Click here to switch to the map view.

The map label for this gene is 39998382

Identifier: 39998382

GI number: 39998382

Start: 3612260

End: 3612712

Strand: Direct

Name: 39998382

Synonym: GSU3293

Alternate gene names: NA

Gene position: 3612260-3612712 (Clockwise)

Preceding gene: 39998381

Following gene: 39998383

Centisome position: 94.71

GC content: 55.19

Gene sequence:

>453_bases
ATGGAGTTCGCAACACTGGAAGACATTATCCGTTTCGCTGTTCAGCGGGAAGAAACCGCCTACCGCCTGTACAAGACGGC
GGCAGAGAAGGCCACAAGCATAGCGGCACGCAAGATGTTCGAAGAGATGGCCAATGAGGAGGCGGGTCACAAGCACGCCT
TTGAAAACCTGAACATCGAAGGGGCCGAGCACTACACCTTTGCAGAACGGCCCGACATGAAGCTGGCCGAGTACATGGTC
GACCTCCCGTTCAGGGAGGACATGGACTACCCGGAGATTCTCCGCTATGCCATGAAAACCGAGGAATCGGCCTACAAACT
CTACATGGCCGCGTCCGAGATGACCGACGACCCGAAACTCAAGCGGATGCTCATGGTGCTCGCCGACGTTGAAAAGGGTC
ACAAGTTGAAGGTAGAAGCCCTGTACGACGAAAAAGTCCTCACCGAAATGTAG

Upstream 100 bases:

>100_bases
GTCTGCGGCGTTGGCCCTGATCAATTCGAAGAAATAACCTGAGATGACCCGGCTTCACTGCATGATGTATGCGTCAGCTG
CGCCAGGGAGGGGTAGGTAG

Downstream 100 bases:

>100_bases
CAGGAACCGGCGGCCTGGATGCAGAGACGCCTCCACGCCCCTCCGGCCCTCCCCTTTGGTGAGGGCCGTTCATGTTTCAA
GAGCACGTGAATAATCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Rubrerythrin Rbr

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MEFATLEDIIRFAVQREETAYRLYKTAAEKATSIAARKMFEEMANEEAGHKHAFENLNIEGAEHYTFAERPDMKLAEYMV
DLPFREDMDYPEILRYAMKTEESAYKLYMAASEMTDDPKLKRMLMVLADVEKGHKLKVEALYDEKVLTEM

Sequences:

>Translated_150_residues
MEFATLEDIIRFAVQREETAYRLYKTAAEKATSIAARKMFEEMANEEAGHKHAFENLNIEGAEHYTFAERPDMKLAEYMV
DLPFREDMDYPEILRYAMKTEESAYKLYMAASEMTDDPKLKRMLMVLADVEKGHKLKVEALYDEKVLTEM
>Mature_150_residues
MEFATLEDIIRFAVQREETAYRLYKTAAEKATSIAARKMFEEMANEEAGHKHAFENLNIEGAEHYTFAERPDMKLAEYMV
DLPFREDMDYPEILRYAMKTEESAYKLYMAASEMTDDPKLKRMLMVLADVEKGHKLKVEALYDEKVLTEM

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17567; Mature: 17567

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFATLEDIIRFAVQREETAYRLYKTAAEKATSIAARKMFEEMANEEAGHKHAFENLNIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
GAEHYTFAERPDMKLAEYMVDLPFREDMDYPEILRYAMKTEESAYKLYMAASEMTDDPKL
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH
KRMLMVLADVEKGHKLKVEALYDEKVLTEM
HHHHHHHHHHCCCCEEEEEEHHHHHHHHCC
>Mature Secondary Structure
MEFATLEDIIRFAVQREETAYRLYKTAAEKATSIAARKMFEEMANEEAGHKHAFENLNIE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
GAEHYTFAERPDMKLAEYMVDLPFREDMDYPEILRYAMKTEESAYKLYMAASEMTDDPKL
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH
KRMLMVLADVEKGHKLKVEALYDEKVLTEM
HHHHHHHHHHCCCCEEEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA