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The map label for this gene is 39998281

Identifier: 39998281

GI number: 39998281

Start: 3496790

End: 3498706

Strand: Reverse

Name: 39998281

Synonym: GSU3191

Alternate gene names: NA

Gene position: 3498706-3496790 (Counterclockwise)

Preceding gene: 39998297

Following gene: 39998279

Centisome position: 91.73

GC content: 58.95

Gene sequence:

>1917_bases
GTGAAAAAATACCTTACACTCTTCGTGCTTTCCCTGTCGGCCGCGACCGCGCTGGGGGGGGAGGCAGTTGCCGCCCAGGA
GCGGTGCTGGGAGGCGAAGAGGCTTGTCAAATCACTTTCGGGCGAGGATGAGGACGCCCGGGCGAATACTGAAAAACGAA
TCCTCGAATATTGCTCCGACGGCGCTGCCGGCCATTTCGTCAAGGGGCTCCGGGCCGAGCGTGAAAAACGCTTCGACCAG
GCGGTGACGGAATATCGCGAAACGCTCCGGATGGACCCTTCGTTTCCCGATGCCCAAGGAAGTCTCGGCCTGGCCCTGCT
GGCCAAGGGTTCCGCCGACGAGGCCGTGGTGGAACTGACCCGCGCCCTGGCCGAAGATTCCAAGCCCCGCTATCATCAGG
GCCTCGGCAAAATTTTTGCTGAACGCTCCCTCTATTCCCTAGCCCTTTATCATTATGCCGAAGCCCTGCGCGAACTCCCC
GACGACCCGTCGATTCGTGTGGACCTCGCACAGGTCTACCGGCAGGCAGGCAAAAAGGAAGAGGCGGAGAAGGAGCTGAA
AAAGGCCCTCACCGTTGCTCCGGCCAATGAAAATGCCCGCCTTGCCCTCGCATCTCTCTATCTGGCCGATGGCCGCACCG
AAGGCGCGGTCCAGGAACTCAAGCAGGCCCAACTGGCCAATCCCGGCAACCGCGGCATCCACCTCCTCCTTGCAGAAGCA
TATGAAAAACTTGGTGATCGCAAGGCCGCCGAGTACGAATACACCCTTTCCGGGCGCCAACGAGGCGTCCTTCCCGAAGA
ATACCTCCGTCGGGGTGACGAACGGATGGCAGCCAAAGAGTTCCCCAAGGCCGTGGAGGAGTACCGTGCTGCCCTGAAAG
AGCGTCCCGGGTCCGCGGAGGTGCTGCATAAGCTGTCCGGTGCCCAGGCAGCCGCGGGGCTCGATGACGATGCCATTGCA
TCCTACCGCGAACTGCTGCGAGTAAAGCCCGGCAATGCCGCTAATCATTACAACCTCGGCATTATCTACGAGCGCAAGGG
GCTCATCGACGAGGCCGTGGTGGAATACAAACAGGCGGTTCGACTCTCTGCCGAGCACGGTGACGCCCGGCGCCGACTCG
CCGATATCTACACCCTGCGCGGCAGCCATCCCCAAGCCATTGAGCAGTACCGCGAACTCCTCAAGCGGGGCGACAGCAAT
CCCGTCCTCCATCTCAAGCTTGCCCGCGGTTTCATGTCCTCGAAGAACACCAAGGATGCCATAGCCTCTTACAACGAGGC
CCTCAAACTGGACCCGGACAACCTGGAAGCCCATCGGGAACTCGCTGCCGTCTACCGCAAGTTGAACCAGATGGACGACG
CGTCCAAGCAGTATCGCGAGGTGCTCCGCATCAAAAAAGACGATGCCGAGGCCCGCAACATCCTGACAGCTATTTACGTC
AAGGAGAAGAAATACGATGAACTGGTCCCCCTTCTCCAGGAAGGGGTCGAATTGGCTCCCAACGATGCCATGAGCCACTA
CAAGCTCGGGCTCATTCATGAATTCCGCAAGGACTACGATTCAGCCGAGGTGAGCTACCGGAAAGCGACCGAACTCAAGG
ATGATCACGCAAAGGCTCTCAACGCCCTGGGGCGCATCTATCTGAAAACCGGCAAACTTACCGAGGCCAAGGAGGCCCTG
GAAGCGGCCAAAAAGGCCGACCCTGGCATGGAAGAGACGGCTGTTCTTCTCAGCAACATCAAGGATGAGCTGAGCCCGGA
GCCGAAGCGGTACGTGAAGAAGAAAGGGACCAAAGGGCGCAAGTCCGCCGTTTCCAAGAAGAGGTCCGGCAAGAAAAGCT
CCGCCAAGAAGAGTACAACGAAAAAGAAATCGACGAAAAAGAGTTCGTCGTCCGGAAAGAAAAAAAGCGGCACATAA

Upstream 100 bases:

>100_bases
CCGCATTATCCGTTCCGGCCCAGGCCTGCCCGCCAGGCACCGACCCTTGCGAACCTCACGTTGCGGCGAGTTCGCAGCAA
ACCACTCTGGGAGGACCTTT

Downstream 100 bases:

>100_bases
TCAGTGGGCCGGTTGCGCCGCAGATTCGGGAGAAAACGTCCGGCGCGGCGGGATGGAGCCTGATGCATAACAAAAAGGGG
GCGGCGGATTGCCGGCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Sulfotransferase; Peptidase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; TPR Domain Containing Protein; TPR Domain Protein; Tetratricopeptide Repeat-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Glycosyl Transferase Family Protein; Tetratricopeptide Repeat Domain Protein; PEP-CTERM System TPR-Repeat Lipoprotein; TPR Repeat Containing Protein; Methyltransferase Type; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeat; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat-Containing Methyltransferase; Tetratricopeptide Domain Protein; Protein Kinase; TPR Repeat Protein Weakly Eukaryotic Proteins; O-Linked GlcNAc Transferase; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MKKYLTLFVLSLSAATALGGEAVAAQERCWEAKRLVKSLSGEDEDARANTEKRILEYCSDGAAGHFVKGLRAEREKRFDQ
AVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAVVELTRALAEDSKPRYHQGLGKIFAERSLYSLALYHYAEALRELP
DDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAPANENARLALASLYLADGRTEGAVQELKQAQLANPGNRGIHLLLAEA
YEKLGDRKAAEYEYTLSGRQRGVLPEEYLRRGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQAAAGLDDDAIA
SYRELLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSN
PVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYV
KEKKYDELVPLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKALNALGRIYLKTGKLTEAKEAL
EAAKKADPGMEETAVLLSNIKDELSPEPKRYVKKKGTKGRKSAVSKKRSGKKSSAKKSTTKKKSTKKSSSSGKKKSGT

Sequences:

>Translated_638_residues
MKKYLTLFVLSLSAATALGGEAVAAQERCWEAKRLVKSLSGEDEDARANTEKRILEYCSDGAAGHFVKGLRAEREKRFDQ
AVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAVVELTRALAEDSKPRYHQGLGKIFAERSLYSLALYHYAEALRELP
DDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAPANENARLALASLYLADGRTEGAVQELKQAQLANPGNRGIHLLLAEA
YEKLGDRKAAEYEYTLSGRQRGVLPEEYLRRGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQAAAGLDDDAIA
SYRELLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSN
PVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYV
KEKKYDELVPLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKALNALGRIYLKTGKLTEAKEAL
EAAKKADPGMEETAVLLSNIKDELSPEPKRYVKKKGTKGRKSAVSKKRSGKKSSAKKSTTKKKSTKKSSSSGKKKSGT
>Mature_638_residues
MKKYLTLFVLSLSAATALGGEAVAAQERCWEAKRLVKSLSGEDEDARANTEKRILEYCSDGAAGHFVKGLRAEREKRFDQ
AVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAVVELTRALAEDSKPRYHQGLGKIFAERSLYSLALYHYAEALRELP
DDPSIRVDLAQVYRQAGKKEEAEKELKKALTVAPANENARLALASLYLADGRTEGAVQELKQAQLANPGNRGIHLLLAEA
YEKLGDRKAAEYEYTLSGRQRGVLPEEYLRRGDERMAAKEFPKAVEEYRAALKERPGSAEVLHKLSGAQAAAGLDDDAIA
SYRELLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAVRLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSN
PVLHLKLARGFMSSKNTKDAIASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYV
KEKKYDELVPLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKALNALGRIYLKTGKLTEAKEAL
EAAKKADPGMEETAVLLSNIKDELSPEPKRYVKKKGTKGRKSAVSKKRSGKKSSAKKSTTKKKSTKKSSSSGKKKSGT

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=396, Percent_Identity=26.010101010101, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI32307148, Length=396, Percent_Identity=26.010101010101, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI301336134, Length=425, Percent_Identity=23.7647058823529, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI83415184, Length=425, Percent_Identity=24.2352941176471, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI38146008, Length=257, Percent_Identity=24.5136186770428, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI38146012, Length=257, Percent_Identity=24.5136186770428, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI53759120, Length=257, Percent_Identity=24.5136186770428, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI167466175, Length=186, Percent_Identity=24.7311827956989, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI167466177, Length=186, Percent_Identity=24.7311827956989, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=393, Percent_Identity=24.6819338422392, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI115532690, Length=393, Percent_Identity=24.6819338422392, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI17647755, Length=531, Percent_Identity=23.728813559322, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24585827, Length=531, Percent_Identity=23.728813559322, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24585829, Length=531, Percent_Identity=23.728813559322, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24659892, Length=231, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70968; Mature: 70968

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYLTLFVLSLSAATALGGEAVAAQERCWEAKRLVKSLSGEDEDARANTEKRILEYCSD
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCC
GAAGHFVKGLRAEREKRFDQAVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAVVELT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
RALAEDSKPRYHQGLGKIFAERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCHH
EAEKELKKALTVAPANENARLALASLYLADGRTEGAVQELKQAQLANPGNRGIHLLLAEA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
YEKLGDRKAAEYEYTLSGRQRGVLPEEYLRRGDERMAAKEFPKAVEEYRAALKERPGSAE
HHHHCCCCCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VLHKLSGAQAAAGLDDDAIASYRELLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAV
HHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
RLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLKLARGFMSSKNTKDA
HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCHHH
IASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KEKKYDELVPLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKAL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
NALGRIYLKTGKLTEAKEALEAAKKADPGMEETAVLLSNIKDELSPEPKRYVKKKGTKGR
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
KSAVSKKRSGKKSSAKKSTTKKKSTKKSSSSGKKKSGT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKYLTLFVLSLSAATALGGEAVAAQERCWEAKRLVKSLSGEDEDARANTEKRILEYCSD
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHCC
GAAGHFVKGLRAEREKRFDQAVTEYRETLRMDPSFPDAQGSLGLALLAKGSADEAVVELT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
RALAEDSKPRYHQGLGKIFAERSLYSLALYHYAEALRELPDDPSIRVDLAQVYRQAGKKE
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCHH
EAEKELKKALTVAPANENARLALASLYLADGRTEGAVQELKQAQLANPGNRGIHLLLAEA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
YEKLGDRKAAEYEYTLSGRQRGVLPEEYLRRGDERMAAKEFPKAVEEYRAALKERPGSAE
HHHHCCCCCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VLHKLSGAQAAAGLDDDAIASYRELLRVKPGNAANHYNLGIIYERKGLIDEAVVEYKQAV
HHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
RLSAEHGDARRRLADIYTLRGSHPQAIEQYRELLKRGDSNPVLHLKLARGFMSSKNTKDA
HHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCHHH
IASYNEALKLDPDNLEAHRELAAVYRKLNQMDDASKQYREVLRIKKDDAEARNILTAIYV
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KEKKYDELVPLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRKATELKDDHAKAL
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH
NALGRIYLKTGKLTEAKEALEAAKKADPGMEETAVLLSNIKDELSPEPKRYVKKKGTKGR
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
KSAVSKKRSGKKSSAKKSTTKKKSTKKSSSSGKKKSGT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA