| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997742
Identifier: 39997742
GI number: 39997742
Start: 2918536
End: 2919057
Strand: Reverse
Name: 39997742
Synonym: GSU2648
Alternate gene names: NA
Gene position: 2919057-2918536 (Counterclockwise)
Preceding gene: 39997751
Following gene: 39997741
Centisome position: 76.53
GC content: 57.28
Gene sequence:
>522_bases ATGGCTTTCGTTATCATGGCGCCACGCACCATCCCGAGGAGGCCTCGTCGATCCATGAAAAACCGCCTGATCGAGTCGAC CCGTTACATTATCCTCATTGCCGTGATCGGTTCCTTTGCCGCCGCCGTCACCCTCATCGCCTACGGCGGGATTCTCGCCT TTCGCACGATCACCGAAACCCTGGCCTCCGGCTACGTGAGCAGCAAGGGAATGAAATCCCTTGTGCTGTCGTTCATCGAG GTGGTCGACACCTTTCTCCTTGGCACCGTTCTCTATATTATTTCCCTTGCCCTCTACGAACTCTTCATCGACGACACGGT CCCGGTCCCCCAATGGCTTACGATTCACAACCTGGACGACCTCAAATACAAGCTGGTGGGGGTCGTGGTGGTGGTCATCG GGGTGCTCTTCCTCGGCCAGGTGATGACCTGGGACGGCCAGCGGGATCTCCTCGGCTACGGTGTGGCGGCCTCCCTGGTT ATCGCGGCCCTCACGTATTTTCTCAGTCTGAAGAAAAAATAG
Upstream 100 bases:
>100_bases CCTCCTTCCGCATTGTTCTAACAGAGGAAGTCTAGCGCGGGACTGCCCCCTGTCAAGGCGCGGCCCGTGTCCGGCGCACG GATGGTGCTGGACGGGAGGG
Downstream 100 bases:
>100_bases AATAAAACGCTGCGTGTTGACAGTGTTTACTCCCGGATGGTAATAGGTAAGGTCCGCTGCGGAAAGGCCGTTCAGCCGGC GAACGGGGGACAGTGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAFVIMAPRTIPRRPRRSMKNRLIESTRYIILIAVIGSFAAAVTLIAYGGILAFRTITETLASGYVSSKGMKSLVLSFIE VVDTFLLGTVLYIISLALYELFIDDTVPVPQWLTIHNLDDLKYKLVGVVVVVIGVLFLGQVMTWDGQRDLLGYGVAASLV IAALTYFLSLKKK
Sequences:
>Translated_173_residues MAFVIMAPRTIPRRPRRSMKNRLIESTRYIILIAVIGSFAAAVTLIAYGGILAFRTITETLASGYVSSKGMKSLVLSFIE VVDTFLLGTVLYIISLALYELFIDDTVPVPQWLTIHNLDDLKYKLVGVVVVVIGVLFLGQVMTWDGQRDLLGYGVAASLV IAALTYFLSLKKK >Mature_172_residues AFVIMAPRTIPRRPRRSMKNRLIESTRYIILIAVIGSFAAAVTLIAYGGILAFRTITETLASGYVSSKGMKSLVLSFIEV VDTFLLGTVLYIISLALYELFIDDTVPVPQWLTIHNLDDLKYKLVGVVVVVIGVLFLGQVMTWDGQRDLLGYGVAASLVI AALTYFLSLKKK
Specific function: Unknown
COG id: COG2862
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19104; Mature: 18973
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVIMAPRTIPRRPRRSMKNRLIESTRYIILIAVIGSFAAAVTLIAYGGILAFRTITET CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASGYVSSKGMKSLVLSFIEVVDTFLLGTVLYIISLALYELFIDDTVPVPQWLTIHNLDD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH LKYKLVGVVVVVIGVLFLGQVMTWDGQRDLLGYGVAASLVIAALTYFLSLKKK HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFVIMAPRTIPRRPRRSMKNRLIESTRYIILIAVIGSFAAAVTLIAYGGILAFRTITET EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASGYVSSKGMKSLVLSFIEVVDTFLLGTVLYIISLALYELFIDDTVPVPQWLTIHNLDD HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH LKYKLVGVVVVVIGVLFLGQVMTWDGQRDLLGYGVAASLVIAALTYFLSLKKK HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA