Click here to switch to the map view.

The map label for this gene is 39998271

Identifier: 39998271

GI number: 39998271

Start: 3489250

End: 3490293

Strand: Direct

Name: 39998271

Synonym: GSU3181

Alternate gene names: NA

Gene position: 3489250-3490293 (Clockwise)

Preceding gene: 39998270

Following gene: 39998272

Centisome position: 91.48

GC content: 60.06

Gene sequence:

>1044_bases
ATGAGGACCCTGGCGATTACCGGGGCAAGCTGCGTTACTGCCGTAGGGCATGACGGCCCCTCGACGGCGGCTTCAGTCAG
GGCGGGAATCTCCCGCTTTGCCGAGTACGACGACTATCGGGACGAAAACGACAACCCTATCACCGCGGCGCGAATCTGTG
GGATTCATGACAGCTGGGATACCCCCCAGCGGATGGCCGGTGTCGCCGCTCTTTGCCTTGAAAAGCTCCTTGACGAGTAT
TTTCGTCGAGACGCACGTAGGCCTTCACAGATCCATCTCTTCCTTGGAGTAGCCTCCGACGAACGGCCCGGTCCGCGCTA
TGAAGAAAGCAGCCTGTTCCCGTTGCGCGGGATAATCGGGAAATGGACGGACAAACCCGGCCTTCAGGCTATCCGCCGGG
GAAACGCATCCATGATGTGCTCCCTTGAACAGGCCGGTCGCCTGATCGACAGCAATCCCGACGCGGTGTGCATCGTCGGC
GGAGTTGATTCATTGCTAAGAACCTCGACCCTGAATTGGTTCGAAAAGGACTGCCGCCTCAAATCCGCAAGCTATGGCCG
TCACCAGGGGCTCATTGCCGGAGAGGCGGTCGGGTTCATGGTCATTGGAGAACACGCAGGAGCAAAGCAGGCAGACAGGC
CGATCCTCGGGAGTATTGCAGGGCTTGGGCTGGCAGTAGAACCAGCGCCGCGGGCATCGAGCGCCCTCGGACGAAACAGC
GGGCTCACCGAGGCCTGCCATGCCGCCCTGAGCGGGGTGCAAAAAAAGGCGATCCGCGCGATATTCAGCGATCTCAATGG
TGAAAACTCCCGAGCAAGGGAATGGGGCATGGCCGAAATGCGCTGTTTCGACAAACCGGATGAAAGCAGGCGGCTCTGGA
CGCCGGCTAACTGCTACGGCGACATCGGCGCCGCCAGCGGCGTGGCCTTGGCAAGTATTGCCATGCAAGGGCTTGTTCGT
GGATGGTTGCAATCGCCGATACTGGTAACCTGCTCCGATGACCATGGGCCATGCGGTGCCTTGGTATTGGAGAGCGAGAA
ATAG

Upstream 100 bases:

>100_bases
GTGCGGCTGCCGCCCTTGAGCTGGCGCGAATGAATCCTGGGCGACCGATGTTTGAAGTGCGGGCACCAGCGGCCAGACAG
CGCAAAGAGGTTGCGGCCAT

Downstream 100 bases:

>100_bases
AATCCCCAAGGAGGCGATCGTGGGAAAATCAACGGTTTTCGTTAACAAACAGGGAATGAGCAACAAAGGGAGTGGAGCTG
TTGTCGTAAGCGGTCCGGAT

Product: 3-oxoacyl-ACP synthase

Products: NA

Alternate protein names: 3-Oxoacyl-(Acyl-Carrier-Protein) Synthase; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase Protein

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MRTLAITGASCVTAVGHDGPSTAASVRAGISRFAEYDDYRDENDNPITAARICGIHDSWDTPQRMAGVAALCLEKLLDEY
FRRDARRPSQIHLFLGVASDERPGPRYEESSLFPLRGIIGKWTDKPGLQAIRRGNASMMCSLEQAGRLIDSNPDAVCIVG
GVDSLLRTSTLNWFEKDCRLKSASYGRHQGLIAGEAVGFMVIGEHAGAKQADRPILGSIAGLGLAVEPAPRASSALGRNS
GLTEACHAALSGVQKKAIRAIFSDLNGENSRAREWGMAEMRCFDKPDESRRLWTPANCYGDIGAASGVALASIAMQGLVR
GWLQSPILVTCSDDHGPCGALVLESEK

Sequences:

>Translated_347_residues
MRTLAITGASCVTAVGHDGPSTAASVRAGISRFAEYDDYRDENDNPITAARICGIHDSWDTPQRMAGVAALCLEKLLDEY
FRRDARRPSQIHLFLGVASDERPGPRYEESSLFPLRGIIGKWTDKPGLQAIRRGNASMMCSLEQAGRLIDSNPDAVCIVG
GVDSLLRTSTLNWFEKDCRLKSASYGRHQGLIAGEAVGFMVIGEHAGAKQADRPILGSIAGLGLAVEPAPRASSALGRNS
GLTEACHAALSGVQKKAIRAIFSDLNGENSRAREWGMAEMRCFDKPDESRRLWTPANCYGDIGAASGVALASIAMQGLVR
GWLQSPILVTCSDDHGPCGALVLESEK
>Mature_347_residues
MRTLAITGASCVTAVGHDGPSTAASVRAGISRFAEYDDYRDENDNPITAARICGIHDSWDTPQRMAGVAALCLEKLLDEY
FRRDARRPSQIHLFLGVASDERPGPRYEESSLFPLRGIIGKWTDKPGLQAIRRGNASMMCSLEQAGRLIDSNPDAVCIVG
GVDSLLRTSTLNWFEKDCRLKSASYGRHQGLIAGEAVGFMVIGEHAGAKQADRPILGSIAGLGLAVEPAPRASSALGRNS
GLTEACHAALSGVQKKAIRAIFSDLNGENSRAREWGMAEMRCFDKPDESRRLWTPANCYGDIGAASGVALASIAMQGLVR
GWLQSPILVTCSDDHGPCGALVLESEK

Specific function: Unknown

COG id: COG0304

COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37173; Mature: 37173

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLAITGASCVTAVGHDGPSTAASVRAGISRFAEYDDYRDENDNPITAARICGIHDSWD
CCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECCCCCCC
TPQRMAGVAALCLEKLLDEYFRRDARRPSQIHLFLGVASDERPGPRYEESSLFPLRGIIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
KWTDKPGLQAIRRGNASMMCSLEQAGRLIDSNPDAVCIVGGVDSLLRTSTLNWFEKDCRL
CCCCCHHHHHHHCCCHHEEEEHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
KSASYGRHQGLIAGEAVGFMVIGEHAGAKQADRPILGSIAGLGLAVEPAPRASSALGRNS
CCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHCCCC
GLTEACHAALSGVQKKAIRAIFSDLNGENSRAREWGMAEMRCFDKPDESRRLWTPANCYG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCCCCCCEECCCCCCC
DIGAASGVALASIAMQGLVRGWLQSPILVTCSDDHGPCGALVLESEK
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCC
>Mature Secondary Structure
MRTLAITGASCVTAVGHDGPSTAASVRAGISRFAEYDDYRDENDNPITAARICGIHDSWD
CCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHEEECCCCCCC
TPQRMAGVAALCLEKLLDEYFRRDARRPSQIHLFLGVASDERPGPRYEESSLFPLRGIIG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
KWTDKPGLQAIRRGNASMMCSLEQAGRLIDSNPDAVCIVGGVDSLLRTSTLNWFEKDCRL
CCCCCHHHHHHHCCCHHEEEEHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
KSASYGRHQGLIAGEAVGFMVIGEHAGAKQADRPILGSIAGLGLAVEPAPRASSALGRNS
CCCCCCCCCCCEECCCEEEEEEECCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHCCCC
GLTEACHAALSGVQKKAIRAIFSDLNGENSRAREWGMAEMRCFDKPDESRRLWTPANCYG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCCCCCCEECCCCCCC
DIGAASGVALASIAMQGLVRGWLQSPILVTCSDDHGPCGALVLESEK
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA