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The map label for this gene is 39998350

Identifier: 39998350

GI number: 39998350

Start: 3575462

End: 3576535

Strand: Direct

Name: 39998350

Synonym: GSU3260

Alternate gene names: NA

Gene position: 3575462-3576535 (Clockwise)

Preceding gene: 39998348

Following gene: 39998351

Centisome position: 93.74

GC content: 62.1

Gene sequence:

>1074_bases
ATGGCAAAAAAACTATTCATTCCCGGACCGGTCGACGTCCACCCCGAGATCCTCCAGGCCATGGCCTCTCCCATGATCGG
CCACCGCATGCCCGAATACGCAGCGCTCCACGGGCGGGTAACCGCCGGCCTCAAGCGGGTACTGGCCACGGACGGACGGG
TATTTCTCGCCACATCGAGCGCCTTCGGCGTCATGGAGGGGGCGGTACGGAACCTGGTGGCGAAGCGGTGCGTCAACTTC
TGCAACGGCGCTTTTTCCGACAAATGGCACGACGTGACCAAGCGCTGTGGCAAAGAGGCCGATGCGGTCAAGGTCGAGTG
GGGCAAGCCGATCACCCCCGAAATCGTGGATCAGGCACTGGCCACGGGCAAGTACGACGCTATCACCCTCATCCACAACG
AGACCTCCACCGGGGTCATGTCCCCCCTGCCGGAGATTGCCCGGGTCCTGCGGAACTATCCCGACGTGGTCTCCATTATC
GACACCGTCTCGTCCATGAGCGCGCTCCCCGTTCCCGTGGACGAACTGGGCATCGACTGCTGCATCTTCGGGGTTCAGAA
GGCCTTTGCCCTGCCGCCGGGATTGGCCGTTTTCACCGCCAGTGACAAGGCCCTGGCCCGTGCCAGGACAGTAGAGGGGC
GCGGCTACTATTTCGACTTCCTTGAATTCGAAGCCAACGACGAAAAAAATAACACCCCCTCGACCCCTTGCATCTCCCAC
ATTTATGCCATGGACCGACAACTGGAGCGATTCTTCGCCGAAGGCCTCGAGCAGCGATGGGCACGGCACCGGCAACTGGC
GGGAATGGTGCGCGAGTGGGTCACCGACCGGGGATTCGGGTTCTTTGCCGATGAGCCCTACCGCTCCGTAACCCTCACCT
GCGCCCTCAACACCCGGGACACGGACCTGGCCCGGTTGAAGAAGATGCTCGGCGAACGCGGCTACGCCTTTGACGACGGC
TACGGCAAGATCAAGGGTAAGACCTTCCGCGTTGCCCACATGGGAGACATGCAACGGACCGACCTGGAAGAGTTCCTGGC
AACGGCCGATGAGTGCCTGGCAGAGCTTGGCTAG

Upstream 100 bases:

>100_bases
GCTAGCTTCGAAGCCCACAACAGACTAAAAACCAACAGGTTCCCGAGCGAACCGACCCCCCAGACGGCCGGGGAGCGGCG
ACGGGAGCAGGAGAGAGTCC

Downstream 100 bases:

>100_bases
CCTATTGCTCGCGCCGATCGCGCCGGCCGCTTCCATTTGCCGTTCCTCATGGTACAAATTTGTGTTATGGTAGAGTTCAT
TGTGCCGCTCACCCCTATGT

Product: phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAKKLFIPGPVDVHPEILQAMASPMIGHRMPEYAALHGRVTAGLKRVLATDGRVFLATSSAFGVMEGAVRNLVAKRCVNF
CNGAFSDKWHDVTKRCGKEADAVKVEWGKPITPEIVDQALATGKYDAITLIHNETSTGVMSPLPEIARVLRNYPDVVSII
DTVSSMSALPVPVDELGIDCCIFGVQKAFALPPGLAVFTASDKALARARTVEGRGYYFDFLEFEANDEKNNTPSTPCISH
IYAMDRQLERFFAEGLEQRWARHRQLAGMVREWVTDRGFGFFADEPYRSVTLTCALNTRDTDLARLKKMLGERGYAFDDG
YGKIKGKTFRVAHMGDMQRTDLEEFLATADECLAELG

Sequences:

>Translated_357_residues
MAKKLFIPGPVDVHPEILQAMASPMIGHRMPEYAALHGRVTAGLKRVLATDGRVFLATSSAFGVMEGAVRNLVAKRCVNF
CNGAFSDKWHDVTKRCGKEADAVKVEWGKPITPEIVDQALATGKYDAITLIHNETSTGVMSPLPEIARVLRNYPDVVSII
DTVSSMSALPVPVDELGIDCCIFGVQKAFALPPGLAVFTASDKALARARTVEGRGYYFDFLEFEANDEKNNTPSTPCISH
IYAMDRQLERFFAEGLEQRWARHRQLAGMVREWVTDRGFGFFADEPYRSVTLTCALNTRDTDLARLKKMLGERGYAFDDG
YGKIKGKTFRVAHMGDMQRTDLEEFLATADECLAELG
>Mature_356_residues
AKKLFIPGPVDVHPEILQAMASPMIGHRMPEYAALHGRVTAGLKRVLATDGRVFLATSSAFGVMEGAVRNLVAKRCVNFC
NGAFSDKWHDVTKRCGKEADAVKVEWGKPITPEIVDQALATGKYDAITLIHNETSTGVMSPLPEIARVLRNYPDVVSIID
TVSSMSALPVPVDELGIDCCIFGVQKAFALPPGLAVFTASDKALARARTVEGRGYYFDFLEFEANDEKNNTPSTPCISHI
YAMDRQLERFFAEGLEQRWARHRQLAGMVREWVTDRGFGFFADEPYRSVTLTCALNTRDTDLARLKKMLGERGYAFDDGY
GKIKGKTFRVAHMGDMQRTDLEEFLATADECLAELG

Specific function: Unknown

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=347, Percent_Identity=25.0720461095101, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17536281, Length=364, Percent_Identity=26.0989010989011, Blast_Score=130, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6321079, Length=356, Percent_Identity=26.123595505618, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI17530823, Length=360, Percent_Identity=25.8333333333333, Blast_Score=104, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 39512; Mature: 39381

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKLFIPGPVDVHPEILQAMASPMIGHRMPEYAALHGRVTAGLKRVLATDGRVFLATSS
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC
AFGVMEGAVRNLVAKRCVNFCNGAFSDKWHDVTKRCGKEADAVKVEWGKPITPEIVDQAL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
ATGKYDAITLIHNETSTGVMSPLPEIARVLRNYPDVVSIIDTVSSMSALPVPVDELGIDC
HCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCHHH
CIFGVQKAFALPPGLAVFTASDKALARARTVEGRGYYFDFLEFEANDEKNNTPSTPCISH
HHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHH
IYAMDRQLERFFAEGLEQRWARHRQLAGMVREWVTDRGFGFFADEPYRSVTLTCALNTRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCC
TDLARLKKMLGERGYAFDDGYGKIKGKTFRVAHMGDMQRTDLEEFLATADECLAELG
CHHHHHHHHHCCCCCEECCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKKLFIPGPVDVHPEILQAMASPMIGHRMPEYAALHGRVTAGLKRVLATDGRVFLATSS
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECC
AFGVMEGAVRNLVAKRCVNFCNGAFSDKWHDVTKRCGKEADAVKVEWGKPITPEIVDQAL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
ATGKYDAITLIHNETSTGVMSPLPEIARVLRNYPDVVSIIDTVSSMSALPVPVDELGIDC
HCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHCHHH
CIFGVQKAFALPPGLAVFTASDKALARARTVEGRGYYFDFLEFEANDEKNNTPSTPCISH
HHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHHHH
IYAMDRQLERFFAEGLEQRWARHRQLAGMVREWVTDRGFGFFADEPYRSVTLTCALNTRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCC
TDLARLKKMLGERGYAFDDGYGKIKGKTFRVAHMGDMQRTDLEEFLATADECLAELG
CHHHHHHHHHCCCCCEECCCCCEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]