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The map label for this gene is opsX [H]

Identifier: 39998116

GI number: 39998116

Start: 3329371

End: 3330924

Strand: Direct

Name: opsX [H]

Synonym: GSU3025

Alternate gene names: 39998116

Gene position: 3329371-3330924 (Clockwise)

Preceding gene: 39998115

Following gene: 39998117

Centisome position: 87.29

GC content: 66.09

Gene sequence:

>1554_bases
ATGAAAGAGATCGCCCTTCTCGCCATAGCCCGATACGGGGACCTGATCCAGACGACGCCGCTGGTGCGGGCGTTGCGCCG
CGCCCACCCCGGCGCCCGGATCACCGCCATCGTGGAGGACCGCTTTTGCGGCATCCTGCCGCTGCTCCCCGGCATCGACC
GAACCATCGTCCTCAACAAGCAGGACATCGCCTGGGACATCGCCACCGGCGATTCTCCCCTGGTGCCCTACCTCAAGATG
GATGAGTTCGTCCGGAAGCTGGAGGAGGGGAGCTACGACCTGCTGGTCAACATCACCTGTTCGCGCCTCTCCGCCTTTTT
CGCCTCCTGCGTCACGAGCCGCCGCCGCACCGGCATCTCGGCCGACGAGGCCGGGGAGCGGAACATCGTGACCCTCTGGG
GGCAGTACATCTTCAGCTGGTTCAACGACAACATCCGCAAGTATAACGCCATCAACCTGGTGGATATCTTCACCCGGCTG
GGCGAGGTCCCTCCAGACGGGCGCCGGGTAGAACTGGTCGCCACGGAGAAGGGGGAGCGATTCGCCGACGACTTCCTGGA
CCGCCATGGGCTCAGGGGGCAGCGCCTCGTGGGACTGCAGCTGGGGGCCAGCGAGGCGACCCGGATCTGGCCTGCCGAGC
ACTTCGCCCGCATCTCGGATCGGCTCCAGCGGGAACTGGGGGTACGGACCATCCTCTTCGGGGCTCCCGTGGAAAAGCAC
CTGGCCGGGCAGGCTATGGCCGCCATGGAAATGCCGGCCGTGGACGCGGTGGGCGAAACCGGGATCGAAGAACTCTACTC
CCTGGTGGGGCGCTGCGCGGCCCTGGTATCCAACGACACCGGCACCATGCACTTCGCCGCCGCGGCCGGCGTGCCCGCGG
TCATGCTCTGCATTGGCCCGGCTTTTTTCCGCTGCACCGGCCCCTATGGCGAAGGGCACCTGGCGCTCCAGCCCGACCTG
CCCTGCTCGCCCTGCCCCTACAGCCTGGTCTGCGCCGATCCGGTCTGCCGCGACACCATTTCTCCCGAGGCGGTCTTCTC
GGCTTGCCGCATGATCCTGGCCGGCGCTGATGGGTTGGGGAATGCCGATTTTTCCGGCGTGAGGGTCTATCGGAGTTCAT
TTGCTCCCGACGGATACCTGACATGGGATGGCCTGTTCAATGTGGACGCCTGGGAAGAAGAGCAGGTCAAGCGGCGCGAA
TCCGCCTGGAAGGGATGTTTCGACGGAAGCACGAAGGGGTGCGGTGCTCCCGGCGACGAGACCTTGCGGGCCTTCTGGGA
GCTCACGGGGCGGGGGATTGAAGCAACAGAGGCCATCATCCGGGCGGCTCGGAAAAAGCCCCTGCCCGTGGACGAGATCC
GGCGCCTCGGCGAGAAGGAGTCGGCCATCGAGGCGGAGGTGAAGCTCATGGGCTATCGTCACGAACCTCTGGCCCCGGTC
ACCGAATTCCTGACGCTCATGCGTGAAAACATCACCGGCGAGGAGCTGGGGCGGATCGCGCGGGAGACGCGTTCCCTTTA
CGAGACCGGGCGCTGCCTGGCGGCACTGCTGTAG

Upstream 100 bases:

>100_bases
TGCTCGGCACCATCGTGACCGGCCAGGGGAAACTCTCCCGGGCCGAAAAGCTGTTCCTCATGCTCCAGAACGTCGAGGTC
CTCTGGGAGAAAATTCCGGA

Downstream 100 bases:

>100_bases
CTAAAGTTTTCCGGTCCGCGGCCGAAACGATATCATAGCGGACCATTTTCTGAAGAGGAACTCCAATGATCAGACTGACA
CGTCTCGACGGCGATGTTTT

Product: heptosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKEIALLAIARYGDLIQTTPLVRALRRAHPGARITAIVEDRFCGILPLLPGIDRTIVLNKQDIAWDIATGDSPLVPYLKM
DEFVRKLEEGSYDLLVNITCSRLSAFFASCVTSRRRTGISADEAGERNIVTLWGQYIFSWFNDNIRKYNAINLVDIFTRL
GEVPPDGRRVELVATEKGERFADDFLDRHGLRGQRLVGLQLGASEATRIWPAEHFARISDRLQRELGVRTILFGAPVEKH
LAGQAMAAMEMPAVDAVGETGIEELYSLVGRCAALVSNDTGTMHFAAAAGVPAVMLCIGPAFFRCTGPYGEGHLALQPDL
PCSPCPYSLVCADPVCRDTISPEAVFSACRMILAGADGLGNADFSGVRVYRSSFAPDGYLTWDGLFNVDAWEEEQVKRRE
SAWKGCFDGSTKGCGAPGDETLRAFWELTGRGIEATEAIIRAARKKPLPVDEIRRLGEKESAIEAEVKLMGYRHEPLAPV
TEFLTLMRENITGEELGRIARETRSLYETGRCLAALL

Sequences:

>Translated_517_residues
MKEIALLAIARYGDLIQTTPLVRALRRAHPGARITAIVEDRFCGILPLLPGIDRTIVLNKQDIAWDIATGDSPLVPYLKM
DEFVRKLEEGSYDLLVNITCSRLSAFFASCVTSRRRTGISADEAGERNIVTLWGQYIFSWFNDNIRKYNAINLVDIFTRL
GEVPPDGRRVELVATEKGERFADDFLDRHGLRGQRLVGLQLGASEATRIWPAEHFARISDRLQRELGVRTILFGAPVEKH
LAGQAMAAMEMPAVDAVGETGIEELYSLVGRCAALVSNDTGTMHFAAAAGVPAVMLCIGPAFFRCTGPYGEGHLALQPDL
PCSPCPYSLVCADPVCRDTISPEAVFSACRMILAGADGLGNADFSGVRVYRSSFAPDGYLTWDGLFNVDAWEEEQVKRRE
SAWKGCFDGSTKGCGAPGDETLRAFWELTGRGIEATEAIIRAARKKPLPVDEIRRLGEKESAIEAEVKLMGYRHEPLAPV
TEFLTLMRENITGEELGRIARETRSLYETGRCLAALL
>Mature_517_residues
MKEIALLAIARYGDLIQTTPLVRALRRAHPGARITAIVEDRFCGILPLLPGIDRTIVLNKQDIAWDIATGDSPLVPYLKM
DEFVRKLEEGSYDLLVNITCSRLSAFFASCVTSRRRTGISADEAGERNIVTLWGQYIFSWFNDNIRKYNAINLVDIFTRL
GEVPPDGRRVELVATEKGERFADDFLDRHGLRGQRLVGLQLGASEATRIWPAEHFARISDRLQRELGVRTILFGAPVEKH
LAGQAMAAMEMPAVDAVGETGIEELYSLVGRCAALVSNDTGTMHFAAAAGVPAVMLCIGPAFFRCTGPYGEGHLALQPDL
PCSPCPYSLVCADPVCRDTISPEAVFSACRMILAGADGLGNADFSGVRVYRSSFAPDGYLTWDGLFNVDAWEEEQVKRRE
SAWKGCFDGSTKGCGAPGDETLRAFWELTGRGIEATEAIIRAARKKPLPVDEIRRLGEKESAIEAEVKLMGYRHEPLAPV
TEFLTLMRENITGEELGRIARETRSLYETGRCLAALL

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 56905; Mature: 56905

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIALLAIARYGDLIQTTPLVRALRRAHPGARITAIVEDRFCGILPLLPGIDRTIVLNK
CCCHHEEHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCEEEECC
QDIAWDIATGDSPLVPYLKMDEFVRKLEEGSYDLLVNITCSRLSAFFASCVTSRRRTGIS
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCC
ADEAGERNIVTLWGQYIFSWFNDNIRKYNAINLVDIFTRLGEVPPDGRRVELVATEKGER
CCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCH
FADDFLDRHGLRGQRLVGLQLGASEATRIWPAEHFARISDRLQRELGVRTILFGAPVEKH
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
LAGQAMAAMEMPAVDAVGETGIEELYSLVGRCAALVSNDTGTMHFAAAAGVPAVMLCIGP
HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCHHHHHHHCC
AFFRCTGPYGEGHLALQPDLPCSPCPYSLVCADPVCRDTISPEAVFSACRMILAGADGLG
HHHEECCCCCCCEEEECCCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCC
NADFSGVRVYRSSFAPDGYLTWDGLFNVDAWEEEQVKRRESAWKGCFDGSTKGCGAPGDE
CCCCCHHHHHHHCCCCCCEEEECCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH
TLRAFWELTGRGIEATEAIIRAARKKPLPVDEIRRLGEKESAIEAEVKLMGYRHEPLAPV
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH
TEFLTLMRENITGEELGRIARETRSLYETGRCLAALL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEIALLAIARYGDLIQTTPLVRALRRAHPGARITAIVEDRFCGILPLLPGIDRTIVLNK
CCCHHEEHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCCCCEEEECC
QDIAWDIATGDSPLVPYLKMDEFVRKLEEGSYDLLVNITCSRLSAFFASCVTSRRRTGIS
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCC
ADEAGERNIVTLWGQYIFSWFNDNIRKYNAINLVDIFTRLGEVPPDGRRVELVATEKGER
CCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCH
FADDFLDRHGLRGQRLVGLQLGASEATRIWPAEHFARISDRLQRELGVRTILFGAPVEKH
HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCHHHH
LAGQAMAAMEMPAVDAVGETGIEELYSLVGRCAALVSNDTGTMHFAAAAGVPAVMLCIGP
HHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCHHHHHHHCC
AFFRCTGPYGEGHLALQPDLPCSPCPYSLVCADPVCRDTISPEAVFSACRMILAGADGLG
HHHEECCCCCCCEEEECCCCCCCCCCCCEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCC
NADFSGVRVYRSSFAPDGYLTWDGLFNVDAWEEEQVKRRESAWKGCFDGSTKGCGAPGDE
CCCCCHHHHHHHCCCCCCEEEECCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH
TLRAFWELTGRGIEATEAIIRAARKKPLPVDEIRRLGEKESAIEAEVKLMGYRHEPLAPV
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH
TEFLTLMRENITGEELGRIARETRSLYETGRCLAALL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]