| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997694
Identifier: 39997694
GI number: 39997694
Start: 2865265
End: 2866311
Strand: Reverse
Name: 39997694
Synonym: GSU2599
Alternate gene names: NA
Gene position: 2866311-2865265 (Counterclockwise)
Preceding gene: 39997695
Following gene: 39997692
Centisome position: 75.15
GC content: 51.77
Gene sequence:
>1047_bases ATGAGATTTTACACTAAGACTCACAAGTACTACTGCGGAATTGATCTTCATGCCCGAAAAAAGTACGTCTGCATTCTCGA CTCGGAAGGGACCGTGCTGGTTCATCGCGAAATCAACTGCAATCCTGAGAGCTTCCTTCGCCTCGTGGCACCCTACCGGG AGGACTTGGTTGTCGGCGTGGAATGCATGTTCGCATGGTATTGGCTGGCAGACCTTTGCCGTAATGAAAAGATCGAGTTT GTGCTCGGTCACGCCCTTTACATGAAGGCAGTCCACGGTGGCAAAGCAAAGAGCGACAAGATTGACGCCCACAAGATTGC TGTGCTGCTCCGCGGCGGCATGTTTCCCTTAGCCTACGTCTACCCGCCGGAAATGCGGGCAACACGGGACCTCCTGCGCC GCCGGAACTTTTTCGTCAGAAAACGTGCTGAGCTTATGGCACACATCCAGAACACGGTAACCCAATATAATCTGGCTCCT CTTGGCATTGATCTCGGAGTCGAAGAGAACCGCCATGAAGTAGCTCAGCTCTTCCACGATCCGGAAGTGAGGAAAATTAT CGAAATTGACGTTGCCATGATCGACGCCTTTGACGATGTCATCAATGTCCTCGAACCGGACATAGAAAAAACGGCCCGGC AACACAACCTGCATGCCCTCAAACTTCTGCGCTCAATCAACGGCGTGGGAAAGGTGCTGGGCCTGGTAATGCTCTACGAG ATCCATGACATAAATCGTTTCCCGACCGTGCAAGACTTCTCTTCCTACTGCAGGCTGGTGAAATGTGCCCACGAATCAGC GGGAAAGAAAAAGGGGGTCGGCGGTTCCAAGATAGGCAACGTCCATTTGAAATGGGCCTTCTCTGAGGCCGCTGTGTTCT TCGTGCGCCACAATCCCCAGGCAAAAATCCTGATGGAGAAACTGGTCAAGATTCATGGCAAAGGGAAAGCGATTTCGATC CTTGCCCACAAACTGGCACGAGCGATTTTCTACATGCTGAAAAACAATGTGCCGTTCGACCGGGAAAAGTTTTTGGCAAC GGCGTAA
Upstream 100 bases:
>100_bases ACCTACTAATAACGGGATACTGTGTAAGGCCCCCTCTGGGCATACGGATTAGCGTATGCTGGACTTTGGCGAAACCCATT CTCCAAAGGAGGCCTTACAC
Downstream 100 bases:
>100_bases AGCTGGAGGGGACAGAGGCAGCTTAGTGCACAACTGGAGCCACACGAGCAAGCATGACCACGACCGTGAAAGACAACGAG GTGCGGCTGAGAACACGTAC
Product: ISGsu4, transposase
Products: NA
Alternate protein names: Transposase For Insertion Sequence Element; ISGsu4 Transposase; Arginyl-TRNA Synthetase Class Ic; Transposase ISC; ISGsu5 Transposase; Transposase Or Inactivated Derivative; ISGsu5 Transposase Truncation
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRFYTKTHKYYCGIDLHARKKYVCILDSEGTVLVHREINCNPESFLRLVAPYREDLVVGVECMFAWYWLADLCRNEKIEF VLGHALYMKAVHGGKAKSDKIDAHKIAVLLRGGMFPLAYVYPPEMRATRDLLRRRNFFVRKRAELMAHIQNTVTQYNLAP LGIDLGVEENRHEVAQLFHDPEVRKIIEIDVAMIDAFDDVINVLEPDIEKTARQHNLHALKLLRSINGVGKVLGLVMLYE IHDINRFPTVQDFSSYCRLVKCAHESAGKKKGVGGSKIGNVHLKWAFSEAAVFFVRHNPQAKILMEKLVKIHGKGKAISI LAHKLARAIFYMLKNNVPFDREKFLATA
Sequences:
>Translated_348_residues MRFYTKTHKYYCGIDLHARKKYVCILDSEGTVLVHREINCNPESFLRLVAPYREDLVVGVECMFAWYWLADLCRNEKIEF VLGHALYMKAVHGGKAKSDKIDAHKIAVLLRGGMFPLAYVYPPEMRATRDLLRRRNFFVRKRAELMAHIQNTVTQYNLAP LGIDLGVEENRHEVAQLFHDPEVRKIIEIDVAMIDAFDDVINVLEPDIEKTARQHNLHALKLLRSINGVGKVLGLVMLYE IHDINRFPTVQDFSSYCRLVKCAHESAGKKKGVGGSKIGNVHLKWAFSEAAVFFVRHNPQAKILMEKLVKIHGKGKAISI LAHKLARAIFYMLKNNVPFDREKFLATA >Mature_348_residues MRFYTKTHKYYCGIDLHARKKYVCILDSEGTVLVHREINCNPESFLRLVAPYREDLVVGVECMFAWYWLADLCRNEKIEF VLGHALYMKAVHGGKAKSDKIDAHKIAVLLRGGMFPLAYVYPPEMRATRDLLRRRNFFVRKRAELMAHIQNTVTQYNLAP LGIDLGVEENRHEVAQLFHDPEVRKIIEIDVAMIDAFDDVINVLEPDIEKTARQHNLHALKLLRSINGVGKVLGLVMLYE IHDINRFPTVQDFSSYCRLVKCAHESAGKKKGVGGSKIGNVHLKWAFSEAAVFFVRHNPQAKILMEKLVKIHGKGKAISI LAHKLARAIFYMLKNNVPFDREKFLATA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39867; Mature: 39867
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYTKTHKYYCGIDLHARKKYVCILDSEGTVLVHREINCNPESFLRLVAPYREDLVVGV CCCEECCCCEEEEEEEECCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHH ECMFAWYWLADLCRNEKIEFVLGHALYMKAVHGGKAKSDKIDAHKIAVLLRGGMFPLAYV HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEE YPPEMRATRDLLRRRNFFVRKRAELMAHIQNTVTQYNLAPLGIDLGVEENRHEVAQLFHD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCC PEVRKIIEIDVAMIDAFDDVINVLEPDIEKTARQHNLHALKLLRSINGVGKVLGLVMLYE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHDINRFPTVQDFSSYCRLVKCAHESAGKKKGVGGSKIGNVHLKWAFSEAAVFFVRHNPQ HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCC AKILMEKLVKIHGKGKAISILAHKLARAIFYMLKNNVPFDREKFLATA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure MRFYTKTHKYYCGIDLHARKKYVCILDSEGTVLVHREINCNPESFLRLVAPYREDLVVGV CCCEECCCCEEEEEEEECCCEEEEEECCCCCEEEEEECCCCHHHHHHHHHCHHHHHHHHH ECMFAWYWLADLCRNEKIEFVLGHALYMKAVHGGKAKSDKIDAHKIAVLLRGGMFPLAYV HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEE YPPEMRATRDLLRRRNFFVRKRAELMAHIQNTVTQYNLAPLGIDLGVEENRHEVAQLFHD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCC PEVRKIIEIDVAMIDAFDDVINVLEPDIEKTARQHNLHALKLLRSINGVGKVLGLVMLYE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHDINRFPTVQDFSSYCRLVKCAHESAGKKKGVGGSKIGNVHLKWAFSEAAVFFVRHNPQ HHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEECCC AKILMEKLVKIHGKGKAISILAHKLARAIFYMLKNNVPFDREKFLATA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA