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The map label for this gene is 39997704

Identifier: 39997704

GI number: 39997704

Start: 2879012

End: 2880550

Strand: Reverse

Name: 39997704

Synonym: GSU2610

Alternate gene names: NA

Gene position: 2880550-2879012 (Counterclockwise)

Preceding gene: 39997705

Following gene: 39997703

Centisome position: 75.52

GC content: 65.24

Gene sequence:

>1539_bases
ATGTCATCATTGGCACCCAGATTGTGGGTCGGCATAGCGTTCGCAGCCGTGGCACTTCTCGGCGTGTCCGGGGGAGCGCA
TGCCCTTGACCGCCGGTTCGAACTTACGCCCAGCCTGCTTTCCCAGGGGGGCGAGGCTCCCGCGGCCCCCCGCAGCGAAG
GGCGCCCGGCCCGTAAAAGCGAACGGGCTTCGGCAGGAGTCACCGACTACACGGTCCGTCCGGGCGACCACATTTTCAAG
ATCCTCATGAAGGAATACGGGTTTTCCAACCGGGAGGCCGAGACGCTCATCCCCGAGGTTCGCCGGATCAACGGCATCAC
CGACATCCGCCGGCTGCGGGTGGGCCAGACCATTCGCATCCCCCTGGGCACTGCCGCCGGCAGCGACGTGCGGGGCCACA
GCCGTCCCGTTGCCCGGGAGGCAGCCGTTGCCTCCGTCGCCAGCGTGCCCGCGGCAAAGGATACGGGCCATCTGCTCCGG
ATGACCAGTTATGCCGGCGCGCGCGCGACCCACGATCTCGACGCGGCCCGCCGCCTGTGGGACGGACTCGTTGCCGCCGA
GGTGAGGGATGCGCGTCCCATCAGGATCGAGGACCGGAATTTCTCCCTTTCTCTCGATCCGGAGAATTTCCCCACGTTTC
CTGCCGCCGACGGCGGCCGCATCCTGGTTGACGCCGACGGCAAGATCCCGCCCCTAGTGCGGGCACTCATCGAGGAGAAG
GAACCTTCGGTCAGGATCGTGTCGGAGAATCCCCGCAACCGCAGGCGCTTCCTGGCCTCGCTGCTGGAGGGGGCCGGGTT
CTACTCGGTGGAGGAGAACGTCTCCCTGGAGTTCGGCGCCGATCCCAAGCTGACCGTCACAGCCGACTTCAAGGTGGAGA
AAAGCCCTGACAGTCTGCTGCACAACGACGTGATCCTCCTGAACGTGGACGAGTACCGGCGCGGGGTGCCCCCCGCTCTG
ACCGGTTTCCTGAAGCGCGAAGGGTTTCAGATGGTGGAGCCGTTCCTGGGCCGGGGCGAATCTGCTCCTCCCGCGAGCCA
GACTCTGTACCAGATCACGGCCAGTGAGCCGCGCGACATTGCCGACTCGCTCCTCAGGGCGCTCAATCTCCGTTACGACG
TAGACCGTAGCGTGGAGCTCTTCGGGTCCGGCGACGGCGGTGTTACGCTGTTCGTCCGGGCCGACCGTTATTTCGAGAAC
GGTGGCGACCGGTTCGTGGTGAGCCACTTCGACGGAGACCCGGTGAGCTACACCCTCACCCGCTTGCTGGAGACCAGGGG
CTACCGGGTGATCATGCTCGGCGACCATGACGATTTCCGCATGGTGGCGGAAAAAATCTTCGGTCGCCTGCGGATGCCGG
GGTCCTTTGCCCGCTACGATCTGGTTCCCTACCGGGAGGCCCCCTACGGCATCCAGATGTCGGGCTTCCGGGTGCCCCGC
TCCGGGAGTGCGACCGGGGGCTTTTTTACCAATGCGGCATTGAACCCCCTGTTCCGCGATCTGCTCGATTTCAACGGCTA
CTCGATCGTTTCCTACTGA

Upstream 100 bases:

>100_bases
GGGGCATCGTCCTCTCGCTCTCCTGATGCCCGGCACCAACCCGCGGACGAAGCACGACGGTTTCGTGACGCGGGATATTC
ACGCATTGACGGGAGAAGGA

Downstream 100 bases:

>100_bases
ACGGCGGCCGATCCCGAGGTTCTTTGCCCCCATGTCCCAGAAAAAGGTTGGCGAGATACTTATCGAGCACCGGCTGATCT
CCGAGGATCAGCTCCGCGAG

Product: LysM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSSLAPRLWVGIAFAAVALLGVSGGAHALDRRFELTPSLLSQGGEAPAAPRSEGRPARKSERASAGVTDYTVRPGDHIFK
ILMKEYGFSNREAETLIPEVRRINGITDIRRLRVGQTIRIPLGTAAGSDVRGHSRPVAREAAVASVASVPAAKDTGHLLR
MTSYAGARATHDLDAARRLWDGLVAAEVRDARPIRIEDRNFSLSLDPENFPTFPAADGGRILVDADGKIPPLVRALIEEK
EPSVRIVSENPRNRRRFLASLLEGAGFYSVEENVSLEFGADPKLTVTADFKVEKSPDSLLHNDVILLNVDEYRRGVPPAL
TGFLKREGFQMVEPFLGRGESAPPASQTLYQITASEPRDIADSLLRALNLRYDVDRSVELFGSGDGGVTLFVRADRYFEN
GGDRFVVSHFDGDPVSYTLTRLLETRGYRVIMLGDHDDFRMVAEKIFGRLRMPGSFARYDLVPYREAPYGIQMSGFRVPR
SGSATGGFFTNAALNPLFRDLLDFNGYSIVSY

Sequences:

>Translated_512_residues
MSSLAPRLWVGIAFAAVALLGVSGGAHALDRRFELTPSLLSQGGEAPAAPRSEGRPARKSERASAGVTDYTVRPGDHIFK
ILMKEYGFSNREAETLIPEVRRINGITDIRRLRVGQTIRIPLGTAAGSDVRGHSRPVAREAAVASVASVPAAKDTGHLLR
MTSYAGARATHDLDAARRLWDGLVAAEVRDARPIRIEDRNFSLSLDPENFPTFPAADGGRILVDADGKIPPLVRALIEEK
EPSVRIVSENPRNRRRFLASLLEGAGFYSVEENVSLEFGADPKLTVTADFKVEKSPDSLLHNDVILLNVDEYRRGVPPAL
TGFLKREGFQMVEPFLGRGESAPPASQTLYQITASEPRDIADSLLRALNLRYDVDRSVELFGSGDGGVTLFVRADRYFEN
GGDRFVVSHFDGDPVSYTLTRLLETRGYRVIMLGDHDDFRMVAEKIFGRLRMPGSFARYDLVPYREAPYGIQMSGFRVPR
SGSATGGFFTNAALNPLFRDLLDFNGYSIVSY
>Mature_511_residues
SSLAPRLWVGIAFAAVALLGVSGGAHALDRRFELTPSLLSQGGEAPAAPRSEGRPARKSERASAGVTDYTVRPGDHIFKI
LMKEYGFSNREAETLIPEVRRINGITDIRRLRVGQTIRIPLGTAAGSDVRGHSRPVAREAAVASVASVPAAKDTGHLLRM
TSYAGARATHDLDAARRLWDGLVAAEVRDARPIRIEDRNFSLSLDPENFPTFPAADGGRILVDADGKIPPLVRALIEEKE
PSVRIVSENPRNRRRFLASLLEGAGFYSVEENVSLEFGADPKLTVTADFKVEKSPDSLLHNDVILLNVDEYRRGVPPALT
GFLKREGFQMVEPFLGRGESAPPASQTLYQITASEPRDIADSLLRALNLRYDVDRSVELFGSGDGGVTLFVRADRYFENG
GDRFVVSHFDGDPVSYTLTRLLETRGYRVIMLGDHDDFRMVAEKIFGRLRMPGSFARYDLVPYREAPYGIQMSGFRVPRS
GSATGGFFTNAALNPLFRDLLDFNGYSIVSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56258; Mature: 56127

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLAPRLWVGIAFAAVALLGVSGGAHALDRRFELTPSLLSQGGEAPAAPRSEGRPARKS
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHH
ERASAGVTDYTVRPGDHIFKILMKEYGFSNREAETLIPEVRRINGITDIRRLRVGQTIRI
HHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEE
PLGTAAGSDVRGHSRPVAREAAVASVASVPAAKDTGHLLRMTSYAGARATHDLDAARRLW
EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
DGLVAAEVRDARPIRIEDRNFSLSLDPENFPTFPAADGGRILVDADGKIPPLVRALIEEK
HHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCC
EPSVRIVSENPRNRRRFLASLLEGAGFYSVEENVSLEFGADPKLTVTADFKVEKSPDSLL
CCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCEEEEEEEEEECCCHHHH
HNDVILLNVDEYRRGVPPALTGFLKREGFQMVEPFLGRGESAPPASQTLYQITASEPRDI
HCCEEEEECHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH
ADSLLRALNLRYDVDRSVELFGSGDGGVTLFVRADRYFENGGDRFVVSHFDGDPVSYTLT
HHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEECHHHHCCCCEEEEEECCCCCHHHHHH
RLLETRGYRVIMLGDHDDFRMVAEKIFGRLRMPGSFARYDLVPYREAPYGIQMSGFRVPR
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCEEECCEECCC
SGSATGGFFTNAALNPLFRDLLDFNGYSIVSY
CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure 
SSLAPRLWVGIAFAAVALLGVSGGAHALDRRFELTPSLLSQGGEAPAAPRSEGRPARKS
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCHH
ERASAGVTDYTVRPGDHIFKILMKEYGFSNREAETLIPEVRRINGITDIRRLRVGQTIRI
HHHCCCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEE
PLGTAAGSDVRGHSRPVAREAAVASVASVPAAKDTGHLLRMTSYAGARATHDLDAARRLW
EECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
DGLVAAEVRDARPIRIEDRNFSLSLDPENFPTFPAADGGRILVDADGKIPPLVRALIEEK
HHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCC
EPSVRIVSENPRNRRRFLASLLEGAGFYSVEENVSLEFGADPKLTVTADFKVEKSPDSLL
CCCEEEECCCCHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCEEEEEEEEEECCCHHHH
HNDVILLNVDEYRRGVPPALTGFLKREGFQMVEPFLGRGESAPPASQTLYQITASEPRDI
HCCEEEEECHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHH
ADSLLRALNLRYDVDRSVELFGSGDGGVTLFVRADRYFENGGDRFVVSHFDGDPVSYTLT
HHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEECHHHHCCCCEEEEEECCCCCHHHHHH
RLLETRGYRVIMLGDHDDFRMVAEKIFGRLRMPGSFARYDLVPYREAPYGIQMSGFRVPR
HHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHEECCCCCCCCCCEEECCEECCC
SGSATGGFFTNAALNPLFRDLLDFNGYSIVSY
CCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA