| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is engB
Identifier: 39998104
GI number: 39998104
Start: 3303260
End: 3303880
Strand: Reverse
Name: engB
Synonym: GSU3013
Alternate gene names: 39998104
Gene position: 3303880-3303260 (Counterclockwise)
Preceding gene: 39998106
Following gene: 39998102
Centisome position: 86.62
GC content: 62.8
Gene sequence:
>621_bases ATGGTGAATATCACGAGCGCGGAATTTGTTACGAGCGGTACGAGACCCGAGCACTATCCGCCCGGCGATCTGCTCGAGAT CGCTTTTGTGGGGCGATCCAATGTCGGAAAATCGTCACTTATCAACGTGCTTGTTAATCGCAAGAGCCTGGTCCGGACCA GTTCGACGCCGGGACGTACCCAGCTCATCAACTTTTTCAGGGTGAACGGCAGCCTGATGCTGGTGGACCTTCCGGGCTAC GGGTTCGCCCGTGTCCCGCCTGAGGTGAAGAGGCAGTGGGGCCCCATGGTCGAAACCTATCTGGCGGGCCGCTCCTGTCT CGCCTGCGTGGTGCTGATCGTGGATGTCCGCCGGACGCCGGCTGAAGAGGACCGGCTCATGCTCCAGTGGCTGCGGGCCT ACGACATCCCCGTCCTGGTGGTCATCACCAAGTGCGACAAGGTCTCGAAGAACGAGCGGGCCAAGCAGGCGAGCCTGATC AGCCGGACCCTCGGCCTGGCTCCGGACGAGATGGCTTTCTTCTCGGCCCTTTCCCGCGAGGGGCGTGACGCCATCTGGGC GCGGATCGAGGCGATCATGGCCGAAGGACACTCCCCGTCAGTGGATGGCGCCCCGGAGTGA
Upstream 100 bases:
>100_bases CTCGCCGAAAGCGTGGTGTGCAGCCGGTCGCTTCCTCCGATTGCATTGGGGGAACCGAGGTGCTATTGTCGCACGGGCAG TTACTGTTTCAGGGGGGTCC
Downstream 100 bases:
>100_bases CCGGCCGTCATGGGCGTTGACTTTTACTGCCCGCTCTGCTACAAGTCTTTGAACAATCGAATATTTCAAGCGTTCAGGTG CTTCCACTCCCACGGTGGAA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MVNITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFRVNGSLMLVDLPGY GFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEEDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQASLI SRTLGLAPDEMAFFSALSREGRDAIWARIEAIMAEGHSPSVDGAPE
Sequences:
>Translated_206_residues MVNITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFRVNGSLMLVDLPGY GFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEEDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQASLI SRTLGLAPDEMAFFSALSREGRDAIWARIEAIMAEGHSPSVDGAPE >Mature_206_residues MVNITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRTQLINFFRVNGSLMLVDLPGY GFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTPAEEDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQASLI SRTLGLAPDEMAFFSALSREGRDAIWARIEAIMAEGHSPSVDGAPE
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=161, Percent_Identity=37.888198757764, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI145693205, Length=196, Percent_Identity=40.8163265306122, Blast_Score=156, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6320543, Length=147, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_GEOSL (Q748I9)
Other databases:
- EMBL: AE017180 - RefSeq: NP_954055.1 - HSSP: P0A6P7 - ProteinModelPortal: Q748I9 - SMR: Q748I9 - GeneID: 2688181 - GenomeReviews: AE017180_GR - KEGG: gsu:GSU3013 - NMPDR: fig|243231.1.peg.2993 - TIGR: GSU3013 - HOGENOM: HBG447097 - OMA: GYAQCSK - ProtClustDB: PRK00454 - BioCyc: GSUL243231:GSU_3013-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - InterPro: IPR005225 - TIGRFAMs: TIGR03598 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 22716; Mature: 22716
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRT CCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHH QLINFFRVNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTP HHEEEEEECCEEEEEECCCCCCCCCCHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCC AEEDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQASLISRTLGLAPDEMAFFSALSRE CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GRDAIWARIEAIMAEGHSPSVDGAPE CHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MVNITSAEFVTSGTRPEHYPPGDLLEIAFVGRSNVGKSSLINVLVNRKSLVRTSSTPGRT CCCCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHH QLINFFRVNGSLMLVDLPGYGFARVPPEVKRQWGPMVETYLAGRSCLACVVLIVDVRRTP HHEEEEEECCEEEEEECCCCCCCCCCHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHCCCC AEEDRLMLQWLRAYDIPVLVVITKCDKVSKNERAKQASLISRTLGLAPDEMAFFSALSRE CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GRDAIWARIEAIMAEGHSPSVDGAPE CHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA