| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998257
Identifier: 39998257
GI number: 39998257
Start: 3474201
End: 3476570
Strand: Direct
Name: 39998257
Synonym: GSU3167
Alternate gene names: NA
Gene position: 3474201-3476570 (Clockwise)
Preceding gene: 39998256
Following gene: 39998258
Centisome position: 91.09
GC content: 65.86
Gene sequence:
>2370_bases ATGCCCTCCGTTGATCCGTGCTGGCGCTGGTCTGCCTTCGGCAAACATCCTGCCGCAGCTGACTATTTTCGGCTCGGTGA GGATTCTCCCTTTGTCGAAGGATTGGCCGCATGGGTGGAGAACGGGTACCGGCATCTCATCAGTCGGCACGAAGCGACAA TGCCGTTCTGCTCCTGGCGCTTCTGGGCCCGCGGGTTCGGCCGGGATTCCCTTGTCCTTGGAGTGGTCCGGCTCTCCAGC GACAGCCTCGGCCGCTCCTATCCGCTGCTCATCATGGGAAGCGGCCCCCTTGAGGGATGGGAAGAGCAGTGGGACCTGCT CCCTTTTGCTTGTGAACCGTCATGGTGCCAGATCGAGTACTTGGCGACGCATTCCTTTGATGGTCTGAAGCACGTGGGTG AAGAACTCCGAAGGGTTCGCCCCCCCGGGTCGGACTGGGACGAGCTGGCGGAACGGCGCCGCGGCCTGAACCGGCTCGGT TCCCCCCTTGATCCCTATGCATCCTTCCTGGACATCCCCAGTCTCGAACGACTGGTCGCCGAACATTCCGGCCGGGAAGA GTTTTCCGTCAGACTCGACCGGGGGCCGGTGCATGACAAAATCACCCTGGTAAGCCTTTGGCACCTCCTGACCAAGAGGA CCGTCAAAGGAGTCCCCCACACCCTTTTCATGGGCGGCAACCTGGAACACTCCTTTCTCGCCTCCTTCCGGCGGGCCCTG GCCCCGGGGGATTTTCTCCACCTCTGGTCCGCGCCGGAGGCAGGAGGATGGCACGACAGCATCGGAACGGGGCACGCCTT GGACATTGCATCTATCGGAAAAGAACCGGTGTGCCCCGAACGGCCGGCCGGCGAGGATATTCGCTACGATCCCCTCTTCG ACGCGCTCCAGGCGGAGGTTGACAAGCTCACCTCCCCCGCCGTGGCCGGTGCCGTCGACTGGGAACGGGTGGTACATATG GCAGCCGACATCCTCGCCACCCGGTCCAAAGACCTCCTTGTGGCGAGCTACCTGGCAGTGGGACTCGTCCAGACCCGCGG GGGTGACGGCCTCGCTCTGGGGCTCACTGTCTGGCGCGATCTCCTGGAACGGTTCTGGTGCACCCTCTACCCCACCCGCA CACGGGGGCGCCAACGATCGGTGGAGTGGTGGCTGGATCGGACCGTGATCGCCCTGCATCATCAGGGAAACTGGTCCCTT CCCCCTGAGCAACACGGCATTGTGCTGGAAACCCTTGGCGCCATAGACCGCTTTCTGGGAGAGCGCCTGGAGGATGCCCC CTCCCTTACGAAACTGAGGCAACTACTGGCGGACATGGCGCCGGAAGGCGGAGAAGAAACGGCCCCCGAAGCCGTGGTTG CTACGCCGGCTCAAGCCGAGGCTCCCGCCACTGGCCTATTCGCTCCGCCCCGTCAAACCGCCGCCCCCGCCGTGGAGCCC CCCTGTCAGGCGATTGCCACTGGCTCCTCCCTTCAGATGCTGGAGGAAGCGCTTCGCCAGGTGGGGGAGGCGGCCGGCGC CCTCATCCAGCAGGATCCCGCGGCCCCCGTATCCTATCGGCTCTCCCGCCTTGCCGCCTGGGGGAAGGTAACCGAGCTCC CGCCGTCGATAAACGGACGTACCCGAATCCCTCCTCCCGAGCGGCAGGTGCTGACCCTTCTCCAGGAACTGGCCAGCCAC GGAGACGGCGAGGCGCTCCTGAAGGCGGCTGAGGCGCGGCTTCCCCAGTTCATCTTCTGGCTCGATCTGAGCCGGCTCAC CGCCAAGGCTCTCTGCCGCCTCGGCGACCGCTTTGCCGCCGCCCGCGAAGCGGTCTGCGCGGAGACGGCCGCCTTTGTGG GTCGGCTTCCGGCCCTTCCTGACCTGACCTTTGCCGACGGCACTCCCTTTGCCGCCCCGGAAACCCGCCAGTGGCTCACG GGGCTCGCACAGCGCGGGGCATCCGTTGCAGACTGCCCTGCGGTGGGTCATAACGACGGCCGCGCCGCGGCCATTGCCCG GGAGGTGGAAGAGGCCCAGGCTCTCATTCGGGACGGCAAACTCCTGGAGGCGGTGGAGCGGTTCCAGAAACAACTCGGCA ACGGCGCCTCCCGCAAGGAGAGGCTCCACTGGCGTCTCGCCCTGGCCCAACTCCTTGTGAACACCAATCGGGCCAAGCTG GCGCTCCCCCATCTAGAGCAGGTCGTGGCGGACATCGAGGCCTTCGGCCTCGAAGAGTACGACCCGGCCCTGGCCCTGCG GGGGCTGAAGCTCGCCTGGGCCGGCTTCGATTCCCAGATCGAGCCCCGCTTCAAGGAAAAGGCCGCCGATGCCCTCCACC GGATCGCCCGCCTCGATCCGGTGGAGATGGTGCGACTGACGAAGGGGTAG
Upstream 100 bases:
>100_bases GGCGGCGCCATGGCCGGAGCCACGGCTCCACGGATGATCGCCCGGTGCTGGTAGGGCCACACTCTCTGTGGCTGTATCGC AGGAACAAGGAGCGGAACTG
Downstream 100 bases:
>100_bases ATAACGATGGAACAGGATTGCGAATCGATTGCTTGCGGAAAAGGCTCCAAAACCAGGGCCCAAAAATCCGGAACCGGCGG GCGGATCGCCGTGACCGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 789; Mature: 788
Protein sequence:
>789_residues MPSVDPCWRWSAFGKHPAAADYFRLGEDSPFVEGLAAWVENGYRHLISRHEATMPFCSWRFWARGFGRDSLVLGVVRLSS DSLGRSYPLLIMGSGPLEGWEEQWDLLPFACEPSWCQIEYLATHSFDGLKHVGEELRRVRPPGSDWDELAERRRGLNRLG SPLDPYASFLDIPSLERLVAEHSGREEFSVRLDRGPVHDKITLVSLWHLLTKRTVKGVPHTLFMGGNLEHSFLASFRRAL APGDFLHLWSAPEAGGWHDSIGTGHALDIASIGKEPVCPERPAGEDIRYDPLFDALQAEVDKLTSPAVAGAVDWERVVHM AADILATRSKDLLVASYLAVGLVQTRGGDGLALGLTVWRDLLERFWCTLYPTRTRGRQRSVEWWLDRTVIALHHQGNWSL PPEQHGIVLETLGAIDRFLGERLEDAPSLTKLRQLLADMAPEGGEETAPEAVVATPAQAEAPATGLFAPPRQTAAPAVEP PCQAIATGSSLQMLEEALRQVGEAAGALIQQDPAAPVSYRLSRLAAWGKVTELPPSINGRTRIPPPERQVLTLLQELASH GDGEALLKAAEARLPQFIFWLDLSRLTAKALCRLGDRFAAAREAVCAETAAFVGRLPALPDLTFADGTPFAAPETRQWLT GLAQRGASVADCPAVGHNDGRAAAIAREVEEAQALIRDGKLLEAVERFQKQLGNGASRKERLHWRLALAQLLVNTNRAKL ALPHLEQVVADIEAFGLEEYDPALALRGLKLAWAGFDSQIEPRFKEKAADALHRIARLDPVEMVRLTKG
Sequences:
>Translated_789_residues MPSVDPCWRWSAFGKHPAAADYFRLGEDSPFVEGLAAWVENGYRHLISRHEATMPFCSWRFWARGFGRDSLVLGVVRLSS DSLGRSYPLLIMGSGPLEGWEEQWDLLPFACEPSWCQIEYLATHSFDGLKHVGEELRRVRPPGSDWDELAERRRGLNRLG SPLDPYASFLDIPSLERLVAEHSGREEFSVRLDRGPVHDKITLVSLWHLLTKRTVKGVPHTLFMGGNLEHSFLASFRRAL APGDFLHLWSAPEAGGWHDSIGTGHALDIASIGKEPVCPERPAGEDIRYDPLFDALQAEVDKLTSPAVAGAVDWERVVHM AADILATRSKDLLVASYLAVGLVQTRGGDGLALGLTVWRDLLERFWCTLYPTRTRGRQRSVEWWLDRTVIALHHQGNWSL PPEQHGIVLETLGAIDRFLGERLEDAPSLTKLRQLLADMAPEGGEETAPEAVVATPAQAEAPATGLFAPPRQTAAPAVEP PCQAIATGSSLQMLEEALRQVGEAAGALIQQDPAAPVSYRLSRLAAWGKVTELPPSINGRTRIPPPERQVLTLLQELASH GDGEALLKAAEARLPQFIFWLDLSRLTAKALCRLGDRFAAAREAVCAETAAFVGRLPALPDLTFADGTPFAAPETRQWLT GLAQRGASVADCPAVGHNDGRAAAIAREVEEAQALIRDGKLLEAVERFQKQLGNGASRKERLHWRLALAQLLVNTNRAKL ALPHLEQVVADIEAFGLEEYDPALALRGLKLAWAGFDSQIEPRFKEKAADALHRIARLDPVEMVRLTKG >Mature_788_residues PSVDPCWRWSAFGKHPAAADYFRLGEDSPFVEGLAAWVENGYRHLISRHEATMPFCSWRFWARGFGRDSLVLGVVRLSSD SLGRSYPLLIMGSGPLEGWEEQWDLLPFACEPSWCQIEYLATHSFDGLKHVGEELRRVRPPGSDWDELAERRRGLNRLGS PLDPYASFLDIPSLERLVAEHSGREEFSVRLDRGPVHDKITLVSLWHLLTKRTVKGVPHTLFMGGNLEHSFLASFRRALA PGDFLHLWSAPEAGGWHDSIGTGHALDIASIGKEPVCPERPAGEDIRYDPLFDALQAEVDKLTSPAVAGAVDWERVVHMA ADILATRSKDLLVASYLAVGLVQTRGGDGLALGLTVWRDLLERFWCTLYPTRTRGRQRSVEWWLDRTVIALHHQGNWSLP PEQHGIVLETLGAIDRFLGERLEDAPSLTKLRQLLADMAPEGGEETAPEAVVATPAQAEAPATGLFAPPRQTAAPAVEPP CQAIATGSSLQMLEEALRQVGEAAGALIQQDPAAPVSYRLSRLAAWGKVTELPPSINGRTRIPPPERQVLTLLQELASHG DGEALLKAAEARLPQFIFWLDLSRLTAKALCRLGDRFAAAREAVCAETAAFVGRLPALPDLTFADGTPFAAPETRQWLTG LAQRGASVADCPAVGHNDGRAAAIAREVEEAQALIRDGKLLEAVERFQKQLGNGASRKERLHWRLALAQLLVNTNRAKLA LPHLEQVVADIEAFGLEEYDPALALRGLKLAWAGFDSQIEPRFKEKAADALHRIARLDPVEMVRLTKG
Specific function: Unknown
COG id: COG3515
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86809; Mature: 86678
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVDPCWRWSAFGKHPAAADYFRLGEDSPFVEGLAAWVENGYRHLISRHEATMPFCSWR CCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FWARGFGRDSLVLGVVRLSSDSLGRSYPLLIMGSGPLEGWEEQWDLLPFACEPSWCQIEY HHHHCCCCCHHEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHCCCCEECCCCCEEEEE LATHSFDGLKHVGEELRRVRPPGSDWDELAERRRGLNRLGSPLDPYASFLDIPSLERLVA EECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHH EHSGREEFSVRLDRGPVHDKITLVSLWHLLTKRTVKGVPHTLFMGGNLEHSFLASFRRAL HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH APGDFLHLWSAPEAGGWHDSIGTGHALDIASIGKEPVCPERPAGEDIRYDPLFDALQAEV CCCCEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DKLTSPAVAGAVDWERVVHMAADILATRSKDLLVASYLAVGLVQTRGGDGLALGLTVWRD HHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH LLERFWCTLYPTRTRGRQRSVEWWLDRTVIALHHQGNWSLPPEQHGIVLETLGAIDRFLG HHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH ERLEDAPSLTKLRQLLADMAPEGGEETAPEAVVATPAQAEAPATGLFAPPRQTAAPAVEP HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC PCQAIATGSSLQMLEEALRQVGEAAGALIQQDPAAPVSYRLSRLAAWGKVTELPPSINGR CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC TRIPPPERQVLTLLQELASHGDGEALLKAAEARLPQFIFWLDLSRLTAKALCRLGDRFAA CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AREAVCAETAAFVGRLPALPDLTFADGTPFAAPETRQWLTGLAQRGASVADCPAVGHNDG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC RAAAIAREVEEAQALIRDGKLLEAVERFQKQLGNGASRKERLHWRLALAQLLVNTNRAKL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEE ALPHLEQVVADIEAFGLEEYDPALALRGLKLAWAGFDSQIEPRFKEKAADALHRIARLDP EHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH VEMVRLTKG HHHHHCCCC >Mature Secondary Structure PSVDPCWRWSAFGKHPAAADYFRLGEDSPFVEGLAAWVENGYRHLISRHEATMPFCSWR CCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FWARGFGRDSLVLGVVRLSSDSLGRSYPLLIMGSGPLEGWEEQWDLLPFACEPSWCQIEY HHHHCCCCCHHEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHCCCCEECCCCCEEEEE LATHSFDGLKHVGEELRRVRPPGSDWDELAERRRGLNRLGSPLDPYASFLDIPSLERLVA EECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHH EHSGREEFSVRLDRGPVHDKITLVSLWHLLTKRTVKGVPHTLFMGGNLEHSFLASFRRAL HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHH APGDFLHLWSAPEAGGWHDSIGTGHALDIASIGKEPVCPERPAGEDIRYDPLFDALQAEV CCCCEEEEECCCCCCCCCCCCCCCCCEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH DKLTSPAVAGAVDWERVVHMAADILATRSKDLLVASYLAVGLVQTRGGDGLALGLTVWRD HHHCCCHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH LLERFWCTLYPTRTRGRQRSVEWWLDRTVIALHHQGNWSLPPEQHGIVLETLGAIDRFLG HHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH ERLEDAPSLTKLRQLLADMAPEGGEETAPEAVVATPAQAEAPATGLFAPPRQTAAPAVEP HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC PCQAIATGSSLQMLEEALRQVGEAAGALIQQDPAAPVSYRLSRLAAWGKVTELPPSINGR CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC TRIPPPERQVLTLLQELASHGDGEALLKAAEARLPQFIFWLDLSRLTAKALCRLGDRFAA CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AREAVCAETAAFVGRLPALPDLTFADGTPFAAPETRQWLTGLAQRGASVADCPAVGHNDG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC RAAAIAREVEEAQALIRDGKLLEAVERFQKQLGNGASRKERLHWRLALAQLLVNTNRAKL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEE ALPHLEQVVADIEAFGLEEYDPALALRGLKLAWAGFDSQIEPRFKEKAADALHRIARLDP EHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCH VEMVRLTKG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA