| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is yqeY [H]
Identifier: 39998182
GI number: 39998182
Start: 3398549
End: 3398989
Strand: Reverse
Name: yqeY [H]
Synonym: GSU3092
Alternate gene names: 39998182
Gene position: 3398989-3398549 (Counterclockwise)
Preceding gene: 39998183
Following gene: 39998181
Centisome position: 89.12
GC content: 61.45
Gene sequence:
>441_bases ATGTTGAGGGATCGCCTGAACGAGGAGATGAAAGCGGCCATGAAGGCCAGGGATGAGGTGCGACTTTCCGCCATCCGCCT CGTTCGCTCTTCGGTGAAGAACCGTGAGATCGAGGCGCGGCGTGAACTCTCCGAACAGGAAGTGACGGAAGTCGTTTCAT CCCTCGTCAAACAACGCCGGGAATCGATCCGGATGTTCGGCGAGGCCGGACGTACCGACCTCGTGGAAAAAGAAGAGCGG GAGCTTCAGGTTCTGCTCGGCTTTCTCCCCCAACAGCTCACCAGGGAGGAGATCGGGGGGCTGGTGGCCTCGGCCATTGC GGAGACCGGTGCCCAGGGCGTCAAAGACATGGGGCGGGTGATGAAGGCCCTCATGCCCCACGTGGCCGGCAGGGCTGACG GATCGCTGGTTAGTGCCATCGTGAAGGAACAGCTTGCCTAG
Upstream 100 bases:
>100_bases GCCCGCGTGGCATGGAACGGTGTTGCGGACGCCTCCGCTTGGGGGGCGTCCGTTTGCCGCTTTCAGCGCTGGATATGGAC TTGCGGGCCGGGGAGTTGCC
Downstream 100 bases:
>100_bases ACGAACGTTTTCCGGTCTCTGAGTTCCGCGATCAGACCCTGGGGGCGATTCTCTGAATTGCCCCTTCTTCTTTTGATTCC AACAAGGTGCATGGCATGGG
Product: YqeY family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLRDRLNEEMKAAMKARDEVRLSAIRLVRSSVKNREIEARRELSEQEVTEVVSSLVKQRRESIRMFGEAGRTDLVEKEER ELQVLLGFLPQQLTREEIGGLVASAIAETGAQGVKDMGRVMKALMPHVAGRADGSLVSAIVKEQLA
Sequences:
>Translated_146_residues MLRDRLNEEMKAAMKARDEVRLSAIRLVRSSVKNREIEARRELSEQEVTEVVSSLVKQRRESIRMFGEAGRTDLVEKEER ELQVLLGFLPQQLTREEIGGLVASAIAETGAQGVKDMGRVMKALMPHVAGRADGSLVSAIVKEQLA >Mature_146_residues MLRDRLNEEMKAAMKARDEVRLSAIRLVRSSVKNREIEARRELSEQEVTEVVSSLVKQRRESIRMFGEAGRTDLVEKEER ELQVLLGFLPQQLTREEIGGLVASAIAETGAQGVKDMGRVMKALMPHVAGRADGSLVSAIVKEQLA
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16285; Mature: 16285
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDRLNEEMKAAMKARDEVRLSAIRLVRSSVKNREIEARRELSEQEVTEVVSSLVKQRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESIRMFGEAGRTDLVEKEERELQVLLGFLPQQLTREEIGGLVASAIAETGAQGVKDMGRV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKALMPHVAGRADGSLVSAIVKEQLA HHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLRDRLNEEMKAAMKARDEVRLSAIRLVRSSVKNREIEARRELSEQEVTEVVSSLVKQRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESIRMFGEAGRTDLVEKEERELQVLLGFLPQQLTREEIGGLVASAIAETGAQGVKDMGRV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKALMPHVAGRADGSLVSAIVKEQLA HHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]