| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997591
Identifier: 39997591
GI number: 39997591
Start: 2745508
End: 2747223
Strand: Reverse
Name: 39997591
Synonym: GSU2496
Alternate gene names: NA
Gene position: 2747223-2745508 (Counterclockwise)
Preceding gene: 39997592
Following gene: 39997590
Centisome position: 72.03
GC content: 59.38
Gene sequence:
>1716_bases ATGAAGAAGTCTTTGGTTACGCTGATGGTAGCATGCATTGCCGCGGGTGCCCCGGTGGCGGGCTTTGCCGATTCGCCGGC AAAGCCGGAAAACGTGGAAGCCTCGCCGGCTCCGGCCGACGTGATGACGATCAGGGTGAAGGTGCCCCTGTTTTCGCCGC TGTTTGCCGAATTCCCCGTGGCAACGGTCAACGACGAGCCGATCACCGTCAACGACCTGAACGCCTCCCTTGAAACGGTA CACGAGGGGATGACGGAAGGAAAGCAGGCCCCCCGCCGGAACTTTACGGATATCCTCAACCGGATCATCACCTCCAAGCT CATCATCCAGGAAGGGCGCAACATCGGCCTGGACCAGCAGGAGCAGCCCAAGGAGATGATCGATACCTTCTCCCGCAAGC TCCTGCGCGAGCTGGTGCTCAAGGATCATGTGAAGGACATCCGGCCCGACCCCAAGGAGGTGGAGAAGCGCTACGGCCAG CTCAACGTGGAGTGGACCTTCTCCACCCTCACGTTCAAGAACGAGGAAGATGCCAAGAAGGCCCGCAAGGCCCTGGACAA AGGCACGTCCTTTGACGCGCTGGTGGCCGAGGAGGTCAAGGAGAAGCGCGCCGAGGCCAAGCAGAATGAGAAGCTGAAAT ACGAGCACATCCACCCCGATATCGTGAAGATCATCGATTCGCTGAAGCCCGGCGCCGTGGGCCCGGTGATCGACATGCAG AAGGGGGCCATGCTGTTCCGGCTCGATGCCGTGAAGCATTCCGACGATCCGAAACTGAAGGACAGGGCGGAGAAGGAAAC GCTCACCGCGGCCCGCTTCAAGGCCCTTGAAAAATTCCGGACCGAGCTGATCGAGAAGTATTTCAAGCAGGACAAGAAAC TGATCAAGTCGCTGGATTTCGAGAAGGACAAGGCAGGGTTCCTCAAGTTCCTGGAGGACAAGCGTCCCCTGGCCACCATC AAGGGGGAGAAGCCGGTGACCGTGGCCGACCTGGCCGAAGCGATCCGGATGAAGTTCTACCACGGGGTGGACATGGCCAT TGACCAGAAGAAGGTCAACAAGGCCAAGGACTCCCTGCTGTTCGAGATCCTGGCCACCCGGGCCATTGAGAAAGAGGGCC GCGACAAGGGCTTCGACAAGAAAAAGGAATACCTGGACAAGGTCACCGACTACCAGGAATCCGTGATCTTCGGGCATTTC GTGGAAAAGGTCATCCGCCCGGACGTGAAGGTGACCGAGGATGAGCTGAAGGCCTACTACGAGGCGCACAAGTCCGAGTA CTCCTACCCGATCATGGTGGTGCTGGACGGCATTGCCTTCAATGACCAGAACGCGGCCCAGTCCGCCGCGGAAAAGCTGC GCCAGGGGATGGATTTCAAATGGTTCAAGGAGAACGCCGAGGGCCACGTGGATGCCAAGGCCGCCGGGGTCCTCCAGTTC GAGGACGTGCCGGTCACCCTCAAGACCCTTCCCGAGGGGCTGAACAAGGTCATCACCGGGGCCCAGACCGGTGAATACCG GGTCTATTCGGACCCCAACGGCTTCACCTATGTCATCCTGGTCCGCAACGTGATCCCCGAACAGGTACAGTCCTTCCCCG AGGTCGAGGCCACAATCAGGAAGAACGTCCAGTCGGAACAGCTCAACAAGCTGGTCGTGGAGTGGGCGGACAAGCTGAGG AAGGCGTCCGACGTCAAGATTTTCGCCGAGTTTTAA
Upstream 100 bases:
>100_bases TGAGCCCGTAACGGAATTCGTTGTGTCAAACGTCCTGATGGCCGCCCGGAGCGGAGTGCCCGGTGCGGCCGCAACCTGAA TGCAGAGAAAGGGGAGTCTG
Downstream 100 bases:
>100_bases CGGACTGGAGGAGCTATGCGCACCGTGCATGCACAACGACAACTCTTATTCCTGGTGATGACCCTCCTGGTGGGGGGGCT CATTCTTCACCTGTCGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MKKSLVTLMVACIAAGAPVAGFADSPAKPENVEASPAPADVMTIRVKVPLFSPLFAEFPVATVNDEPITVNDLNASLETV HEGMTEGKQAPRRNFTDILNRIITSKLIIQEGRNIGLDQQEQPKEMIDTFSRKLLRELVLKDHVKDIRPDPKEVEKRYGQ LNVEWTFSTLTFKNEEDAKKARKALDKGTSFDALVAEEVKEKRAEAKQNEKLKYEHIHPDIVKIIDSLKPGAVGPVIDMQ KGAMLFRLDAVKHSDDPKLKDRAEKETLTAARFKALEKFRTELIEKYFKQDKKLIKSLDFEKDKAGFLKFLEDKRPLATI KGEKPVTVADLAEAIRMKFYHGVDMAIDQKKVNKAKDSLLFEILATRAIEKEGRDKGFDKKKEYLDKVTDYQESVIFGHF VEKVIRPDVKVTEDELKAYYEAHKSEYSYPIMVVLDGIAFNDQNAAQSAAEKLRQGMDFKWFKENAEGHVDAKAAGVLQF EDVPVTLKTLPEGLNKVITGAQTGEYRVYSDPNGFTYVILVRNVIPEQVQSFPEVEATIRKNVQSEQLNKLVVEWADKLR KASDVKIFAEF
Sequences:
>Translated_571_residues MKKSLVTLMVACIAAGAPVAGFADSPAKPENVEASPAPADVMTIRVKVPLFSPLFAEFPVATVNDEPITVNDLNASLETV HEGMTEGKQAPRRNFTDILNRIITSKLIIQEGRNIGLDQQEQPKEMIDTFSRKLLRELVLKDHVKDIRPDPKEVEKRYGQ LNVEWTFSTLTFKNEEDAKKARKALDKGTSFDALVAEEVKEKRAEAKQNEKLKYEHIHPDIVKIIDSLKPGAVGPVIDMQ KGAMLFRLDAVKHSDDPKLKDRAEKETLTAARFKALEKFRTELIEKYFKQDKKLIKSLDFEKDKAGFLKFLEDKRPLATI KGEKPVTVADLAEAIRMKFYHGVDMAIDQKKVNKAKDSLLFEILATRAIEKEGRDKGFDKKKEYLDKVTDYQESVIFGHF VEKVIRPDVKVTEDELKAYYEAHKSEYSYPIMVVLDGIAFNDQNAAQSAAEKLRQGMDFKWFKENAEGHVDAKAAGVLQF EDVPVTLKTLPEGLNKVITGAQTGEYRVYSDPNGFTYVILVRNVIPEQVQSFPEVEATIRKNVQSEQLNKLVVEWADKLR KASDVKIFAEF >Mature_571_residues MKKSLVTLMVACIAAGAPVAGFADSPAKPENVEASPAPADVMTIRVKVPLFSPLFAEFPVATVNDEPITVNDLNASLETV HEGMTEGKQAPRRNFTDILNRIITSKLIIQEGRNIGLDQQEQPKEMIDTFSRKLLRELVLKDHVKDIRPDPKEVEKRYGQ LNVEWTFSTLTFKNEEDAKKARKALDKGTSFDALVAEEVKEKRAEAKQNEKLKYEHIHPDIVKIIDSLKPGAVGPVIDMQ KGAMLFRLDAVKHSDDPKLKDRAEKETLTAARFKALEKFRTELIEKYFKQDKKLIKSLDFEKDKAGFLKFLEDKRPLATI KGEKPVTVADLAEAIRMKFYHGVDMAIDQKKVNKAKDSLLFEILATRAIEKEGRDKGFDKKKEYLDKVTDYQESVIFGHF VEKVIRPDVKVTEDELKAYYEAHKSEYSYPIMVVLDGIAFNDQNAAQSAAEKLRQGMDFKWFKENAEGHVDAKAAGVLQF EDVPVTLKTLPEGLNKVITGAQTGEYRVYSDPNGFTYVILVRNVIPEQVQSFPEVEATIRKNVQSEQLNKLVVEWADKLR KASDVKIFAEF
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64637; Mature: 64637
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLVTLMVACIAAGAPVAGFADSPAKPENVEASPAPADVMTIRVKVPLFSPLFAEFPV CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCC ATVNDEPITVNDLNASLETVHEGMTEGKQAPRRNFTDILNRIITSKLIIQEGRNIGLDQQ EECCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC EQPKEMIDTFSRKLLRELVLKDHVKDIRPDPKEVEKRYGQLNVEWTFSTLTFKNEEDAKK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEEEEEECCHHHHHH ARKALDKGTSFDALVAEEVKEKRAEAKQNEKLKYEHIHPDIVKIIDSLKPGAVGPVIDMQ HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCC KGAMLFRLDAVKHSDDPKLKDRAEKETLTAARFKALEKFRTELIEKYFKQDKKLIKSLDF CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EKDKAGFLKFLEDKRPLATIKGEKPVTVADLAEAIRMKFYHGVDMAIDQKKVNKAKDSLL CCCHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FEILATRAIEKEGRDKGFDKKKEYLDKVTDYQESVIFGHFVEKVIRPDVKVTEDELKAYY HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EAHKSEYSYPIMVVLDGIAFNDQNAAQSAAEKLRQGMDFKWFKENAEGHVDAKAAGVLQF HHHHCCCCCCEEEEEECCEECCCHHHHHHHHHHHHCCCCEEHHCCCCCCCCHHHHCEEEE EDVPVTLKTLPEGLNKVITGAQTGEYRVYSDPNGFTYVILVRNVIPEQVQSFPEVEATIR CCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCHHHHHHHH KNVQSEQLNKLVVEWADKLRKASDVKIFAEF HCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MKKSLVTLMVACIAAGAPVAGFADSPAKPENVEASPAPADVMTIRVKVPLFSPLFAEFPV CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCC ATVNDEPITVNDLNASLETVHEGMTEGKQAPRRNFTDILNRIITSKLIIQEGRNIGLDQQ EECCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC EQPKEMIDTFSRKLLRELVLKDHVKDIRPDPKEVEKRYGQLNVEWTFSTLTFKNEEDAKK CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEEEEEECCHHHHHH ARKALDKGTSFDALVAEEVKEKRAEAKQNEKLKYEHIHPDIVKIIDSLKPGAVGPVIDMQ HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCCCCCCCCCC KGAMLFRLDAVKHSDDPKLKDRAEKETLTAARFKALEKFRTELIEKYFKQDKKLIKSLDF CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EKDKAGFLKFLEDKRPLATIKGEKPVTVADLAEAIRMKFYHGVDMAIDQKKVNKAKDSLL CCCHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH FEILATRAIEKEGRDKGFDKKKEYLDKVTDYQESVIFGHFVEKVIRPDVKVTEDELKAYY HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EAHKSEYSYPIMVVLDGIAFNDQNAAQSAAEKLRQGMDFKWFKENAEGHVDAKAAGVLQF HHHHCCCCCCEEEEEECCEECCCHHHHHHHHHHHHCCCCEEHHCCCCCCCCHHHHCEEEE EDVPVTLKTLPEGLNKVITGAQTGEYRVYSDPNGFTYVILVRNVIPEQVQSFPEVEATIR CCCCEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCHHHHHHHH KNVQSEQLNKLVVEWADKLRKASDVKIFAEF HCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA