| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39998121
Identifier: 39998121
GI number: 39998121
Start: 3336366
End: 3337343
Strand: Reverse
Name: 39998121
Synonym: GSU3030
Alternate gene names: NA
Gene position: 3337343-3336366 (Counterclockwise)
Preceding gene: 39998123
Following gene: 39998120
Centisome position: 87.5
GC content: 65.13
Gene sequence:
>978_bases ATGAGCGTCATAGACATTCATTGTCACACCGCAGGGGTCGGAGCCGGCGGCAGCGGCTGCTTCATTTCGACCCGTCTGAG GGAAAGCTGGAGGTACCGGTTCTATCTGGCATCCTTCGGAGTCACCGATGCGGAGCTCGAACGGGAAGGGGACGGCCTGG TCCTGCGCCGCCTTGCGGAACGGTTGGCAGTCTCGACCCGGGTCCAGGCCGCCGTGGTGCTGGCACTGGACGGTGCCATC GACTCCCGGGGAAACCTGGACCAGACCCGGACCGAATTGTTCATTCCCAATGACTTTCTCTCCGGCCAGTGTCGCAGGTA TCCCAACCTCCTGTTCGGCGCCAGCGTCAACCCCCTGCGGCCCGACGCCCTGGACCGGCTCGATGCCGCGGCTGCCGCCA GCGCGGTGCTGGTCAAGTGGCTGCCCTCGATCCAGGGAACCGATCCGGCGGACCGGCGGCTGGTTCCCTTTTACCGGCGC CTTGCGGAACTCGGGTTGCCGCTGCTCACCCACACCGGCGAGGAGCAATCATTCACCCGGGCTGACAACAGTCTGTCAGA TCCGAACCGCCTCCGCCTGCCCCTCGATGAAGGGGTTACGGTCATTGCCGCCCACTGTGCCACCAGCGGCAGGAGCGAGG GCCAACGGAACCGGCACCGGCTTCTGGCCCTGTTTGCAGCCTATCCCAACCTCCATGCCGATATCTCATCCCTTACCCAG GTTAACCGCCTGGGGCACCTTCAATGGGTCCTGAAGCACCGGGAACTCCACGAGCGGCTCCTGTACGGCACCGATATGCC CTTGCCCGCCACGGCGCTCACCTCGCCCTGGTTTCACCTCTTCTCTCTCGGTCCGTTCGCAGCCAGGCGCCTGGCTGCCA TCCGCAACCCCTGGGACCGGGACGTGGCCCTGAAGCTGGCATTAGGGATGCCCGAGCAGATTCTACACAACGCGGCCGGT CTCTTGCGACTCGCCTGA
Upstream 100 bases:
>100_bases AGCTAACCTCTTGACAGGATGATAGAATCTAGTGCATGGGGGGCTTGGCACATTCCCGGCAAAGGAGGAGGGAATCCAAC ATCCATTCTCCGGGGGATCC
Downstream 100 bases:
>100_bases CGACACCGAGGTTACCATGAACTCCACAGACACCGGAACTGACACACTCCCTTCATCGTTCAAACGCCTCAATCTTGCTC AGGCCCTTGGGGCGCTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Superfamily Protein; Amidohydrolase
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSVIDIHCHTAGVGAGGSGCFISTRLRESWRYRFYLASFGVTDAELEREGDGLVLRRLAERLAVSTRVQAAVVLALDGAI DSRGNLDQTRTELFIPNDFLSGQCRRYPNLLFGASVNPLRPDALDRLDAAAAASAVLVKWLPSIQGTDPADRRLVPFYRR LAELGLPLLTHTGEEQSFTRADNSLSDPNRLRLPLDEGVTVIAAHCATSGRSEGQRNRHRLLALFAAYPNLHADISSLTQ VNRLGHLQWVLKHRELHERLLYGTDMPLPATALTSPWFHLFSLGPFAARRLAAIRNPWDRDVALKLALGMPEQILHNAAG LLRLA
Sequences:
>Translated_325_residues MSVIDIHCHTAGVGAGGSGCFISTRLRESWRYRFYLASFGVTDAELEREGDGLVLRRLAERLAVSTRVQAAVVLALDGAI DSRGNLDQTRTELFIPNDFLSGQCRRYPNLLFGASVNPLRPDALDRLDAAAAASAVLVKWLPSIQGTDPADRRLVPFYRR LAELGLPLLTHTGEEQSFTRADNSLSDPNRLRLPLDEGVTVIAAHCATSGRSEGQRNRHRLLALFAAYPNLHADISSLTQ VNRLGHLQWVLKHRELHERLLYGTDMPLPATALTSPWFHLFSLGPFAARRLAAIRNPWDRDVALKLALGMPEQILHNAAG LLRLA >Mature_324_residues SVIDIHCHTAGVGAGGSGCFISTRLRESWRYRFYLASFGVTDAELEREGDGLVLRRLAERLAVSTRVQAAVVLALDGAID SRGNLDQTRTELFIPNDFLSGQCRRYPNLLFGASVNPLRPDALDRLDAAAAASAVLVKWLPSIQGTDPADRRLVPFYRRL AELGLPLLTHTGEEQSFTRADNSLSDPNRLRLPLDEGVTVIAAHCATSGRSEGQRNRHRLLALFAAYPNLHADISSLTQV NRLGHLQWVLKHRELHERLLYGTDMPLPATALTSPWFHLFSLGPFAARRLAAIRNPWDRDVALKLALGMPEQILHNAAGL LRLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35903; Mature: 35771
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIDIHCHTAGVGAGGSGCFISTRLRESWRYRFYLASFGVTDAELEREGDGLVLRRLAE CCEEEEEEEECCCCCCCCCCEEEHHHHHCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHH RLAVSTRVQAAVVLALDGAIDSRGNLDQTRTELFIPNDFLSGQCRRYPNLLFGASVNPLR HHHHHHHHHEEEEEEECCCCCCCCCCCCCHHEEECCCHHHCCHHHHCCCEEECCCCCCCC PDALDRLDAAAAASAVLVKWLPSIQGTDPADRRLVPFYRRLAELGLPLLTHTGEEQSFTR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHH ADNSLSDPNRLRLPLDEGVTVIAAHCATSGRSEGQRNRHRLLALFAAYPNLHADISSLTQ CCCCCCCCCEEECCHHCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH VNRLGHLQWVLKHRELHERLLYGTDMPLPATALTSPWFHLFSLGPFAARRLAAIRNPWDR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCC DVALKLALGMPEQILHNAAGLLRLA CCEEEEECCCCHHHHHHHHHHEECC >Mature Secondary Structure SVIDIHCHTAGVGAGGSGCFISTRLRESWRYRFYLASFGVTDAELEREGDGLVLRRLAE CEEEEEEEECCCCCCCCCCEEEHHHHHCCEEEEEEEECCCCHHHHHCCCCCHHHHHHHH RLAVSTRVQAAVVLALDGAIDSRGNLDQTRTELFIPNDFLSGQCRRYPNLLFGASVNPLR HHHHHHHHHEEEEEEECCCCCCCCCCCCCHHEEECCCHHHCCHHHHCCCEEECCCCCCCC PDALDRLDAAAAASAVLVKWLPSIQGTDPADRRLVPFYRRLAELGLPLLTHTGEEQSFTR CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHH ADNSLSDPNRLRLPLDEGVTVIAAHCATSGRSEGQRNRHRLLALFAAYPNLHADISSLTQ CCCCCCCCCEEECCHHCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH VNRLGHLQWVLKHRELHERLLYGTDMPLPATALTSPWFHLFSLGPFAARRLAAIRNPWDR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHCCHHHHHHHHHHCCCCCC DVALKLALGMPEQILHNAAGLLRLA CCEEEEECCCCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA