| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is hisB [H]
Identifier: 39998188
GI number: 39998188
Start: 3401904
End: 3402491
Strand: Reverse
Name: hisB [H]
Synonym: GSU3098
Alternate gene names: 39998188
Gene position: 3402491-3401904 (Counterclockwise)
Preceding gene: 39998189
Following gene: 39998187
Centisome position: 89.21
GC content: 59.69
Gene sequence:
>588_bases ATGTCCCGGAAAGCCACCATTGAGCGCGTCACCAAGGAAACCCAGATCAAGCTCTCCCTTGAAATAGACGGGACGGGCGA GGCGAAGATCTGTACCTCCGTGCCGTTTCTCGACCATATGCTCGACCTCTTTGCCCGCCACGGGCTCTTCAATCTTCAGG TGGACGCCACGGGGGACATCGATATCGATTTTCACCACACGGTGGAGGACATCGGCATCGTCCTCGGCCAGGCGCTCAAG GAGGCCTTGGGCGACAAGAAGGGGATCAGGCGCTACGGCCAAGCCACAGTCCCCATGGACGAAACCCTTGCCAGCGTGGC GGTGGACATCTCGGGGCGCCCCTACCTCGTCTACCACGTCTCTCTGCCCAAGGTGAAGATCGGCGAGTTTGACGTGGAAC TGGTGCGGGAATTTTTTCAGGCCGTGGTAAACAACCTGGGCGCCAACATCCATGTGAACGTCATGTACGGCGACAATGTC CATCACATCGTCGAGGCGTGCTTCAAGGCGTTTGCCCGGGCCGTGGACCAGGCAACCCAGGTGGACTCCCGGATTCAGGG GGTCATGTCGACGAAGGGCAAGCTCTGA
Upstream 100 bases:
>100_bases CATGGCATGAGGATTTCCATCGGCACGCGGGAGGAGATGGAGGCGACTCTCGCCGCCCTGAAAGAGATTGGCTAACTTCG ATTCCCACGAGGAGGGTTCC
Downstream 100 bases:
>100_bases TATGACCAAGATTGCAATTATCGACTACGGCATGGGGAATCTCCGGTCGGTCCAGAAGGGGTTCGAGAAGGTGGGCTTCG AGGCGGTTGTGACTGCCGAC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSRKATIERVTKETQIKLSLEIDGTGEAKICTSVPFLDHMLDLFARHGLFNLQVDATGDIDIDFHHTVEDIGIVLGQALK EALGDKKGIRRYGQATVPMDETLASVAVDISGRPYLVYHVSLPKVKIGEFDVELVREFFQAVVNNLGANIHVNVMYGDNV HHIVEACFKAFARAVDQATQVDSRIQGVMSTKGKL
Sequences:
>Translated_195_residues MSRKATIERVTKETQIKLSLEIDGTGEAKICTSVPFLDHMLDLFARHGLFNLQVDATGDIDIDFHHTVEDIGIVLGQALK EALGDKKGIRRYGQATVPMDETLASVAVDISGRPYLVYHVSLPKVKIGEFDVELVREFFQAVVNNLGANIHVNVMYGDNV HHIVEACFKAFARAVDQATQVDSRIQGVMSTKGKL >Mature_194_residues SRKATIERVTKETQIKLSLEIDGTGEAKICTSVPFLDHMLDLFARHGLFNLQVDATGDIDIDFHHTVEDIGIVLGQALKE ALGDKKGIRRYGQATVPMDETLASVAVDISGRPYLVYHVSLPKVKIGEFDVELVREFFQAVVNNLGANIHVNVMYGDNVH HIVEACFKAFARAVDQATQVDSRIQGVMSTKGKL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=193, Percent_Identity=46.1139896373057, Blast_Score=167, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6324776, Length=217, Percent_Identity=35.9447004608295, Blast_Score=145, Evalue=4e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21521; Mature: 21390
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKATIERVTKETQIKLSLEIDGTGEAKICTSVPFLDHMLDLFARHGLFNLQVDATGDI CCCCHHHHHHCCCEEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCEEEEEEECCCCE DIDFHHTVEDIGIVLGQALKEALGDKKGIRRYGQATVPMDETLASVAVDISGRPYLVYHV EECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHEEECCCCEEEEEEE SLPKVKIGEFDVELVREFFQAVVNNLGANIHVNVMYGDNVHHIVEACFKAFARAVDQATQ ECCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDSRIQGVMSTKGKL HHHHHHHHHHCCCCC >Mature Secondary Structure SRKATIERVTKETQIKLSLEIDGTGEAKICTSVPFLDHMLDLFARHGLFNLQVDATGDI CCCHHHHHHCCCEEEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCEEEEEEECCCCE DIDFHHTVEDIGIVLGQALKEALGDKKGIRRYGQATVPMDETLASVAVDISGRPYLVYHV EECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHEEECCCCEEEEEEE SLPKVKIGEFDVELVREFFQAVVNNLGANIHVNVMYGDNVHHIVEACFKAFARAVDQATQ ECCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDSRIQGVMSTKGKL HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA