| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997733
Identifier: 39997733
GI number: 39997733
Start: 2909401
End: 2911500
Strand: Reverse
Name: 39997733
Synonym: GSU2639
Alternate gene names: NA
Gene position: 2911500-2909401 (Counterclockwise)
Preceding gene: 39997734
Following gene: 39997732
Centisome position: 76.33
GC content: 67.57
Gene sequence:
>2100_bases ATGTTTGTTCCCGATCCTGCACGAACCGTCATAGAAGCCGACGAGTCAGACGTCATGGAGATTCACCGCTCGGTGGAGCC GGTCACCGTCGCATGCGGCGATAGACCTCCTTCTCCGTGCCAGGCCTTTGTCTGCGCCATCCGCGAGGGTGAGCGTGCCC GGGTCCACGTGGCCCTCGAGCAGACGGACCGCCGCTGCGTCGCCTTGTATCGCTCCGACCGCGAGCTGGTCGACGGGGAG TCACACGATGTCCTCGTGGCTGAAGCCATTGCCTTTGCCGAATCCCTCGGCTTTGCCATGCAGGAGGTCAACCTCCGCTA CAGTAAAGCCATGCGCGAGGTGGTCATCCGGGAAGTCCGGGTGATTCGCCGCCCCGCGGCGCCTCCCATGACCGGGGTCG TGGATCCGGCGGCAAAGCGTCCCGCCGCCAAGCGCCAGGAGAAAGAAGCCAAGCCCGCTCCGGAGCCCCCGCGGGCTCCT TCTCCCCCCTCGCCTCAACCCGCAGAGCCCATGCCGAAAAAAACACCTGCTGTCGATACGAAGGCTCTAGAGGCCGAGGC GCGTCGAATGGAGGCTGAAAACACAGCCTTGGAGCGCGAGGGGAACGCCCGGCTGGAGGAACTCAACGCCCGCATAGCCG AACTTGGCCGCGAACGTGAGGAAATCCGGCGGGCCCTTGCCGGGAAGGAAAAGTCACTCGAAGCCGAGATCGCGCAACTG GAGCGCCGAAAGGCGGAAGACGAACAGGAGTTGGCCAAACGGACCGCCGCCCATGATGCCGAGGTGGCTCGCCTGAAGGC GGACATCGATCAACTCGGCGCGGAGCTGGCGCGACTCGGTTCCGGCGAGTCGACCGAGGTGGCGGAACTCACCGCGGAGC TCAGCCGGTTGACGGCGGAACGGGAACGGGCCGAGTCCTCGGCCGAGAGCGCCGAATCCGAGCTTCGCGACCGGTTGGCG CGTTTGTCGGCCGAATGGGAAGAGGTCAGAAAGGCTTCCGAAGAGCGGCAGGAGACCCTGGCGCGCGATATCGCCCGCAT GGCACGGGAGAAGGAAGAGGCTGAGCGGCTCGGGTCCGAGCGGGTCCGGGAGCTGGAACAGGCGGTCCGGCGCGGGGAAG AGGAACGCGAAGCCGCCGGCGCCGTTGCCGCCCGCGATATCGAATCGCTGGAGGAATCGCTCCGGCAGCAGGCCCGTGAG CGGGAAGCGGAACGGAAAGATGCTGTGGCGCGGCTGGCTGCGCTGGTCGCCGAAGAGACGGTGGTTGCGGCCGAGCGGGA CGCGGTTCGCCGCCTGGTGCTCCGCACCGGTGAGGGAGGCGCCGAGGAGGCGCTGGCGGCAGCAGGGGCGGAAACGGCAA CGCTCCGCGCCGAGCTGGAGCGGCTTGCCTCCGCCAAGGCGCTGGCCGAGCAGACTGCCGCCGCGAGAATCGCCGCGCTG CAGGCAGAGGTGGAACGTCTTGGCGCGGCGCGGGAACCGGTCCGTCCCGTACGTCGCGAGACTGCTCCCCGACCGGCGGA GTTGCCGCCGCAGCCGGTTTTGCCTCCGTCCGTCTCCTCCGACGCCGGGGCGGACAGGGCGTCCACCGCGCCTTCCGAAT CCGGCTGGAGTGCCGGCGTGGCTGCCACGGTCGACGAGTTGCTCGCCGGCGAAGAAAATGCATCAGACGACTTTTCCTTC GGGGATGGGGCTGATTCCGGCTCGTCCGGCGGGGGGGCCTTCCGCCTCGATCCGTCCCTGTCCTGCGTTGAATACCACGA TCCCGCCGATGTGATTGAACTCCACCAGCCCCTCAACTACGTGAACGTGTCGCCGCCGGGGCATGTGCCCCAGACCTGCG GTGCGTACATCTGCGTCCTGAAACGGCGGGAAACCGTCCGGGTCTACGTGGCCTGGAGTCTGACCGCCGACCGCAAGACC CTGGTCTACGTCCCCGAGCATCCTCCCTCCGGGGAGGCCGACAGTACCGGGGTGGTGCGTGATGCCTTCGCCTTCGTAGA AACCGTTGGGTTCATGATGGACAGGCTGCGGCTCCCCGATGATCCCGTCAAGCGGGGCAAGGCACTTGCCGCGGTGCCGG TCCTCTGCCGCAGGGGATAA
Upstream 100 bases:
>100_bases TCAGTGCGCGGCCCGACGTCGTTTGACCGTCAATGTGTCATTGTTTCCCGCACGGGGGATCCGGTTTGCCTTCCGCCCAA AATGGGGTAGAGTGTAGCTC
Downstream 100 bases:
>100_bases CGGGCCGTGACCACCGCCCTCTGGCTTCTCGCCGCTGTCCTCATCCTGATCGGTATTGCCGGGACGCTTCTGCCGGCACT GCCGGGCATTCCCCTTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MFVPDPARTVIEADESDVMEIHRSVEPVTVACGDRPPSPCQAFVCAIREGERARVHVALEQTDRRCVALYRSDRELVDGE SHDVLVAEAIAFAESLGFAMQEVNLRYSKAMREVVIREVRVIRRPAAPPMTGVVDPAAKRPAAKRQEKEAKPAPEPPRAP SPPSPQPAEPMPKKTPAVDTKALEAEARRMEAENTALEREGNARLEELNARIAELGREREEIRRALAGKEKSLEAEIAQL ERRKAEDEQELAKRTAAHDAEVARLKADIDQLGAELARLGSGESTEVAELTAELSRLTAERERAESSAESAESELRDRLA RLSAEWEEVRKASEERQETLARDIARMAREKEEAERLGSERVRELEQAVRRGEEEREAAGAVAARDIESLEESLRQQARE REAERKDAVARLAALVAEETVVAAERDAVRRLVLRTGEGGAEEALAAAGAETATLRAELERLASAKALAEQTAAARIAAL QAEVERLGAAREPVRPVRRETAPRPAELPPQPVLPPSVSSDAGADRASTAPSESGWSAGVAATVDELLAGEENASDDFSF GDGADSGSSGGGAFRLDPSLSCVEYHDPADVIELHQPLNYVNVSPPGHVPQTCGAYICVLKRRETVRVYVAWSLTADRKT LVYVPEHPPSGEADSTGVVRDAFAFVETVGFMMDRLRLPDDPVKRGKALAAVPVLCRRG
Sequences:
>Translated_699_residues MFVPDPARTVIEADESDVMEIHRSVEPVTVACGDRPPSPCQAFVCAIREGERARVHVALEQTDRRCVALYRSDRELVDGE SHDVLVAEAIAFAESLGFAMQEVNLRYSKAMREVVIREVRVIRRPAAPPMTGVVDPAAKRPAAKRQEKEAKPAPEPPRAP SPPSPQPAEPMPKKTPAVDTKALEAEARRMEAENTALEREGNARLEELNARIAELGREREEIRRALAGKEKSLEAEIAQL ERRKAEDEQELAKRTAAHDAEVARLKADIDQLGAELARLGSGESTEVAELTAELSRLTAERERAESSAESAESELRDRLA RLSAEWEEVRKASEERQETLARDIARMAREKEEAERLGSERVRELEQAVRRGEEEREAAGAVAARDIESLEESLRQQARE REAERKDAVARLAALVAEETVVAAERDAVRRLVLRTGEGGAEEALAAAGAETATLRAELERLASAKALAEQTAAARIAAL QAEVERLGAAREPVRPVRRETAPRPAELPPQPVLPPSVSSDAGADRASTAPSESGWSAGVAATVDELLAGEENASDDFSF GDGADSGSSGGGAFRLDPSLSCVEYHDPADVIELHQPLNYVNVSPPGHVPQTCGAYICVLKRRETVRVYVAWSLTADRKT LVYVPEHPPSGEADSTGVVRDAFAFVETVGFMMDRLRLPDDPVKRGKALAAVPVLCRRG >Mature_699_residues MFVPDPARTVIEADESDVMEIHRSVEPVTVACGDRPPSPCQAFVCAIREGERARVHVALEQTDRRCVALYRSDRELVDGE SHDVLVAEAIAFAESLGFAMQEVNLRYSKAMREVVIREVRVIRRPAAPPMTGVVDPAAKRPAAKRQEKEAKPAPEPPRAP SPPSPQPAEPMPKKTPAVDTKALEAEARRMEAENTALEREGNARLEELNARIAELGREREEIRRALAGKEKSLEAEIAQL ERRKAEDEQELAKRTAAHDAEVARLKADIDQLGAELARLGSGESTEVAELTAELSRLTAERERAESSAESAESELRDRLA RLSAEWEEVRKASEERQETLARDIARMAREKEEAERLGSERVRELEQAVRRGEEEREAAGAVAARDIESLEESLRQQARE REAERKDAVARLAALVAEETVVAAERDAVRRLVLRTGEGGAEEALAAAGAETATLRAELERLASAKALAEQTAAARIAAL QAEVERLGAAREPVRPVRRETAPRPAELPPQPVLPPSVSSDAGADRASTAPSESGWSAGVAATVDELLAGEENASDDFSF GDGADSGSSGGGAFRLDPSLSCVEYHDPADVIELHQPLNYVNVSPPGHVPQTCGAYICVLKRRETVRVYVAWSLTADRKT LVYVPEHPPSGEADSTGVVRDAFAFVETVGFMMDRLRLPDDPVKRGKALAAVPVLCRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76092; Mature: 76092
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVPDPARTVIEADESDVMEIHRSVEPVTVACGDRPPSPCQAFVCAIREGERARVHVALE CCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEC QTDRRCVALYRSDRELVDGESHDVLVAEAIAFAESLGFAMQEVNLRYSKAMREVVIREVR HHCCHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRRPAAPPMTGVVDPAAKRPAAKRQEKEAKPAPEPPRAPSPPSPQPAEPMPKKTPAVDT HHHCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH KALEAEARRMEAENTALEREGNARLEELNARIAELGREREEIRRALAGKEKSLEAEIAQL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ERRKAEDEQELAKRTAAHDAEVARLKADIDQLGAELARLGSGESTEVAELTAELSRLTAE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RERAESSAESAESELRDRLARLSAEWEEVRKASEERQETLARDIARMAREKEEAERLGSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVRELEQAVRRGEEEREAAGAVAARDIESLEESLRQQAREREAERKDAVARLAALVAEET HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAAERDAVRRLVLRTGEGGAEEALAAAGAETATLRAELERLASAKALAEQTAAARIAAL HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAEVERLGAAREPVRPVRRETAPRPAELPPQPVLPPSVSSDAGADRASTAPSESGWSAGV HHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AATVDELLAGEENASDDFSFGDGADSGSSGGGAFRLDPSLSCVEYHDPADVIELHQPLNY HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHHCCCCE VNVSPPGHVPQTCGAYICVLKRRETVRVYVAWSLTADRKTLVYVPEHPPSGEADSTGVVR EECCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCHHH DAFAFVETVGFMMDRLRLPDDPVKRGKALAAVPVLCRRG HHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MFVPDPARTVIEADESDVMEIHRSVEPVTVACGDRPPSPCQAFVCAIREGERARVHVALE CCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEC QTDRRCVALYRSDRELVDGESHDVLVAEAIAFAESLGFAMQEVNLRYSKAMREVVIREVR HHCCHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRRPAAPPMTGVVDPAAKRPAAKRQEKEAKPAPEPPRAPSPPSPQPAEPMPKKTPAVDT HHHCCCCCCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH KALEAEARRMEAENTALEREGNARLEELNARIAELGREREEIRRALAGKEKSLEAEIAQL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ERRKAEDEQELAKRTAAHDAEVARLKADIDQLGAELARLGSGESTEVAELTAELSRLTAE HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH RERAESSAESAESELRDRLARLSAEWEEVRKASEERQETLARDIARMAREKEEAERLGSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVRELEQAVRRGEEEREAAGAVAARDIESLEESLRQQAREREAERKDAVARLAALVAEET HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAAERDAVRRLVLRTGEGGAEEALAAAGAETATLRAELERLASAKALAEQTAAARIAAL HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAEVERLGAAREPVRPVRRETAPRPAELPPQPVLPPSVSSDAGADRASTAPSESGWSAGV HHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH AATVDELLAGEENASDDFSFGDGADSGSSGGGAFRLDPSLSCVEYHDPADVIELHQPLNY HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCHHHHHHHCCCCE VNVSPPGHVPQTCGAYICVLKRRETVRVYVAWSLTADRKTLVYVPEHPPSGEADSTGVVR EECCCCCCCCHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCHHH DAFAFVETVGFMMDRLRLPDDPVKRGKALAAVPVLCRRG HHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA