| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39998108
Identifier: 39998108
GI number: 39998108
Start: 3311632
End: 3311826
Strand: Direct
Name: 39998108
Synonym: GSU3017
Alternate gene names: NA
Gene position: 3311632-3311826 (Clockwise)
Preceding gene: 39998105
Following gene: 39998109
Centisome position: 86.83
GC content: 55.38
Gene sequence:
>195_bases ATGACCAATAATTTTGCCCTTATCGGCGCAGGTGGCTACATCGCACCCCGTCATCTCCAAGCAATCAGGGACACCGGCAA CCGGCTCGTGGCGGCTCTCGAAAAGAGCGAATCTGTGAGAATTCTCGACCGACACTTCGACAATGTCTCGTTTTTCGTCG AGTTCGAGCGGTTCGATCTCCACGCGGTCGCCTGA
Upstream 100 bases:
>100_bases TGCAACTTACATCACACCAAGCCGTCGGCACGTAGGTTGCAGTCACTATTCCTGACAATATATCCTTGGACTAATAGTCC ACAACCCCGGAGAACCGACC
Downstream 100 bases:
>100_bases CATCATTAGCGCGAAAACGAAAACTCCTTAAGTTTGCATGGAGGATATGTTCATGGGTACATCAGGTATGCAATGCGAAA AGAAATTCCTGGATAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase; Oxidoreductase Domain Protein; MviM Protein; Lipopolysaccharide Biosynthesis Protein WbpB; Oxidoreductase-Like; Oxidoreductase Gfo/Idh/MocA Family; Gfo/Idh/MocA Family Oxidoreductase; Oxidoreductase Family Protein; Uracil-DNA Glycosylase Superfamily Protein; Lipopolysaccharide Biosynthesis Protein; Regulatory Protein LacI
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MTNNFALIGAGGYIAPRHLQAIRDTGNRLVAALEKSESVRILDRHFDNVSFFVEFERFDLHAVA
Sequences:
>Translated_64_residues MTNNFALIGAGGYIAPRHLQAIRDTGNRLVAALEKSESVRILDRHFDNVSFFVEFERFDLHAVA >Mature_63_residues TNNFALIGAGGYIAPRHLQAIRDTGNRLVAALEKSESVRILDRHFDNVSFFVEFERFDLHAVA
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7218; Mature: 7087
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNNFALIGAGGYIAPRHLQAIRDTGNRLVAALEKSESVRILDRHFDNVSFFVEFERFDL CCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEECEEE HAVA EEEC >Mature Secondary Structure TNNFALIGAGGYIAPRHLQAIRDTGNRLVAALEKSESVRILDRHFDNVSFFVEFERFDL CCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCEEEEEEEECEEE HAVA EEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA