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The map label for this gene is 39998360

Identifier: 39998360

GI number: 39998360

Start: 3588092

End: 3589501

Strand: Reverse

Name: 39998360

Synonym: GSU3271

Alternate gene names: NA

Gene position: 3589501-3588092 (Counterclockwise)

Preceding gene: 39998361

Following gene: 39998359

Centisome position: 94.11

GC content: 63.05

Gene sequence:

>1410_bases
ATGCGGAACATGAAGAAGGTGTTGGTGGTGGGTCTCGCGCTGCTCGGGAGTCTGGTCGTCGGCTCCACGGGAGCCCAGGC
GCGCAATCCGGAATTTGCTCTTCCCGAGAAGGTCGAGGTAAAGCACAAGGCCTGCCAGGAGATCTTACGGCTTGCGGCCA
CGTATCAGGTGGAGGGGTTGTTCTCAAAGGAATTCGAGGCGGGCCAGGTGTGCTACACCCGCACGGACCTGGCGGTGGTG
CTGGAGCTGCTGACCGAGAAACTGGCGGAGAAAGTGGTGAAGGAAGGCTCGGCCGCCGTGGCCAAGGAAGACCTGGTGCT
CCTGGCGGAGCTCCAGGACGAACTGCGCGGGGAAATGCTCCTGGCACGCACCCGTACCTTCCAGCAGCGCCGGGAGGGTC
TCGGCACCAGGCTCACCGCCATCACCAAGAACATCTCCCTCAGCGGGGGACTGGTGGGGGTCCTCCAGGGCTCCATCGGC
AATGAGCCCTCCGACCACGTGGACGTGGTCGGCAGGGGAGACCTGGTCTTCAGTTTCAAGGTGGGTGAGAACACCATCGC
GGTGATCGACGTGGAGGCGACCGGCGGCAACGGCATCGACACCAGGGTGCCCAGCTTCTCGCTGCTGAACGCCGTGGCCG
GCAGCACCGGTGATACGGTCCGCTTCCGCGAAGCATGGGTAGAGCATGCGGCGTTCGATGAACGCCTGATCCTAACCGCC
GGCAAGATCGACCTGACCAACTACTTCGACGCCAACGGCGTGGCAAACGACGAGAACAGCCAGTTTCTGGCCGGAGCCTT
CGTGAACTCGGCGGTTCTGGGTGCCCCCGGCAACGGGCCGGGAGCCAGGCTCCAGGCAAAGCTGGGCGAGCCGCTCACCT
TCGGCCTCGGCTACGGCAGCGGCGACACCGACACGGAGGATGTGTTCTCGCACGGCTACGGAATAGCCGAGCTGGACTAC
ACCCTCAAGGTAGGTGAACTGGAAGGGAACTACCGCGTCTATGGCAGCCTGGACGGAGCGCGTGCCGATGGCGAGGTGAA
GCTGCAGGAAAAAAACGCCTTCGGGTTCGGGATCAGCGCTGACCAGCAGGTGACCGACAAGCTGACCCTGTTCGTGCGCT
ATGGCCAGCGTGACGAGGACGTCTATGCCACGAAGATGGCCTGGAGCGCCGGCGGACAGTACGCCGGGCTGCTTCCCGAG
CGCAAGGATGATGTCCTCGGCTTTGCCTACGGACAGGTGAAGGCCGTGGGTGCTGACTCACAGGAAAAACTGGCGGAGCT
CTACTACAAGGTCCAGGTGAACGAGCAGATCAGCATCGCGCCTGTGGTTCAGTACCTGATCAATCCTCTGGGGGACAGCA
GCAGGGATGACGTGGTGGCACTGGGGCTGCGCTCACTGATCAGTTTTTAA

Upstream 100 bases:

>100_bases
CAGTTTACGCTCAGCAATTGAAAATGGAATTCATTTTTATGGTGGTCGACGGAGCCGATGGCGGTATCTGCCGGCTGGAG
CGACACGACAAGGAGGGAAC

Downstream 100 bases:

>100_bases
CGGCATATTCCGACAACCCCGGCAGGGGGAATGAAGCACCCCCTGCCGGAATGTTCACGAAAGGAGTTCCCATGATACCC
CTGGGACTGCTGAACCCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Carbohydrate-Selective Porin

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRNMKKVLVVGLALLGSLVVGSTGAQARNPEFALPEKVEVKHKACQEILRLAATYQVEGLFSKEFEAGQVCYTRTDLAVV
LELLTEKLAEKVVKEGSAAVAKEDLVLLAELQDELRGEMLLARTRTFQQRREGLGTRLTAITKNISLSGGLVGVLQGSIG
NEPSDHVDVVGRGDLVFSFKVGENTIAVIDVEATGGNGIDTRVPSFSLLNAVAGSTGDTVRFREAWVEHAAFDERLILTA
GKIDLTNYFDANGVANDENSQFLAGAFVNSAVLGAPGNGPGARLQAKLGEPLTFGLGYGSGDTDTEDVFSHGYGIAELDY
TLKVGELEGNYRVYGSLDGARADGEVKLQEKNAFGFGISADQQVTDKLTLFVRYGQRDEDVYATKMAWSAGGQYAGLLPE
RKDDVLGFAYGQVKAVGADSQEKLAELYYKVQVNEQISIAPVVQYLINPLGDSSRDDVVALGLRSLISF

Sequences:

>Translated_469_residues
MRNMKKVLVVGLALLGSLVVGSTGAQARNPEFALPEKVEVKHKACQEILRLAATYQVEGLFSKEFEAGQVCYTRTDLAVV
LELLTEKLAEKVVKEGSAAVAKEDLVLLAELQDELRGEMLLARTRTFQQRREGLGTRLTAITKNISLSGGLVGVLQGSIG
NEPSDHVDVVGRGDLVFSFKVGENTIAVIDVEATGGNGIDTRVPSFSLLNAVAGSTGDTVRFREAWVEHAAFDERLILTA
GKIDLTNYFDANGVANDENSQFLAGAFVNSAVLGAPGNGPGARLQAKLGEPLTFGLGYGSGDTDTEDVFSHGYGIAELDY
TLKVGELEGNYRVYGSLDGARADGEVKLQEKNAFGFGISADQQVTDKLTLFVRYGQRDEDVYATKMAWSAGGQYAGLLPE
RKDDVLGFAYGQVKAVGADSQEKLAELYYKVQVNEQISIAPVVQYLINPLGDSSRDDVVALGLRSLISF
>Mature_469_residues
MRNMKKVLVVGLALLGSLVVGSTGAQARNPEFALPEKVEVKHKACQEILRLAATYQVEGLFSKEFEAGQVCYTRTDLAVV
LELLTEKLAEKVVKEGSAAVAKEDLVLLAELQDELRGEMLLARTRTFQQRREGLGTRLTAITKNISLSGGLVGVLQGSIG
NEPSDHVDVVGRGDLVFSFKVGENTIAVIDVEATGGNGIDTRVPSFSLLNAVAGSTGDTVRFREAWVEHAAFDERLILTA
GKIDLTNYFDANGVANDENSQFLAGAFVNSAVLGAPGNGPGARLQAKLGEPLTFGLGYGSGDTDTEDVFSHGYGIAELDY
TLKVGELEGNYRVYGSLDGARADGEVKLQEKNAFGFGISADQQVTDKLTLFVRYGQRDEDVYATKMAWSAGGQYAGLLPE
RKDDVLGFAYGQVKAVGADSQEKLAELYYKVQVNEQISIAPVVQYLINPLGDSSRDDVVALGLRSLISF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50333; Mature: 50333

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNMKKVLVVGLALLGSLVVGSTGAQARNPEFALPEKVEVKHKACQEILRLAATYQVEGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FSKEFEAGQVCYTRTDLAVVLELLTEKLAEKVVKEGSAAVAKEDLVLLAELQDELRGEML
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LARTRTFQQRREGLGTRLTAITKNISLSGGLVGVLQGSIGNEPSDHVDVVGRGDLVFSFK
HHHHHHHHHHHHCCCCEEEHHEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEE
VGENTIAVIDVEATGGNGIDTRVPSFSLLNAVAGSTGDTVRFREAWVEHAAFDERLILTA
ECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEEEEE
GKIDLTNYFDANGVANDENSQFLAGAFVNSAVLGAPGNGPGARLQAKLGEPLTFGLGYGS
CCEEECCEECCCCCCCCCCCCEEEEHHHCCEEECCCCCCCCCEEEECCCCCEEEEECCCC
GDTDTEDVFSHGYGIAELDYTLKVGELEGNYRVYGSLDGARADGEVKLQEKNAFGFGISA
CCCCHHHHHHCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCEEEEEECCCEECCCCC
DQQVTDKLTLFVRYGQRDEDVYATKMAWSAGGQYAGLLPERKDDVLGFAYGQVKAVGADS
CCHHHHEEEEEEEECCCCCCEEEEEEECCCCCCEECCCCCCCCCEEEEECCEEEEECCCC
QEKLAELYYKVQVNEQISIAPVVQYLINPLGDSSRDDVVALGLRSLISF
HHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MRNMKKVLVVGLALLGSLVVGSTGAQARNPEFALPEKVEVKHKACQEILRLAATYQVEGL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
FSKEFEAGQVCYTRTDLAVVLELLTEKLAEKVVKEGSAAVAKEDLVLLAELQDELRGEML
CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LARTRTFQQRREGLGTRLTAITKNISLSGGLVGVLQGSIGNEPSDHVDVVGRGDLVFSFK
HHHHHHHHHHHHCCCCEEEHHEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCEEEEEE
VGENTIAVIDVEATGGNGIDTRVPSFSLLNAVAGSTGDTVRFREAWVEHAAFDERLILTA
ECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEEEEE
GKIDLTNYFDANGVANDENSQFLAGAFVNSAVLGAPGNGPGARLQAKLGEPLTFGLGYGS
CCEEECCEECCCCCCCCCCCCEEEEHHHCCEEECCCCCCCCCEEEECCCCCEEEEECCCC
GDTDTEDVFSHGYGIAELDYTLKVGELEGNYRVYGSLDGARADGEVKLQEKNAFGFGISA
CCCCHHHHHHCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCEEEEEECCCEECCCCC
DQQVTDKLTLFVRYGQRDEDVYATKMAWSAGGQYAGLLPERKDDVLGFAYGQVKAVGADS
CCHHHHEEEEEEEECCCCCCEEEEEEECCCCCCEECCCCCCCCCEEEEECCEEEEECCCC
QEKLAELYYKVQVNEQISIAPVVQYLINPLGDSSRDDVVALGLRSLISF
HHHHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA