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The map label for this gene is 39998367

Identifier: 39998367

GI number: 39998367

Start: 3595125

End: 3598025

Strand: Reverse

Name: 39998367

Synonym: GSU3278

Alternate gene names: NA

Gene position: 3598025-3595125 (Counterclockwise)

Preceding gene: 39998369

Following gene: 39998366

Centisome position: 94.33

GC content: 62.77

Gene sequence:

>2901_bases
TTGCAAGCCACTGGAAAGGTTAAGCCCGTGAATTTTATGAAATCCTTCCGCACTACCTTTGTCAGGTGCCTTGCCGGATA
TCTCATAATCGCGTCGCTTCTTACCTCCCCCGCCTTTGCCGTCACCTCTGAAGACTCACAGATATTCATTGCCGGCTTCA
ACGCCTATCAGAAGAAGGACTACCAAGCAGCCATCGACCGGATGAAGACGGTCCTCGATAAGTATCCCGATACGCCGTTG
CGCGACATGGCCATTTTCTGGCTTGCCCGGGCAAGCTTCAAAGCTGGGTACGAGCGGGATGCCGCCCGCTATATGTCGCA
GTTTTTCAAGGAATACCCCGACAGTCCTCTCAAGGGAACCGTGGAGGACGATCTCCTTGGCCTCGTAACACGTTACGACA
AGGGGGAGCAACTCCCGGCAATGGCTCGGCGTGGAGCCGAGGCGCCGGTATCGGAGACTTCGGTTGCCCGCCAGGTCCTG
GCTGAAAAGACCGCCTCTGCCCGCCAGGCTGCTGAGCAGGCTGCCCAGAAAGCGGCGAGCATTACTGCTGGCGCTGCCAC
CACTACTGCTGAGGCGGTAGGTGCCGCCACTGCTGCCGCTACCGCTGCGAGTCAAGCTGTCGCTCGGAAAGCGGCTGAGG
AGAAAGCGGCTGAGGAGAAAGCGGCCGCCGAGCGCCTTGCCGCGGAGCAGGCTGCCCGGGAACGGGTGGAGGCAGAGAGG
CTTGCCGCCCAGAAAGCCGCTCAGGAAAAGGCGACTGCCGAGCGCCGTGTTGCAGAGCAGACTGCCCGCGAGAAAGCCGA
AGCTGAGCGGGTTGCTGCCCAGAAGGCTGCAGAAGAGAAGGTGGCTGCCGAGCGCCGTGCCGCAGAGCAGGCTGCCCGCG
AGAAAGCCGAAGCTGAGCGGGTTGCTGCCCAGAAGGCTGCAGAAGAGAAGGTGGCTGCCGAGCGCCGTGCCGCAGAGCAG
GCTGCCCGTGAGAAGGCCGAGGCTGAGCGGGTTGCCGCCCAGAAGGCCGCAGAAGAGAAGGCGGCTGCCGGGCGTCTTGC
CGCAGAGCAGGCCGCCCGCGAGAAAGCCGAAGCTGAGCGTCTTGCCGCAGAGAAGACTGCCGCAGAATTGAGAGCAGCGG
AGCAGGCGGCGGCAGCCAAGGTCGAAGCCGAGCGCGTGGCCGCCGACCAGGCCCGGCGCGACAGGGAGGCTGCCGAACGC
CTGGCTGCCGAGAAGGCTGCCCGCCAGAAGGAAGAGACTGAACAGTCCGCCGTTCGCCGCGCCGAGGAACAGAAGCGGGC
CGCTCTGCGCGAGAAGGCCGTTGCCGAGTATAAATCGCTCATCGACCGCTTCCCGGGGACCCGGGCCGCCGCTGCTGCTG
CCGCCAAGCTCGCGGAGATGGGAATCACCCATGTCGCGCCAAGTCCGGCCGTTGCCGCTGCCCCTCCGGCACTCCCCGAA
AAGAATGCCCAGATTCTCACGCTGGAAGTGGGGCAGTTCGCCGATGCCGATCTGATGATTCAAGCCCCGGCCCAGGGCCT
TGAGGCCGGAAAACGCCACGAGATCCCCTTTGAAGTGGTCAACCGGGGCAACGGAACCGACAGCTTCTATCTTGAATCGG
GTTTCCCCTCCGAATTCGGAGCCCAGTTCGCCGATGCCGGCCGGAAGGAGATGCCGATCAATCTGACACCTTCCCTGGCG
CCGGGGGAACGATTCCGGGGGATACTCTCCATTGCGGTGCCGCGCGAAGCTATTGACGGACAGAAGCTCGTCTATCCGAT
CAAGGTCGCTTCGCGGCTCGACCGTGAGGCATCCCAGGCGCGGGACATCTTTCTGACCGCATCGGCTCCGCTCCTGCGGG
CAGTGGTCAAGACGGACAAGAATCAGGTGCTTCCCGGGGAGAAGGTCTCCTATCGGGTTGTGCTCCTCAATATCGGCACT
GCCGCTGCCCAGGGCGTGGCACTTCGCCTGAACTACCCGCCCCAGTATGAGCCGGTGGGCTTTGGCGAGGCTGGGTTCAA
GCAGGAAATGAAGGCGGCTCTCGTTCTGGACGGCATGCGGCTGGTCTCCGGCGAGAGCCGGGAGTTCGAGGTGACGTTCC
AGCTCAAGGATGAGGCCATTGCACGTCAGGAACTCTTCCTGCGCGCCGACTTGGTCAACAGCGAGCTGCAGACTCGCGAT
TCGTTCATCTCTGCGGCGGCTGTGGTCAAACCGGTAAGCGGGGTGGCCGTCAGGACCGCCAGCGAGAAACTTGTGGTGAT
TCCCGGCCAGCAGGTTTCGATTCCTCTGGTGGTTACCAACACCGGCAACCAGCGCGAGGATGTCATCATCAAGCCCAATC
TTCCGCCGAACGTGGCCTATACCGTCTACCAGGACCTGAACCGCGACGGCATCCGGCAGAACAACGAGCCGATCATCAAC
CACGTAGGGCCCCTCGCGCCCAAGGAAGAATCGTACGTGATCCTCGATCTGTCCACTCCCTTCTCGGAGAGCGACGGGAC
TGCCGCCACAGTGTCCCTGGCCTTCGAGCCGGAAACCGACCAGGCCCGGGGTGCTCTTGCCTCGTTGCGCCTCCTCTACT
CACGGCCGGTGGTGGACCTGGTTATGAGCGGCAAGGGAGGACGCCTGAAGCCGGGCGAGGTTTCCTCCTTCGAGCTGAAC
TTCACGAACCGCGGTTCAAACATGGCCAAGAGTGTCGAACTCCAAAGCACCATGCCCAAGGACCTGGAGCTGGTGGCGTC
CGATCCGTCGTTCGTCCGGAATGCCAACGGCGACTATCTCTGGACCTTCGACGAACTGGGCGCCAGCGAGAAACGCACCA
TCAAGGTAACGTTCCGCGTCCGTTCGGGCACAGCCGTGGGAACGAGCATCCAGGTCAAGAATGTCCTGAAGTATCAAGAC
CAGTTGGGGAACAGGTACTGA

Upstream 100 bases:

>100_bases
TTGGGCCGTTTATCGCGTAATTACAGGGGTTCGCGCCGGTATTCCCCGTTGACAAGCCACAGTTATGATGCTATGTAACT
GAACTGATTACTTACACCCC

Downstream 100 bases:

>100_bases
TATGAAGAGCGCACTCAGGGTTGTTTCCGCCTCCCTCGTCCTCTCCATGGCCTCCCTGGCGGCCGGCGGGGAATACCTTC
TCTATACGCCCGGGGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Repeat Domain Protein; Pentapeptide Repeat Protein

Number of amino acids: Translated: 966; Mature: 966

Protein sequence:

>966_residues
MQATGKVKPVNFMKSFRTTFVRCLAGYLIIASLLTSPAFAVTSEDSQIFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPL
RDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSPLKGTVEDDLLGLVTRYDKGEQLPAMARRGAEAPVSETSVARQVL
AEKTASARQAAEQAAQKAASITAGAATTTAEAVGAATAAATAASQAVARKAAEEKAAEEKAAAERLAAEQAARERVEAER
LAAQKAAQEKATAERRVAEQTAREKAEAERVAAQKAAEEKVAAERRAAEQAAREKAEAERVAAQKAAEEKVAAERRAAEQ
AAREKAEAERVAAQKAAEEKAAAGRLAAEQAAREKAEAERLAAEKTAAELRAAEQAAAAKVEAERVAADQARRDREAAER
LAAEKAARQKEETEQSAVRRAEEQKRAALREKAVAEYKSLIDRFPGTRAAAAAAAKLAEMGITHVAPSPAVAAAPPALPE
KNAQILTLEVGQFADADLMIQAPAQGLEAGKRHEIPFEVVNRGNGTDSFYLESGFPSEFGAQFADAGRKEMPINLTPSLA
PGERFRGILSIAVPREAIDGQKLVYPIKVASRLDREASQARDIFLTASAPLLRAVVKTDKNQVLPGEKVSYRVVLLNIGT
AAAQGVALRLNYPPQYEPVGFGEAGFKQEMKAALVLDGMRLVSGESREFEVTFQLKDEAIARQELFLRADLVNSELQTRD
SFISAAAVVKPVSGVAVRTASEKLVVIPGQQVSIPLVVTNTGNQREDVIIKPNLPPNVAYTVYQDLNRDGIRQNNEPIIN
HVGPLAPKEESYVILDLSTPFSESDGTAATVSLAFEPETDQARGALASLRLLYSRPVVDLVMSGKGGRLKPGEVSSFELN
FTNRGSNMAKSVELQSTMPKDLELVASDPSFVRNANGDYLWTFDELGASEKRTIKVTFRVRSGTAVGTSIQVKNVLKYQD
QLGNRY

Sequences:

>Translated_966_residues
MQATGKVKPVNFMKSFRTTFVRCLAGYLIIASLLTSPAFAVTSEDSQIFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPL
RDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSPLKGTVEDDLLGLVTRYDKGEQLPAMARRGAEAPVSETSVARQVL
AEKTASARQAAEQAAQKAASITAGAATTTAEAVGAATAAATAASQAVARKAAEEKAAEEKAAAERLAAEQAARERVEAER
LAAQKAAQEKATAERRVAEQTAREKAEAERVAAQKAAEEKVAAERRAAEQAAREKAEAERVAAQKAAEEKVAAERRAAEQ
AAREKAEAERVAAQKAAEEKAAAGRLAAEQAAREKAEAERLAAEKTAAELRAAEQAAAAKVEAERVAADQARRDREAAER
LAAEKAARQKEETEQSAVRRAEEQKRAALREKAVAEYKSLIDRFPGTRAAAAAAAKLAEMGITHVAPSPAVAAAPPALPE
KNAQILTLEVGQFADADLMIQAPAQGLEAGKRHEIPFEVVNRGNGTDSFYLESGFPSEFGAQFADAGRKEMPINLTPSLA
PGERFRGILSIAVPREAIDGQKLVYPIKVASRLDREASQARDIFLTASAPLLRAVVKTDKNQVLPGEKVSYRVVLLNIGT
AAAQGVALRLNYPPQYEPVGFGEAGFKQEMKAALVLDGMRLVSGESREFEVTFQLKDEAIARQELFLRADLVNSELQTRD
SFISAAAVVKPVSGVAVRTASEKLVVIPGQQVSIPLVVTNTGNQREDVIIKPNLPPNVAYTVYQDLNRDGIRQNNEPIIN
HVGPLAPKEESYVILDLSTPFSESDGTAATVSLAFEPETDQARGALASLRLLYSRPVVDLVMSGKGGRLKPGEVSSFELN
FTNRGSNMAKSVELQSTMPKDLELVASDPSFVRNANGDYLWTFDELGASEKRTIKVTFRVRSGTAVGTSIQVKNVLKYQD
QLGNRY
>Mature_966_residues
MQATGKVKPVNFMKSFRTTFVRCLAGYLIIASLLTSPAFAVTSEDSQIFIAGFNAYQKKDYQAAIDRMKTVLDKYPDTPL
RDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSPLKGTVEDDLLGLVTRYDKGEQLPAMARRGAEAPVSETSVARQVL
AEKTASARQAAEQAAQKAASITAGAATTTAEAVGAATAAATAASQAVARKAAEEKAAEEKAAAERLAAEQAARERVEAER
LAAQKAAQEKATAERRVAEQTAREKAEAERVAAQKAAEEKVAAERRAAEQAAREKAEAERVAAQKAAEEKVAAERRAAEQ
AAREKAEAERVAAQKAAEEKAAAGRLAAEQAAREKAEAERLAAEKTAAELRAAEQAAAAKVEAERVAADQARRDREAAER
LAAEKAARQKEETEQSAVRRAEEQKRAALREKAVAEYKSLIDRFPGTRAAAAAAAKLAEMGITHVAPSPAVAAAPPALPE
KNAQILTLEVGQFADADLMIQAPAQGLEAGKRHEIPFEVVNRGNGTDSFYLESGFPSEFGAQFADAGRKEMPINLTPSLA
PGERFRGILSIAVPREAIDGQKLVYPIKVASRLDREASQARDIFLTASAPLLRAVVKTDKNQVLPGEKVSYRVVLLNIGT
AAAQGVALRLNYPPQYEPVGFGEAGFKQEMKAALVLDGMRLVSGESREFEVTFQLKDEAIARQELFLRADLVNSELQTRD
SFISAAAVVKPVSGVAVRTASEKLVVIPGQQVSIPLVVTNTGNQREDVIIKPNLPPNVAYTVYQDLNRDGIRQNNEPIIN
HVGPLAPKEESYVILDLSTPFSESDGTAATVSLAFEPETDQARGALASLRLLYSRPVVDLVMSGKGGRLKPGEVSSFELN
FTNRGSNMAKSVELQSTMPKDLELVASDPSFVRNANGDYLWTFDELGASEKRTIKVTFRVRSGTAVGTSIQVKNVLKYQD
QLGNRY

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104249; Mature: 104249

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQATGKVKPVNFMKSFRTTFVRCLAGYLIIASLLTSPAFAVTSEDSQIFIAGFNAYQKKD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHH
YQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSPLKGT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
VEDDLLGLVTRYDKGEQLPAMARRGAEAPVSETSVARQVLAEKTASARQAAEQAAQKAAS
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAGAATTTAEAVGAATAAATAASQAVARKAAEEKAAEEKAAAERLAAEQAARERVEAER
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQKAAQEKATAERRVAEQTAREKAEAERVAAQKAAEEKVAAERRAAEQAAREKAEAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAQKAAEEKVAAERRAAEQAAREKAEAERVAAQKAAEEKAAAGRLAAEQAAREKAEAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAEKTAAELRAAEQAAAAKVEAERVAADQARRDREAAERLAAEKAARQKEETEQSAVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEQKRAALREKAVAEYKSLIDRFPGTRAAAAAAAKLAEMGITHVAPSPAVAAAPPALPE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCC
KNAQILTLEVGQFADADLMIQAPAQGLEAGKRHEIPFEVVNRGNGTDSFYLESGFPSEFG
CCCEEEEEECCCCCCCCEEEECCHHHHCCCCCCCCCHHHHCCCCCCCCEEECCCCCHHHH
AQFADAGRKEMPINLTPSLAPGERFRGILSIAVPREAIDGQKLVYPIKVASRLDREASQA
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEECCHHHCCCCEEEEHHHHHHHHHHHHHHH
RDIFLTASAPLLRAVVKTDKNQVLPGEKVSYRVVLLNIGTAAAQGVALRLNYPPQYEPVG
CEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHCCEEEEECCCCCCCCCC
FGEAGFKQEMKAALVLDGMRLVSGESREFEVTFQLKDEAIARQELFLRADLVNSELQTRD
CCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SFISAAAVVKPVSGVAVRTASEKLVVIPGQQVSIPLVVTNTGNQREDVIIKPNLPPNVAY
HHHHHHHHHHCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCHH
TVYQDLNRDGIRQNNEPIINHVGPLAPKEESYVILDLSTPFSESDGTAATVSLAFEPETD
HHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCC
QARGALASLRLLYSRPVVDLVMSGKGGRLKPGEVSSFELNFTNRGSNMAKSVELQSTMPK
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHEEHHHCCCC
DLELVASDPSFVRNANGDYLWTFDELGASEKRTIKVTFRVRSGTAVGTSIQVKNVLKYQD
CCEEEECCCHHHHCCCCCEEEEHHHCCCCCCEEEEEEEEEECCCEECCCHHHHHHHHHHH
QLGNRY
HHCCCC
>Mature Secondary Structure
MQATGKVKPVNFMKSFRTTFVRCLAGYLIIASLLTSPAFAVTSEDSQIFIAGFNAYQKKD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCHHHHHH
YQAAIDRMKTVLDKYPDTPLRDMAIFWLARASFKAGYERDAARYMSQFFKEYPDSPLKGT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCC
VEDDLLGLVTRYDKGEQLPAMARRGAEAPVSETSVARQVLAEKTASARQAAEQAAQKAAS
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITAGAATTTAEAVGAATAAATAASQAVARKAAEEKAAEEKAAAERLAAEQAARERVEAER
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQKAAQEKATAERRVAEQTAREKAEAERVAAQKAAEEKVAAERRAAEQAAREKAEAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAQKAAEEKVAAERRAAEQAAREKAEAERVAAQKAAEEKAAAGRLAAEQAAREKAEAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAEKTAAELRAAEQAAAAKVEAERVAADQARRDREAAERLAAEKAARQKEETEQSAVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEQKRAALREKAVAEYKSLIDRFPGTRAAAAAAAKLAEMGITHVAPSPAVAAAPPALPE
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCC
KNAQILTLEVGQFADADLMIQAPAQGLEAGKRHEIPFEVVNRGNGTDSFYLESGFPSEFG
CCCEEEEEECCCCCCCCEEEECCHHHHCCCCCCCCCHHHHCCCCCCCCEEECCCCCHHHH
AQFADAGRKEMPINLTPSLAPGERFRGILSIAVPREAIDGQKLVYPIKVASRLDREASQA
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHEEECCHHHCCCCEEEEHHHHHHHHHHHHHHH
RDIFLTASAPLLRAVVKTDKNQVLPGEKVSYRVVLLNIGTAAAQGVALRLNYPPQYEPVG
CEEEEECCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCHHHCCEEEEECCCCCCCCCC
FGEAGFKQEMKAALVLDGMRLVSGESREFEVTFQLKDEAIARQELFLRADLVNSELQTRD
CCCCCHHHHHHHHHHHCCHHHHCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
SFISAAAVVKPVSGVAVRTASEKLVVIPGQQVSIPLVVTNTGNQREDVIIKPNLPPNVAY
HHHHHHHHHHCCCCEEEEECCCCEEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCHH
TVYQDLNRDGIRQNNEPIINHVGPLAPKEESYVILDLSTPFSESDGTAATVSLAFEPETD
HHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCC
QARGALASLRLLYSRPVVDLVMSGKGGRLKPGEVSSFELNFTNRGSNMAKSVELQSTMPK
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCHHHHEEHHHCCCC
DLELVASDPSFVRNANGDYLWTFDELGASEKRTIKVTFRVRSGTAVGTSIQVKNVLKYQD
CCEEEECCCHHHHCCCCCEEEEHHHCCCCCCEEEEEEEEEECCCEECCCHHHHHHHHHHH
QLGNRY
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA