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The map label for this gene is 39998267

Identifier: 39998267

GI number: 39998267

Start: 3485350

End: 3487443

Strand: Direct

Name: 39998267

Synonym: GSU3177

Alternate gene names: NA

Gene position: 3485350-3487443 (Clockwise)

Preceding gene: 39998266

Following gene: 39998268

Centisome position: 91.38

GC content: 57.31

Gene sequence:

>2094_bases
ATGACAATCCAAAAGGCCGCGGCAAGCCTCCTTTCTCAGGGCTCAACATCAAGCTTTCAGTTCGAGATTCCCGCCACCAG
GCACTTACTGTCGGTAGCGGGATTCACCGTCGACGAGCGTATATCCCATCCCTATGACATCCACCTCACCCTGGCCACAA
AGGACAATGTGGATCTCGACGAGGTGATCGACAAGGAAGCCGTGCTTTCCGTAGATCATGAGGGCGGAACGCGCTATTTC
CACGGTGTTGTCCGGGAATTCACCTCTCTCGGGACGGACGGCGACTACGACCTCTACCACGCCCACATTGTGCCGGCCCT
GTGGTTCCTTTCGCTGGAGCAGGATTGCCGTGTTTTCCAGTTCAAGAACGTTCAGGACATAGTCGCCGAAATCCTCGAAG
AGAGTAATATCACCAGTGACCGCTACCGCTTCGCACTCTCCAGGGAGGACCGCCTGCGCAAATTCTGCGTCCAGTACCGG
GAAACGGACCTGAACTTTGTCTCGCGACTTCTCGAAGAGGAGGGAATCTTCTACTTTTTCGAGCACTACGAAGACAAGCA
CGTCATCGTCTTTTCCGACACCGGCTCAGGCTATCTCTACATGCCCGGCAAGCGCCAGATCCCCTTCAACACCAATGACG
GCATGGTGCCCGGAAAGGAGAGCGTCTTCGACTTCATCTACTCGCGCCGCGTTCGCCCCGGCAAGGTGTCACAGCGCGAT
TATTGCTACAAGCACACGAACCTCGACTTGACCACCCAGCGGCAGGGAAAGGTGTCCGCTCAGCGGGAGGTCTACGACTT
CCCCGGCAATTACTTCAATGAGGAACGAGGTACCTATCTGGCCAACGTCCGCCTGGAGCGATTGCTGGTGCTCGGCGCGA
CCGCAGAAGGGCAGAGTTCGTGCCCTCGCATGATGCCGGGACACGAGTGGGAACTTTCCGGCCACGATTATGCCGGGAAG
TATCTGCCAGTGGCAGTCATCCATCATGGCGCTCAGCCCCAGGTGCTTGGCGAGCATGCCGGAGATGGCGGCTTTCGCTA
CGACAACGAATTTATCGCCGTGCCGGCCGCCGTAACGGTCCGCCCCCAGATTGTCGCCGGCAGGCCCGCCATCGTCGGAC
TCCAGACTGCCGTCGTTACCGGCTCGCCCGGCGAAGAAATCCACGCCGACCCCGACGGCTACCTGCGGGTGAAAGTGCAG
TTTCCCTGGGACCGGCGTGGCCGGAAGGATGGCAGGACCTCATGCTGGGTCAGGGTCGGCCAGCCCTGGGGAGGCGGTGG
ATGGGGAACCCAGTTTCTGCCCCGTGTTGGAGACGAGGTGCTTGTCACGTTCCTTGAAGGCGACCCCGACCGCCCCATGG
TAATCGGCAGTGCGTACAACTCCGAAAATCAACCACTGTACGCTTTGCCCGCCAGTAAAACCCAGAGCGGCATCCGCACC
CGCAGCTACCCAAACGGCGGTACTGACAATTTCCATGAACTCCGCTTCGAGGATAAGAAGGGAAGCGAGGAGATCTACCT
GCAGAGCGAAAAGGACTGGAACATTCTGGTTAAAAACGACAAGGGGCAGACTGTCGGGCGGAACGAGAGCCTGACCGTCG
GCAACAACCGCTCAAAAACGGTGGGGGTGGATCAGAGCGAGAGTGTCGGTGTCAACAAGTCCATCCAGGTAGGGGCAAAC
CACAACGAAAGCATCGGCGCCAACATGACTCTGAGCGTAGGCGGTTTCAAGAATGAGACTGTCGGCATAAATTCACTCGA
AACAATCGGCGGTGCAAAGGAGCTAGCCATTGGCGGCCTCTACCAAGTTGCGGTAGGCGGCGTCATGAACGAGACGGTTG
CCGGCGCCAAAACGGAAGAAGTCGGACTGGCAAAAGCGGTGTTCGTCGGCAACAACATGAGTGAGAACGTAAAAGGTGAC
AGAACCACCAATACAAACGGCAACTACACGGAAACCATCAGCGCCAAATATTACGCCAAAGCTGACGAATATGTCATCGA
GGCGCCCAAAATCACGCTTAAGGCCGGTTCTTCATCCATTGTCATGGATGGGAGCAGCATAACGATCAAGGCGAGCAAAA
TTTTCCAGAATTGA

Upstream 100 bases:

>100_bases
GGGGAGAAACATTTGTCGGAGGATTCCGCAAGAAATGGAACTGAGGGGGTCATCGCCACCGCCTCTCTGAGCAATTCGTA
AGTTTCACGAGGAAAACGCC

Downstream 100 bases:

>100_bases
ACCCAGGGCCACGGGATATGCGGAGAATGATGTGAGAAAAAAGGCTTCAGCTATTTCGTTTGGAATTAACGGCACCCTGT
CGGAAGGGTTTCGCGTCGGC

Product: Rhs family protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 697; Mature: 696

Protein sequence:

>697_residues
MTIQKAAASLLSQGSTSSFQFEIPATRHLLSVAGFTVDERISHPYDIHLTLATKDNVDLDEVIDKEAVLSVDHEGGTRYF
HGVVREFTSLGTDGDYDLYHAHIVPALWFLSLEQDCRVFQFKNVQDIVAEILEESNITSDRYRFALSREDRLRKFCVQYR
ETDLNFVSRLLEEEGIFYFFEHYEDKHVIVFSDTGSGYLYMPGKRQIPFNTNDGMVPGKESVFDFIYSRRVRPGKVSQRD
YCYKHTNLDLTTQRQGKVSAQREVYDFPGNYFNEERGTYLANVRLERLLVLGATAEGQSSCPRMMPGHEWELSGHDYAGK
YLPVAVIHHGAQPQVLGEHAGDGGFRYDNEFIAVPAAVTVRPQIVAGRPAIVGLQTAVVTGSPGEEIHADPDGYLRVKVQ
FPWDRRGRKDGRTSCWVRVGQPWGGGGWGTQFLPRVGDEVLVTFLEGDPDRPMVIGSAYNSENQPLYALPASKTQSGIRT
RSYPNGGTDNFHELRFEDKKGSEEIYLQSEKDWNILVKNDKGQTVGRNESLTVGNNRSKTVGVDQSESVGVNKSIQVGAN
HNESIGANMTLSVGGFKNETVGINSLETIGGAKELAIGGLYQVAVGGVMNETVAGAKTEEVGLAKAVFVGNNMSENVKGD
RTTNTNGNYTETISAKYYAKADEYVIEAPKITLKAGSSSIVMDGSSITIKASKIFQN

Sequences:

>Translated_697_residues
MTIQKAAASLLSQGSTSSFQFEIPATRHLLSVAGFTVDERISHPYDIHLTLATKDNVDLDEVIDKEAVLSVDHEGGTRYF
HGVVREFTSLGTDGDYDLYHAHIVPALWFLSLEQDCRVFQFKNVQDIVAEILEESNITSDRYRFALSREDRLRKFCVQYR
ETDLNFVSRLLEEEGIFYFFEHYEDKHVIVFSDTGSGYLYMPGKRQIPFNTNDGMVPGKESVFDFIYSRRVRPGKVSQRD
YCYKHTNLDLTTQRQGKVSAQREVYDFPGNYFNEERGTYLANVRLERLLVLGATAEGQSSCPRMMPGHEWELSGHDYAGK
YLPVAVIHHGAQPQVLGEHAGDGGFRYDNEFIAVPAAVTVRPQIVAGRPAIVGLQTAVVTGSPGEEIHADPDGYLRVKVQ
FPWDRRGRKDGRTSCWVRVGQPWGGGGWGTQFLPRVGDEVLVTFLEGDPDRPMVIGSAYNSENQPLYALPASKTQSGIRT
RSYPNGGTDNFHELRFEDKKGSEEIYLQSEKDWNILVKNDKGQTVGRNESLTVGNNRSKTVGVDQSESVGVNKSIQVGAN
HNESIGANMTLSVGGFKNETVGINSLETIGGAKELAIGGLYQVAVGGVMNETVAGAKTEEVGLAKAVFVGNNMSENVKGD
RTTNTNGNYTETISAKYYAKADEYVIEAPKITLKAGSSSIVMDGSSITIKASKIFQN
>Mature_696_residues
TIQKAAASLLSQGSTSSFQFEIPATRHLLSVAGFTVDERISHPYDIHLTLATKDNVDLDEVIDKEAVLSVDHEGGTRYFH
GVVREFTSLGTDGDYDLYHAHIVPALWFLSLEQDCRVFQFKNVQDIVAEILEESNITSDRYRFALSREDRLRKFCVQYRE
TDLNFVSRLLEEEGIFYFFEHYEDKHVIVFSDTGSGYLYMPGKRQIPFNTNDGMVPGKESVFDFIYSRRVRPGKVSQRDY
CYKHTNLDLTTQRQGKVSAQREVYDFPGNYFNEERGTYLANVRLERLLVLGATAEGQSSCPRMMPGHEWELSGHDYAGKY
LPVAVIHHGAQPQVLGEHAGDGGFRYDNEFIAVPAAVTVRPQIVAGRPAIVGLQTAVVTGSPGEEIHADPDGYLRVKVQF
PWDRRGRKDGRTSCWVRVGQPWGGGGWGTQFLPRVGDEVLVTFLEGDPDRPMVIGSAYNSENQPLYALPASKTQSGIRTR
SYPNGGTDNFHELRFEDKKGSEEIYLQSEKDWNILVKNDKGQTVGRNESLTVGNNRSKTVGVDQSESVGVNKSIQVGANH
NESIGANMTLSVGGFKNETVGINSLETIGGAKELAIGGLYQVAVGGVMNETVAGAKTEEVGLAKAVFVGNNMSENVKGDR
TTNTNGNYTETISAKYYAKADEYVIEAPKITLKAGSSSIVMDGSSITIKASKIFQN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77154; Mature: 77023

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQKAAASLLSQGSTSSFQFEIPATRHLLSVAGFTVDERISHPYDIHLTLATKDNVDLD
CCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCHHHHCCCCEEEEEEEEECCCCCHH
EVIDKEAVLSVDHEGGTRYFHGVVREFTSLGTDGDYDLYHAHIVPALWFLSLEQDCRVFQ
HHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEE
FKNVQDIVAEILEESNITSDRYRFALSREDRLRKFCVQYRETDLNFVSRLLEEEGIFYFF
ECCHHHHHHHHHHHCCCCCHHEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEE
EHYEDKHVIVFSDTGSGYLYMPGKRQIPFNTNDGMVPGKESVFDFIYSRRVRPGKVSQRD
EECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
YCYKHTNLDLTTQRQGKVSAQREVYDFPGNYFNEERGTYLANVRLERLLVLGATAEGQSS
CEEEECCCEEEECCCCCCCCCHHHEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCC
CPRMMPGHEWELSGHDYAGKYLPVAVIHHGAQPQVLGEHAGDGGFRYDNEFIAVPAAVTV
CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEECCCCCCCCEEECCEEEEECEEEEE
RPQIVAGRPAIVGLQTAVVTGSPGEEIHADPDGYLRVKVQFPWDRRGRKDGRTSCWVRVG
CCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEC
QPWGGGGWGTQFLPRVGDEVLVTFLEGDPDRPMVIGSAYNSENQPLYALPASKTQSGIRT
CCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCEE
RSYPNGGTDNFHELRFEDKKGSEEIYLQSEKDWNILVKNDKGQTVGRNESLTVGNNRSKT
CCCCCCCCCCHHEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCE
VGVDQSESVGVNKSIQVGANHNESIGANMTLSVGGFKNETVGINSLETIGGAKELAIGGL
ECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCHHHHHCCH
YQVAVGGVMNETVAGAKTEEVGLAKAVFVGNNMSENVKGDRTTNTNGNYTETISAKYYAK
HHHHHCCHHHHHHCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECEEEEEC
ADEYVIEAPKITLKAGSSSIVMDGSSITIKASKIFQN
CCCEEEECCEEEEEECCCEEEECCCEEEEEECCCCCC
>Mature Secondary Structure 
TIQKAAASLLSQGSTSSFQFEIPATRHLLSVAGFTVDERISHPYDIHLTLATKDNVDLD
CHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCHHHHCCCCEEEEEEEEECCCCCHH
EVIDKEAVLSVDHEGGTRYFHGVVREFTSLGTDGDYDLYHAHIVPALWFLSLEQDCRVFQ
HHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEE
FKNVQDIVAEILEESNITSDRYRFALSREDRLRKFCVQYRETDLNFVSRLLEEEGIFYFF
ECCHHHHHHHHHHHCCCCCHHEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEE
EHYEDKHVIVFSDTGSGYLYMPGKRQIPFNTNDGMVPGKESVFDFIYSRRVRPGKVSQRD
EECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
YCYKHTNLDLTTQRQGKVSAQREVYDFPGNYFNEERGTYLANVRLERLLVLGATAEGQSS
CEEEECCCEEEECCCCCCCCCHHHEECCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCC
CPRMMPGHEWELSGHDYAGKYLPVAVIHHGAQPQVLGEHAGDGGFRYDNEFIAVPAAVTV
CCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCEECCCCCCCCEEECCEEEEECEEEEE
RPQIVAGRPAIVGLQTAVVTGSPGEEIHADPDGYLRVKVQFPWDRRGRKDGRTSCWVRVG
CCEEEECCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEC
QPWGGGGWGTQFLPRVGDEVLVTFLEGDPDRPMVIGSAYNSENQPLYALPASKTQSGIRT
CCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCEE
RSYPNGGTDNFHELRFEDKKGSEEIYLQSEKDWNILVKNDKGQTVGRNESLTVGNNRSKT
CCCCCCCCCCHHEEEECCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEEECCCCCCE
VGVDQSESVGVNKSIQVGANHNESIGANMTLSVGGFKNETVGINSLETIGGAKELAIGGL
ECCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCHHHHHCCH
YQVAVGGVMNETVAGAKTEEVGLAKAVFVGNNMSENVKGDRTTNTNGNYTETISAKYYAK
HHHHHCCHHHHHHCCCCCHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECEEEEEC
ADEYVIEAPKITLKAGSSSIVMDGSSITIKASKIFQN
CCCEEEECCEEEEEECCCEEEECCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA