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The map label for this gene is 39998312

Identifier: 39998312

GI number: 39998312

Start: 3533249

End: 3534487

Strand: Direct

Name: 39998312

Synonym: GSU3222

Alternate gene names: NA

Gene position: 3533249-3534487 (Clockwise)

Preceding gene: 39998311

Following gene: 39998313

Centisome position: 92.64

GC content: 61.1

Gene sequence:

>1239_bases
ATGAAGCCGCGTTTCGCCGTAGCCCACCGTCCTTTCACACAAGCTGCCCGGCTGTTCCTGCTCTGTTCGCTGCTCTGGAT
CAGCGGATGTGCCGGTAAAACCGGCACTGCGGGAAAGACCTTTTTTCCGCCGCCTCCCAACCTGCCCCGGCTCCAGTACC
TGATGGGGATTGCCAACTCGACCGATGTGGAAGGGAAGGATTCATCGTTTTCCCTCTTCGGGGGATTGGCCGAGCAACGC
GAAAAGATCCGCTACATCGTGAAGCCGTACGGCATTACCGAGGCCGGCGGCAAGCTCTACGTGAGCGATGTGGGAACCGC
CCAGATCGTCGTCATCGACCTGCCGGGCAAAAAATTCGAGCTGCTCAAGGGGGCTGCCGGACCTGGCAAGCTGACCACTC
CGGCCAACGTGGCCGTGGACAAGGACGGCTTCATCTACGTGGCCGACGCGGGCCGGAGAGAGGTGGTGGTATTCACGCCG
GAAGGCGATTTCCTCAAGGCCATCGGCGGGGACCGGGACATGAAGCCCGTGGATGTGGTCGTTAGCGGCGACCGGGCCTT
CGTGCTCGACATCAAAAGCAGCGATATCAAAGTGTTCAACGTCAAGAGCGGCCAGTATCTCGAAAGTTTCGGCACAGCGG
GCGGCCCCTTCGAGCGGCTCGCCATGCCCATCAACCTGGCCATGGACTCCAAGGGGTTTCTCTATGCCACCAACGGGGTC
AGCGGCAGAGTCCTCAAATTCGACCGGGACGGCAACCTGCTGCTCTCCTTCGGCCAGATGGGTGATGGCTTCGGCCAGTT
CGCCCGCCCCAAGGGAATCGCGGTGGATCCCACCGGACTGATCCACGTGGTTGACGGCGGACATCAGAACGTTCAGCTCT
TTTCGGATACGGGACGCCTGCTCCTCTTCTACGGCGACGCGGGCAAGGATAGCACCGCATCACTGAATCTCCCGGCAGGG
ATCGCCTATTCCACGGCCAACCTGGAGTACTTCCAGAAAATGGCGGACTCTTCCTTCAAGCTGGACGGCGTGGTGTTCGT
CACCAACCAGGGGGGGAAAGCGAACAAGGTGGCCGTGTACGGGTACGGCAAACGCGAAGGGATCGATTACGAGCAGGAGT
ACGAGAAAATCCGCAAGGAACTGGAAGAGCGTGCACGGAAAGCCCGCGAAAAGGAGGCCCAGGAGGGGAAGAAGGCTGGC
CAGGCCGAACCCAAGGCTGCGGAACCCGCCGCGAAGTAG

Upstream 100 bases:

>100_bases
GTCGGGCAGCGGCCTTTTCACCAACACAATCATATAAAAACCGTAATAATACGAATTTACAACTGGTTATCATCCTCCAC
CCTATTCCGAGGAGGTTTTC

Downstream 100 bases:

>100_bases
CCTGATGAGGCGCGCATCGGCATGAGAAGGTCTGTTGCTGTGATATGGCTGTTGCGGGTGGGGCTGGGTGCCCTTGCACT
CTGCCTGACCGCCTGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Protein; Tripartite Motif-Containing Protein; PA14 Domain-Containing Protein; Fibronectin Type III Domain Protein; Tetratricopeptide Repeat-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; PKD Domain Containing Protein; Cell Surface Protein; NHL Repeat Domain Protein; Surface Layer Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKPRFAVAHRPFTQAARLFLLCSLLWISGCAGKTGTAGKTFFPPPPNLPRLQYLMGIANSTDVEGKDSSFSLFGGLAEQR
EKIRYIVKPYGITEAGGKLYVSDVGTAQIVVIDLPGKKFELLKGAAGPGKLTTPANVAVDKDGFIYVADAGRREVVVFTP
EGDFLKAIGGDRDMKPVDVVVSGDRAFVLDIKSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNGV
SGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLFSDTGRLLLFYGDAGKDSTASLNLPAG
IAYSTANLEYFQKMADSSFKLDGVVFVTNQGGKANKVAVYGYGKREGIDYEQEYEKIRKELEERARKAREKEAQEGKKAG
QAEPKAAEPAAK

Sequences:

>Translated_412_residues
MKPRFAVAHRPFTQAARLFLLCSLLWISGCAGKTGTAGKTFFPPPPNLPRLQYLMGIANSTDVEGKDSSFSLFGGLAEQR
EKIRYIVKPYGITEAGGKLYVSDVGTAQIVVIDLPGKKFELLKGAAGPGKLTTPANVAVDKDGFIYVADAGRREVVVFTP
EGDFLKAIGGDRDMKPVDVVVSGDRAFVLDIKSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNGV
SGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLFSDTGRLLLFYGDAGKDSTASLNLPAG
IAYSTANLEYFQKMADSSFKLDGVVFVTNQGGKANKVAVYGYGKREGIDYEQEYEKIRKELEERARKAREKEAQEGKKAG
QAEPKAAEPAAK
>Mature_412_residues
MKPRFAVAHRPFTQAARLFLLCSLLWISGCAGKTGTAGKTFFPPPPNLPRLQYLMGIANSTDVEGKDSSFSLFGGLAEQR
EKIRYIVKPYGITEAGGKLYVSDVGTAQIVVIDLPGKKFELLKGAAGPGKLTTPANVAVDKDGFIYVADAGRREVVVFTP
EGDFLKAIGGDRDMKPVDVVVSGDRAFVLDIKSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNGV
SGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLFSDTGRLLLFYGDAGKDSTASLNLPAG
IAYSTANLEYFQKMADSSFKLDGVVFVTNQGGKANKVAVYGYGKREGIDYEQEYEKIRKELEERARKAREKEAQEGKKAG
QAEPKAAEPAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32454739, Length=233, Percent_Identity=33.9055793991416, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI32454737, Length=233, Percent_Identity=33.9055793991416, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI84993742, Length=248, Percent_Identity=31.0483870967742, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI194248079, Length=269, Percent_Identity=29.368029739777, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI194248081, Length=269, Percent_Identity=29.368029739777, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17553622, Length=229, Percent_Identity=30.5676855895196, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71980716, Length=119, Percent_Identity=34.453781512605, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71980713, Length=119, Percent_Identity=34.453781512605, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24655386, Length=210, Percent_Identity=30.4761904761905, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI22024206, Length=210, Percent_Identity=30.4761904761905, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI221330419, Length=210, Percent_Identity=30.4761904761905, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI221330033, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330031, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24586266, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24586264, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI22026822, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44396; Mature: 44396

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51125 NHL L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRFAVAHRPFTQAARLFLLCSLLWISGCAGKTGTAGKTFFPPPPNLPRLQYLMGIANS
CCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
TDVEGKDSSFSLFGGLAEQREKIRYIVKPYGITEAGGKLYVSDVGTAQIVVIDLPGKKFE
CCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEECCCCEEEEEECCCEEEEEEECCCCHHH
LLKGAAGPGKLTTPANVAVDKDGFIYVADAGRREVVVFTPEGDFLKAIGGDRDMKPVDVV
HHCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEECCCCCCCEECCCCCCCCEEEEE
VSGDRAFVLDIKSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNGV
EECCEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCHHHHEEEEEEEECCCCCEEEECCC
SGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLFSDTGRL
CCEEEEEECCCCEEEEECCCCCCCHHHCCCCCEEECCCCEEEEEECCCCEEEEEECCCCE
LLFYGDAGKDSTASLNLPAGIAYSTANLEYFQKMADSSFKLDGVVFVTNQGGKANKVAVY
EEEECCCCCCCCEEEECCCCEEEECCCHHHHHHHHCCCEEECEEEEEECCCCCCCEEEEE
GYGKREGIDYEQEYEKIRKELEERARKAREKEAQEGKKAGQAEPKAAEPAAK
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPRFAVAHRPFTQAARLFLLCSLLWISGCAGKTGTAGKTFFPPPPNLPRLQYLMGIANS
CCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
TDVEGKDSSFSLFGGLAEQREKIRYIVKPYGITEAGGKLYVSDVGTAQIVVIDLPGKKFE
CCCCCCCCCCHHHHHHHHHHHHEEEEECCCCEECCCCEEEEEECCCEEEEEEECCCCHHH
LLKGAAGPGKLTTPANVAVDKDGFIYVADAGRREVVVFTPEGDFLKAIGGDRDMKPVDVV
HHCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEEECCCCCCCEECCCCCCCCEEEEE
VSGDRAFVLDIKSSDIKVFNVKSGQYLESFGTAGGPFERLAMPINLAMDSKGFLYATNGV
EECCEEEEEEECCCCEEEEEECCCCHHHHHCCCCCCHHHHEEEEEEEECCCCCEEEECCC
SGRVLKFDRDGNLLLSFGQMGDGFGQFARPKGIAVDPTGLIHVVDGGHQNVQLFSDTGRL
CCEEEEEECCCCEEEEECCCCCCCHHHCCCCCEEECCCCEEEEEECCCCEEEEEECCCCE
LLFYGDAGKDSTASLNLPAGIAYSTANLEYFQKMADSSFKLDGVVFVTNQGGKANKVAVY
EEEECCCCCCCCEEEECCCCEEEECCCHHHHHHHHCCCEEECEEEEEECCCCCCCEEEEE
GYGKREGIDYEQEYEKIRKELEERARKAREKEAQEGKKAGQAEPKAAEPAAK
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA