| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is hppA [H]
Identifier: 39998380
GI number: 39998380
Start: 3609341
End: 3611383
Strand: Reverse
Name: hppA [H]
Synonym: GSU3291
Alternate gene names: 39998380
Gene position: 3611383-3609341 (Counterclockwise)
Preceding gene: 39998398
Following gene: 39998379
Centisome position: 94.68
GC content: 63.53
Gene sequence:
>2043_bases ATGGAACAGTATGCAGTCTATTTCGCCCTGGTCTGTGCCGCGGCGGCCGTTGTCTACGGCCTCGCCTCGGCCCAGTGGAT CCTGGGGCTCCCCCAGGGGAACGAGCGGATGCGCCAGATCGCCGCAGCGGTCCAAGAGGGTGCCGGCGCCTACATGAAGC GCCAGTACACCATCATCGCCGTGGTCGGCGTGGTCATGTTTATTGCCCTGTTCGCCACGCTGGGGATGAAAACCGCCGTT GGTTTCGCCATCGGTGCCATTTTCTCGGGCCTGACCGGCTTCATCGGCATGTTCGTTTCGGTTCGCGCCAATATCCGGAC CACTGAAGCCGCCAAGTCCGGCATCCACAAGGCTCTCAACGTGGCCTTCAAGGGCGGGGCAATCACCGGCATGCTGGTGG TCGGTCTCGGGCTCCTGGGTGTGGCCGGTTACTATCTGGTCCTGCAGCAGCTGATGCCCGGCGCTCCGGTCAAGGACATC GTGAGCCAGCTGGTAGGCCTCGGCTTCGGCGGCTCCCTGATCTCGATCTTCGCCCGTCTCGGCGGCGGTATTTTCACTAA AGGTGCCGACGTGGGTGCCGACCTGGTGGGCAAGGTTGAAGCCGGTATTCCCGAGGACGACCCGCGCAACCCGGCGGTCA TCGCCGACAACGTGGGCGACAACGTGGGCGACTGCGCCGGCATGGCCGCCGACCTGTTCGAAACCTATGCCGTGACCCTG ATCGCCGCCATGCTGCTGGGCGCCATCGCCTTCAACAACTTCTCAGGCGCGGTGACCTATCCGCTGATCCTCGGCGGCAT CTCCATCATCGCCTCCATCATCGGCACCTTCTTCGTCAAACTTGGCGCCAGCCAGAAGATCATGCCTGCCCTCTACAAGG GGCTGATCGCCTCAGGCGTCATCGCCTGTATCGCCTTCTACTTCGTCACGGTTCAGATGTTCCCCGAAGGGAACCCCACC GGGTACTCCGCCACTAACATCTTTATCTCCGCCATTGTCGGCCTGGTGGTCACCGGTGCCATCTTCTGGATCACCGAATA CTACACCGCCACCGAGTACGCCCCGGTGAAGCACATCGCCCAGGCCTCCACCACCGGCCACGCCACCAACATCATCGCCG GCCTCGGCGTCTCAATGAAGTCCACGGCCATGCCGATCATCGTCATCGCCGCCGGCATCATCGTGGCGTTCCAGTGCGCC GGCGTGTACGGCATCGCCATTGCCGCCGTGTCCATGCTGTCGCTGACGGGCATCGTCGTTGCCATGGACGCCTACGGCCC CATTACCGACAACGCGGGCGGCATCGCCGAGATGGCCGAACTGGACGATTCGGTTCGCGCCGTCACCGACCCCCTGGACG CCGTGGGCAACACCACCAAGGCCGTCACCAAGGGCTACGCCATCGGTTCCGCCGGTCTGGCCGCGGTCATTCTCTTCACC TCCTACGTGGACGAACTGAAGCTGGCGGGGCAGAACATCGAGTTCAGCCTGGCCGATCCCTACATCATCGTCGGTCTCTT CCTGGGCGGCATGCTGCCCTACTACTTTGCCGCCCTCTGCATGGAGGCGGTCGGCAAGGCCGGCGGCTCGGTCGTTGAAG AGGTTCGCCGCCAGTTCCGCGAGATCAAGGGGATCATGGAAGGCACCGGCAAGCCCGACTATGCCGCCTGCGTCGACATC GTCACCAAGAGCGCCCTCAAGGAAATGGTGATCCCGGGCATCATTCCCATCGCCGCACCGGTCATCATCGGCTTTACCCT CGGCCCCAAGGCCCTGGGGGGCGTGATCGTCGGCACCATCGTTACGGGCATTTTCGTCGCCATCTCCATGACCACCGGCG GCGGCGCCTGGGACAACGCCAAAAAGTACATCGAGGACGGCTATCACGGCGGCAAGGGTGGTGAAGCCCACAAGGCGGCC GTCACGGGTGACACCGTGGGCGACCCCTACAAGGACACCGCCGGCCCGGCCGTCAACCCGATGATCAAAATCATCAACAT CGTGTCGCTTCTCATCGTGCCGCTTCTGGCCAAGATGGGCTAA
Upstream 100 bases:
>100_bases ATGGTTTCCTATAACAATTTTTCGTTTTTCGCTCTGCGGATGCGGGGCTTTTTTTGCGGAAACACGGCCTGTTCGGCTAT CTATCATAGGAGGTTGGTTC
Downstream 100 bases:
>100_bases CGAGCGGCACTATCTAATCTGCAGAAAAAAGGGCGGTCCCTGAAGGGACCTCCCTTTTTTCGTTCAACGCACCGGTTATT CGTCCCGTGGGCAGGCCCAG
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound proton-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; H(+)-PPase [H]
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MEQYAVYFALVCAAAAVVYGLASAQWILGLPQGNERMRQIAAAVQEGAGAYMKRQYTIIAVVGVVMFIALFATLGMKTAV GFAIGAIFSGLTGFIGMFVSVRANIRTTEAAKSGIHKALNVAFKGGAITGMLVVGLGLLGVAGYYLVLQQLMPGAPVKDI VSQLVGLGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL IAAMLLGAIAFNNFSGAVTYPLILGGISIIASIIGTFFVKLGASQKIMPALYKGLIASGVIACIAFYFVTVQMFPEGNPT GYSATNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIAQASTTGHATNIIAGLGVSMKSTAMPIIVIAAGIIVAFQCA GVYGIAIAAVSMLSLTGIVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAVILFT SYVDELKLAGQNIEFSLADPYIIVGLFLGGMLPYYFAALCMEAVGKAGGSVVEEVRRQFREIKGIMEGTGKPDYAACVDI VTKSALKEMVIPGIIPIAAPVIIGFTLGPKALGGVIVGTIVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGGEAHKAA VTGDTVGDPYKDTAGPAVNPMIKIINIVSLLIVPLLAKMG
Sequences:
>Translated_680_residues MEQYAVYFALVCAAAAVVYGLASAQWILGLPQGNERMRQIAAAVQEGAGAYMKRQYTIIAVVGVVMFIALFATLGMKTAV GFAIGAIFSGLTGFIGMFVSVRANIRTTEAAKSGIHKALNVAFKGGAITGMLVVGLGLLGVAGYYLVLQQLMPGAPVKDI VSQLVGLGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL IAAMLLGAIAFNNFSGAVTYPLILGGISIIASIIGTFFVKLGASQKIMPALYKGLIASGVIACIAFYFVTVQMFPEGNPT GYSATNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIAQASTTGHATNIIAGLGVSMKSTAMPIIVIAAGIIVAFQCA GVYGIAIAAVSMLSLTGIVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAVILFT SYVDELKLAGQNIEFSLADPYIIVGLFLGGMLPYYFAALCMEAVGKAGGSVVEEVRRQFREIKGIMEGTGKPDYAACVDI VTKSALKEMVIPGIIPIAAPVIIGFTLGPKALGGVIVGTIVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGGEAHKAA VTGDTVGDPYKDTAGPAVNPMIKIINIVSLLIVPLLAKMG >Mature_680_residues MEQYAVYFALVCAAAAVVYGLASAQWILGLPQGNERMRQIAAAVQEGAGAYMKRQYTIIAVVGVVMFIALFATLGMKTAV GFAIGAIFSGLTGFIGMFVSVRANIRTTEAAKSGIHKALNVAFKGGAITGMLVVGLGLLGVAGYYLVLQQLMPGAPVKDI VSQLVGLGFGGSLISIFARLGGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL IAAMLLGAIAFNNFSGAVTYPLILGGISIIASIIGTFFVKLGASQKIMPALYKGLIASGVIACIAFYFVTVQMFPEGNPT GYSATNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIAQASTTGHATNIIAGLGVSMKSTAMPIIVIAAGIIVAFQCA GVYGIAIAAVSMLSLTGIVVAMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAVILFT SYVDELKLAGQNIEFSLADPYIIVGLFLGGMLPYYFAALCMEAVGKAGGSVVEEVRRQFREIKGIMEGTGKPDYAACVDI VTKSALKEMVIPGIIPIAAPVIIGFTLGPKALGGVIVGTIVTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGGEAHKAA VTGDTVGDPYKDTAGPAVNPMIKIINIVSLLIVPLLAKMG
Specific function: Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-insensitive subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 69812; Mature: 69812
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQYAVYFALVCAAAAVVYGLASAQWILGLPQGNERMRQIAAAVQEGAGAYMKRQYTIIA CCHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH VVGVVMFIALFATLGMKTAVGFAIGAIFSGLTGFIGMFVSVRANIRTTEAAKSGIHKALN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VAFKGGAITGMLVVGLGLLGVAGYYLVLQQLMPGAPVKDIVSQLVGLGFGGSLISIFARL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH GGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL CCCEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH IAAMLLGAIAFNNFSGAVTYPLILGGISIIASIIGTFFVKLGASQKIMPALYKGLIASGV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IACIAFYFVTVQMFPEGNPTGYSATNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QASTTGHATNIIAGLGVSMKSTAMPIIVIAAGIIVAFQCAGVYGIAIAAVSMLSLTGIVV HHCCCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE AMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAVILFT EEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHH SYVDELKLAGQNIEFSLADPYIIVGLFLGGMLPYYFAALCMEAVGKAGGSVVEEVRRQFR HHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EIKGIMEGTGKPDYAACVDIVTKSALKEMVIPGIIPIAAPVIIGFTLGPKALGGVIVGTI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH VTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGGEAHKAAVTGDTVGDPYKDTAGPAVNP HHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHH MIKIINIVSLLIVPLLAKMG HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEQYAVYFALVCAAAAVVYGLASAQWILGLPQGNERMRQIAAAVQEGAGAYMKRQYTIIA CCHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH VVGVVMFIALFATLGMKTAVGFAIGAIFSGLTGFIGMFVSVRANIRTTEAAKSGIHKALN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VAFKGGAITGMLVVGLGLLGVAGYYLVLQQLMPGAPVKDIVSQLVGLGFGGSLISIFARL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH GGGIFTKGADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDCAGMAADLFETYAVTL CCCEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH IAAMLLGAIAFNNFSGAVTYPLILGGISIIASIIGTFFVKLGASQKIMPALYKGLIASGV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IACIAFYFVTVQMFPEGNPTGYSATNIFISAIVGLVVTGAIFWITEYYTATEYAPVKHIA HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QASTTGHATNIIAGLGVSMKSTAMPIIVIAAGIIVAFQCAGVYGIAIAAVSMLSLTGIVV HHCCCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE AMDAYGPITDNAGGIAEMAELDDSVRAVTDPLDAVGNTTKAVTKGYAIGSAGLAAVILFT EEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHH SYVDELKLAGQNIEFSLADPYIIVGLFLGGMLPYYFAALCMEAVGKAGGSVVEEVRRQFR HHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EIKGIMEGTGKPDYAACVDIVTKSALKEMVIPGIIPIAAPVIIGFTLGPKALGGVIVGTI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH VTGIFVAISMTTGGGAWDNAKKYIEDGYHGGKGGEAHKAAVTGDTVGDPYKDTAGPAVNP HHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHH MIKIINIVSLLIVPLLAKMG HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]