRITDHECDNPGKLVLIGRTS
TGVDVVVNRTVAEADRVILTGTIGFHYFAGFGGGRKSILPGVAGRASCMASHYAVLNPGEGTGRNPLATTGNLEGNPVHQ
TMVEACAMVNPEFILNTVLSPAKRIIAAFAGHWREAHEEGCRFYADRFSFPLKKPADLVVVSCGGYPKDINVIQSHKSME
YGCQALRRGGVMVLLAQCRDGYGNATFFDWFRFRELDAFEARLRSHYEINGQTAFSLLQKARTFSIILVSDLPPEEVRTM
GMTPARTLDEAMTAAASLLPSDYTAYVVPEGGTVLPIMM
>Mature_438_residues
PRPFRLSCALLHEPVSSNLMDLKYGDTSFSLAIPPERLMGVIRPSVPAPDSDPAAIISEALDRCADAIATFRTGERVVIV
TSDITRYTGSEIYLPLLVERLAAAGVRERDIEIVVALGIHRKQTEHEHQRITGPLYGRIRITDHECDNPGKLVLIGRTST
GVDVVVNRTVAEADRVILTGTIGFHYFAGFGGGRKSILPGVAGRASCMASHYAVLNPGEGTGRNPLATTGNLEGNPVHQT
MVEACAMVNPEFILNTVLSPAKRIIAAFAGHWREAHEEGCRFYADRFSFPLKKPADLVVVSCGGYPKDINVIQSHKSMEY
GCQALRRGGVMVLLAQCRDGYGNATFFDWFRFRELDAFEARLRSHYEINGQTAFSLLQKARTFSIILVSDLPPEEVRTMG
MTPARTLDEAMTAAASLLPSDYTAYVVPEGGTVLPIMM

Specific function: Unknown

COG id: COG3875

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48010; Mature: 47879

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPFRLSCALLHEPVSSNLMDLKYGDTSFSLAIPPERLMGVIRPSVPAPDSDPAAIISE
CCCCEEEEHHHHHCCCCCCCEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHH
ALDRCADAIATFRTGERVVIVTSDITRYTGSEIYLPLLVERLAAAGVRERDIEIVVALGI
HHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
HRKQTEHEHQRITGPLYGRIRITDHECDNPGKLVLIGRTSTGVDVVVNRTVAEADRVILT
CCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEECHHHCCCCEEEE
GTIGFHYFAGFGGGRKSILPGVAGRASCMASHYAVLNPGEGTGRNPLATTGNLEGNPVHQ
EEHHHHHHHCCCCCCHHCCCCCCCHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHH
TMVEACAMVNPEFILNTVLSPAKRIIAAFAGHWREAHEEGCRFYADRFSFPLKKPADLVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VSCGGYPKDINVIQSHKSMEYGCQALRRGGVMVLLAQCRDGYGNATFFDWFRFRELDAFE
EECCCCCCCCHHHHHHCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
ARLRSHYEINGQTAFSLLQKARTFSIILVSDLPPEEVRTMGMTPARTLDEAMTAAASLLP
HHHHCCEEECCHHHHHHHHHCCEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCC
SDYTAYVVPEGGTVLPIMM
CCCEEEEECCCCEEEEEEC
>Mature Secondary Structure 
PRPFRLSCALLHEPVSSNLMDLKYGDTSFSLAIPPERLMGVIRPSVPAPDSDPAAIISE
CCCEEEEHHHHHCCCCCCCEEEEECCCEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHH
ALDRCADAIATFRTGERVVIVTSDITRYTGSEIYLPLLVERLAAAGVRERDIEIVVALGI
HHHHHHHHHHHHCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECC
HRKQTEHEHQRITGPLYGRIRITDHECDNPGKLVLIGRTSTGVDVVVNRTVAEADRVILT
CCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCEEEEECHHHCCCCEEEE
GTIGFHYFAGFGGGRKSILPGVAGRASCMASHYAVLNPGEGTGRNPLATTGNLEGNPVHQ
EEHHHHHHHCCCCCCHHCCCCCCCHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHH
TMVEACAMVNPEFILNTVLSPAKRIIAAFAGHWREAHEEGCRFYADRFSFPLKKPADLVV
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE
VSCGGYPKDINVIQSHKSMEYGCQALRRGGVMVLLAQCRDGYGNATFFDWFRFRELDAFE
EECCCCCCCCHHHHHHCHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
ARLRSHYEINGQTAFSLLQKARTFSIILVSDLPPEEVRTMGMTPARTLDEAMTAAASLLP
HHHHCCEEECCHHHHHHHHHCCEEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHCC
SDYTAYVVPEGGTVLPIMM
CCCEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA