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The map label for this gene is trg [C]

Identifier: 39997674

GI number: 39997674

Start: 2840564

End: 2842195

Strand: Reverse

Name: trg [C]

Synonym: GSU2579

Alternate gene names: 39997674

Gene position: 2842195-2840564 (Counterclockwise)

Preceding gene: 39997675

Following gene: 308513325

Centisome position: 74.52

GC content: 65.93

Gene sequence:

>1632_bases
ATGCAATGGTTGAGGAACCTGAGAGTGGGAATCAAGCTCGTGGCCGCATTCAGCGTCGTCGCCGCGATCGCCGCCGTGGT
CGGTTTCATCGGCTCCGTGGAGATTCGCAGAATCCAGAGCGACGACCGGAGGCTGTACGAAAAGATCACCGTGCCCATGC
ACGATCTGGCGGAGATGTCGGTGGCCTTCCAGCGGGTCAGGATCAACCTGCGCGACGCGGTCGAGGCGACCGACCCGGCG
GAGCAGGCACTGTACCTCGATACGATCCGGAAACTCCGGGAGGTCATCACGGAGCACCAGGACAATTTCGAGAAAACCAT
CCTGACCGACGAGGGCCGCACGCTGTTCAACGAGTATAAGGAAGCCCGCAAGGTCTATGGGGGCTACATCGACAACATCA
TGCAACTGAACAGCGCGAAAAAGGTCACCGAGGCAAAGGCGCTGCTCCACGGTGACGCCAAGAAAGCGGCACTGCATTAC
CAGGAGCTGCTCAGCAAGCTGGTCGACGCCAAGCAGGCGCAGGCAAAGCTGACCGCCGAGCGCAACGAGCACGTTGCCTC
GACCTCCTTTACGGTGATGGCGGTGCTGTCGGCGGTGGGCGTGATCCTGGCCATCGGACTCGGCCTGCTCATTTCCCGGA
TGATCACCACTCCGCTGAGCCGGGCGGTGGACGTGGCCAACCGCCTGGCGGACGGCGACCTGACGGTTGTCGTTGCCGCC
ACCTCCACGGACGAGACGGGCCGGCTGCTGACCGCCATGCAGAACATGGTGCGGAGCCTGCGGGAGATGGTGACCCAGAC
CGCAACCATCTCCGCCGGTATTGCGTCTGCCTCGTCCCAGCTCCACGCTACGTCCGAGCAGATCGCCACCGGCACCGAGG
AAGTGGCTTCCCAGGCCGGCACCGTGGCCACCGCCAGCGAGGAGATGTCGGCCACCAGCCAGGACATCGCGACCAACTGC
CATGCCGCCGCCGGGAGTGCCGAGCAGGTGGCCGCCACCACCCGCCAGGGGTTCGACGTGGTCAGGCACACCGTTGATGG
AATTCGCGACCGGGGCGAAAAAACCCGCCAGAATGCCCAGATCGTGGCATCGCTCGGCGACCGCTCCGAGCAGATCGGCG
ACATCGTGGGCACCATCGAGGACATCGCCGACCAGACCAACCTGCTGGCGCTCAACGCCGCCATCGAGGCGGCCCGGGCC
GGGGAACAGGGCCGCGGGTTCGCGGTGGTGGCCGACGAGGTGAGGGCCCTGGCCGAGCGGACCACCCGGGCCACCAAGGA
GATCGGTGAGATGATCCGGGCCATCCAGCAGGAAACCAAGACGGCCATCGTCTCCATGGAGGAGGGGGTGCGCGGGACGG
AGCGGGGCGCCATCGAGGCGGCTCAGCTGGAAACGGCGCTCCAGCAGATCCTGAACCAGGTGAACGAGGTGAGCATGCAG
GTGGGACAGATCGCGACGGCCGCCGAAGAGCAGACCGCGACCACCGGCGAGGTGACCAGCAATATCCAGCAGATCACCGA
GGTGGTGCACCAGACCGCCCAGGGGGCCGAAGAGACGGCCGATGCCGCCGCCCAGCTGGCCCGTCAGGCCCAGGATCTGC
AAGCCCTGATCGGCCGCTTCAGGCTGGCCTGA

Upstream 100 bases:

>100_bases
AGGAGCATCAAGCGCTTTTCCCCCGCCGAGCCGGAGGAGTGCGGCCGGGAATCACGGCTGTCACAGCCCGCCAACGACTG
AACAAAGAGGAGATACCATC

Downstream 100 bases:

>100_bases
GCGTTCGCGTCGCGAGCATACGGAGGGAGTCATGGCACACGCACTGGTAACGAATGTCTCGGTCGGCCCGAGCGATGAAC
TGATTCAGCTGGTCAGCTTC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MQWLRNLRVGIKLVAAFSVVAAIAAVVGFIGSVEIRRIQSDDRRLYEKITVPMHDLAEMSVAFQRVRINLRDAVEATDPA
EQALYLDTIRKLREVITEHQDNFEKTILTDEGRTLFNEYKEARKVYGGYIDNIMQLNSAKKVTEAKALLHGDAKKAALHY
QELLSKLVDAKQAQAKLTAERNEHVASTSFTVMAVLSAVGVILAIGLGLLISRMITTPLSRAVDVANRLADGDLTVVVAA
TSTDETGRLLTAMQNMVRSLREMVTQTATISAGIASASSQLHATSEQIATGTEEVASQAGTVATASEEMSATSQDIATNC
HAAAGSAEQVAATTRQGFDVVRHTVDGIRDRGEKTRQNAQIVASLGDRSEQIGDIVGTIEDIADQTNLLALNAAIEAARA
GEQGRGFAVVADEVRALAERTTRATKEIGEMIRAIQQETKTAIVSMEEGVRGTERGAIEAAQLETALQQILNQVNEVSMQ
VGQIATAAEEQTATTGEVTSNIQQITEVVHQTAQGAEETADAAAQLARQAQDLQALIGRFRLA

Sequences:

>Translated_543_residues
MQWLRNLRVGIKLVAAFSVVAAIAAVVGFIGSVEIRRIQSDDRRLYEKITVPMHDLAEMSVAFQRVRINLRDAVEATDPA
EQALYLDTIRKLREVITEHQDNFEKTILTDEGRTLFNEYKEARKVYGGYIDNIMQLNSAKKVTEAKALLHGDAKKAALHY
QELLSKLVDAKQAQAKLTAERNEHVASTSFTVMAVLSAVGVILAIGLGLLISRMITTPLSRAVDVANRLADGDLTVVVAA
TSTDETGRLLTAMQNMVRSLREMVTQTATISAGIASASSQLHATSEQIATGTEEVASQAGTVATASEEMSATSQDIATNC
HAAAGSAEQVAATTRQGFDVVRHTVDGIRDRGEKTRQNAQIVASLGDRSEQIGDIVGTIEDIADQTNLLALNAAIEAARA
GEQGRGFAVVADEVRALAERTTRATKEIGEMIRAIQQETKTAIVSMEEGVRGTERGAIEAAQLETALQQILNQVNEVSMQ
VGQIATAAEEQTATTGEVTSNIQQITEVVHQTAQGAEETADAAAQLARQAQDLQALIGRFRLA
>Mature_543_residues
MQWLRNLRVGIKLVAAFSVVAAIAAVVGFIGSVEIRRIQSDDRRLYEKITVPMHDLAEMSVAFQRVRINLRDAVEATDPA
EQALYLDTIRKLREVITEHQDNFEKTILTDEGRTLFNEYKEARKVYGGYIDNIMQLNSAKKVTEAKALLHGDAKKAALHY
QELLSKLVDAKQAQAKLTAERNEHVASTSFTVMAVLSAVGVILAIGLGLLISRMITTPLSRAVDVANRLADGDLTVVVAA
TSTDETGRLLTAMQNMVRSLREMVTQTATISAGIASASSQLHATSEQIATGTEEVASQAGTVATASEEMSATSQDIATNC
HAAAGSAEQVAATTRQGFDVVRHTVDGIRDRGEKTRQNAQIVASLGDRSEQIGDIVGTIEDIADQTNLLALNAAIEAARA
GEQGRGFAVVADEVRALAERTTRATKEIGEMIRAIQQETKTAIVSMEEGVRGTERGAIEAAQLETALQQILNQVNEVSMQ
VGQIATAAEEQTATTGEVTSNIQQITEVVHQTAQGAEETADAAAQLARQAQDLQALIGRFRLA

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=383, Percent_Identity=30.8093994778068, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1788195, Length=303, Percent_Identity=33.003300330033, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1788194, Length=386, Percent_Identity=30.3108808290155, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI2367378, Length=400, Percent_Identity=28, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI1789453, Length=351, Percent_Identity=28.7749287749288, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 58356; Mature: 58356

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWLRNLRVGIKLVAAFSVVAAIAAVVGFIGSVEIRRIQSDDRRLYEKITVPMHDLAEMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VAFQRVRINLRDAVEATDPAEQALYLDTIRKLREVITEHQDNFEKTILTDEGRTLFNEYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHH
EARKVYGGYIDNIMQLNSAKKVTEAKALLHGDAKKAALHYQELLSKLVDAKQAQAKLTAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNEHVASTSFTVMAVLSAVGVILAIGLGLLISRMITTPLSRAVDVANRLADGDLTVVVAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
TSTDETGRLLTAMQNMVRSLREMVTQTATISAGIASASSQLHATSEQIATGTEEVASQAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
TVATASEEMSATSQDIATNCHAAAGSAEQVAATTRQGFDVVRHTVDGIRDRGEKTRQNAQ
CCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVASLGDRSEQIGDIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAER
HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH
TTRATKEIGEMIRAIQQETKTAIVSMEEGVRGTERGAIEAAQLETALQQILNQVNEVSMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGQIATAAEEQTATTGEVTSNIQQITEVVHQTAQGAEETADAAAQLARQAQDLQALIGRF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLA
CCC
>Mature Secondary Structure
MQWLRNLRVGIKLVAAFSVVAAIAAVVGFIGSVEIRRIQSDDRRLYEKITVPMHDLAEMS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VAFQRVRINLRDAVEATDPAEQALYLDTIRKLREVITEHQDNFEKTILTDEGRTLFNEYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHH
EARKVYGGYIDNIMQLNSAKKVTEAKALLHGDAKKAALHYQELLSKLVDAKQAQAKLTAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNEHVASTSFTVMAVLSAVGVILAIGLGLLISRMITTPLSRAVDVANRLADGDLTVVVAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
TSTDETGRLLTAMQNMVRSLREMVTQTATISAGIASASSQLHATSEQIATGTEEVASQAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
TVATASEEMSATSQDIATNCHAAAGSAEQVAATTRQGFDVVRHTVDGIRDRGEKTRQNAQ
CCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IVASLGDRSEQIGDIVGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAER
HHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH
TTRATKEIGEMIRAIQQETKTAIVSMEEGVRGTERGAIEAAQLETALQQILNQVNEVSMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VGQIATAAEEQTATTGEVTSNIQQITEVVHQTAQGAEETADAAAQLARQAQDLQALIGRF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]