| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997590
Identifier: 39997590
GI number: 39997590
Start: 2743510
End: 2745450
Strand: Reverse
Name: 39997590
Synonym: GSU2495
Alternate gene names: NA
Gene position: 2745450-2743510 (Counterclockwise)
Preceding gene: 39997591
Following gene: 39997589
Centisome position: 71.98
GC content: 63.88
Gene sequence:
>1941_bases ATGACCCTCCTGGTGGGGGGGCTCATTCTTCACCTGTCGGAGAGCCCGGCGCTGGCGGCGAAGAAGTTCGCCCGCAAGGA ATGCGTCGACTGTCATGGCAAGTTCAATGACAAGTACCTCTCCATGAAGTACATCCACACCATCGTCAAGGAGCAGAAGT GCGAGGACTGTCACCTGCGCCACGGCATCGTGCCGAAGCTGCTGCTCAAGAAGGACGGCAACCAGCTCTGCTTCGACTGT CACGGCCGGGACAAGATCGGCCTGGACAAGCCCAAGGTGCACACACCCCTGCGCCAGGGGAAATGTACCCTCTGCCACAA CCCCCACGCCTCCACCACCCCGCACCTGTTGAAGGGTGACGGGCCGGAGTCCTGCTACGGCTGCCACAAGAAGGAGGACT ACGAGAAGGGGACCATCCACGGCGCCATCACGAAAAAAGGCTGCGGCTCCTGCCACGCGGCCCATAGCTCCACCGAGGAC AACCTCCTCAGGGAAAAGGAGCCGAAGATCTGTCTCGGCTGCCACGACAGCGGCGCCGGCAGCTTCAAGAAGGCCCACGG CGGCTATCCGGTGGAAAGCAAGCGCTGCACTATCTGCCACAACCCCCACTCGGCCACCGGCAAGAAGCTCCTCCGCTCCA GCGCCCATAACCCCGTTGCCACGGGCGGCTGTGACGGCTGCCACAATCCGGCCGGCGGGCCCGAGCCCTTCGGAGTGACC CAGAAGGGGAGCGAACTCTGCTACCAGTGCCACGATGCGGCCATGCTCAAGGGGACCGGCGGCGTGGCCGAGCACGCGCC GTTCAAGAGCGGCGACTGCCTCTCCTGTCACCGGGCCCACACCTCCGAGTTCGCGAAGCTGCTCACGGCCGACGGCAACA ACCTCTGCTTCGGGTGCCACCAGGACAAGAACCTGCGCGTTGCCGTGCCCCACAAGGTCATCACCGGCGACAAGAAGGGA TGCCTCTCCTGCCACCGGCCCCATGCCGCCCCCAACAAGGGACTGCTCACCCTGGCCGGCTCGGATCTCTGCTACTCGTG CCATGCCAAGACCAAGGAAGGGCTCAAGAACAAGGTTCAGCACGTGCCCTTCAACGGCGGCGACTGCAGCTCCTGCCATG ATCCCCACGGCACCAACTTCGCCGCCATGCTCAAGGAGCGGGCCGATACGGTCTGCTACGGCTGCCACACCGATGCCGAG ACCAAATTCAAGAAGACCTTCACCCACAAGCCGGTCATGAACGCCGACTGCGTGTCGTGCCACGGCGCCCACGGCTCGGC CGAAAAGAACCTGCTCAAGAATACCGTGCCGCAGCTCTGCGCACCCTGCCACGCGGACCTGATGAAGGCCGAGTCGGGCG GCTCCAGTCACATGCCGTTCAACGGGGGCCAGTGCCTCACCTGCCACGATTCCCACGGCAGCAACGTGCGGGGGATGATC GTGGACAACGAGGCGAAGCTGTGCTTCGGCTGCCACAAGTCGCTGGAGCAGGGCGACAAGGCCTCCAAGAGCTCCCATGC CCCGTTCCGGGGAGGGGACTGCACCAAGTGCCACAGCCCCCACAAGGCGAAGCTCAACAAGCTGCTGCTGGCCCAGGGGA CCGACCTCTGCGTGTCCTGCCACAAGGGGACCAAGGAGCGGTTCGCCAGCGAGAAGATCCACACGCCTGCGGAGCAGGAC TGCCAGACCTGCCACAAGCCCCACAATTCGGGCCAGCCGTCGCTGCTTACCGAACAGCTCGTGGCCCTGTGCGGCCAGTG CCACTCCTACGACCGTAAGCCGTTTGCGGACGCTCACCTGGGGATCTCCGCCACGGTGATGAACTGCATGAACTGCCACG ATCCGCACAGTTCCAAGGACCCGAAGTTCTTCAAGAAGATGGTGCACGCACCCTTCGCTTCGCGTTCGTGCTCTGATTGC CACGTGACAGGAAAACAGTAA
Upstream 100 bases:
>100_bases GCTGAGGAAGGCGTCCGACGTCAAGATTTTCGCCGAGTTTTAACGGACTGGAGGAGCTATGCGCACCGTGCATGCACAAC GACAACTCTTATTCCTGGTG
Downstream 100 bases:
>100_bases AAGGAGCTCCCATGCACGCATATCGCACATATCTTTACACGTTCTGCGCGGTGCTTGTCATTCTGGGCGCATCCTTTGCG CTCGCCCAGGACAACGCACT
Product: cytochrome C
Products: NA
Alternate protein names: Decaheme C-Type Cytochrome DmsE Family; Decaheme Cytochrome C MtrA; Multiheme Cytochrome; Decaheme Cytochrome C; Nitrate/TMAO Reductase; Multiheme C-Type Cytochrome; Doubled CXXCH Domain-Containing Protein; Cytochrome C; Decaheme Cytochrome C MtrD; Multiheme Cytochrome Family Protein; Double CXXCH Motif-Containing Protein; Cytochrome C-Type Protein NrfB
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MTLLVGGLILHLSESPALAAKKFARKECVDCHGKFNDKYLSMKYIHTIVKEQKCEDCHLRHGIVPKLLLKKDGNQLCFDC HGRDKIGLDKPKVHTPLRQGKCTLCHNPHASTTPHLLKGDGPESCYGCHKKEDYEKGTIHGAITKKGCGSCHAAHSSTED NLLREKEPKICLGCHDSGAGSFKKAHGGYPVESKRCTICHNPHSATGKKLLRSSAHNPVATGGCDGCHNPAGGPEPFGVT QKGSELCYQCHDAAMLKGTGGVAEHAPFKSGDCLSCHRAHTSEFAKLLTADGNNLCFGCHQDKNLRVAVPHKVITGDKKG CLSCHRPHAAPNKGLLTLAGSDLCYSCHAKTKEGLKNKVQHVPFNGGDCSSCHDPHGTNFAAMLKERADTVCYGCHTDAE TKFKKTFTHKPVMNADCVSCHGAHGSAEKNLLKNTVPQLCAPCHADLMKAESGGSSHMPFNGGQCLTCHDSHGSNVRGMI VDNEAKLCFGCHKSLEQGDKASKSSHAPFRGGDCTKCHSPHKAKLNKLLLAQGTDLCVSCHKGTKERFASEKIHTPAEQD CQTCHKPHNSGQPSLLTEQLVALCGQCHSYDRKPFADAHLGISATVMNCMNCHDPHSSKDPKFFKKMVHAPFASRSCSDC HVTGKQ
Sequences:
>Translated_646_residues MTLLVGGLILHLSESPALAAKKFARKECVDCHGKFNDKYLSMKYIHTIVKEQKCEDCHLRHGIVPKLLLKKDGNQLCFDC HGRDKIGLDKPKVHTPLRQGKCTLCHNPHASTTPHLLKGDGPESCYGCHKKEDYEKGTIHGAITKKGCGSCHAAHSSTED NLLREKEPKICLGCHDSGAGSFKKAHGGYPVESKRCTICHNPHSATGKKLLRSSAHNPVATGGCDGCHNPAGGPEPFGVT QKGSELCYQCHDAAMLKGTGGVAEHAPFKSGDCLSCHRAHTSEFAKLLTADGNNLCFGCHQDKNLRVAVPHKVITGDKKG CLSCHRPHAAPNKGLLTLAGSDLCYSCHAKTKEGLKNKVQHVPFNGGDCSSCHDPHGTNFAAMLKERADTVCYGCHTDAE TKFKKTFTHKPVMNADCVSCHGAHGSAEKNLLKNTVPQLCAPCHADLMKAESGGSSHMPFNGGQCLTCHDSHGSNVRGMI VDNEAKLCFGCHKSLEQGDKASKSSHAPFRGGDCTKCHSPHKAKLNKLLLAQGTDLCVSCHKGTKERFASEKIHTPAEQD CQTCHKPHNSGQPSLLTEQLVALCGQCHSYDRKPFADAHLGISATVMNCMNCHDPHSSKDPKFFKKMVHAPFASRSCSDC HVTGKQ >Mature_645_residues TLLVGGLILHLSESPALAAKKFARKECVDCHGKFNDKYLSMKYIHTIVKEQKCEDCHLRHGIVPKLLLKKDGNQLCFDCH GRDKIGLDKPKVHTPLRQGKCTLCHNPHASTTPHLLKGDGPESCYGCHKKEDYEKGTIHGAITKKGCGSCHAAHSSTEDN LLREKEPKICLGCHDSGAGSFKKAHGGYPVESKRCTICHNPHSATGKKLLRSSAHNPVATGGCDGCHNPAGGPEPFGVTQ KGSELCYQCHDAAMLKGTGGVAEHAPFKSGDCLSCHRAHTSEFAKLLTADGNNLCFGCHQDKNLRVAVPHKVITGDKKGC LSCHRPHAAPNKGLLTLAGSDLCYSCHAKTKEGLKNKVQHVPFNGGDCSSCHDPHGTNFAAMLKERADTVCYGCHTDAET KFKKTFTHKPVMNADCVSCHGAHGSAEKNLLKNTVPQLCAPCHADLMKAESGGSSHMPFNGGQCLTCHDSHGSNVRGMIV DNEAKLCFGCHKSLEQGDKASKSSHAPFRGGDCTKCHSPHKAKLNKLLLAQGTDLCVSCHKGTKERFASEKIHTPAEQDC QTCHKPHNSGQPSLLTEQLVALCGQCHSYDRKPFADAHLGISATVMNCMNCHDPHSSKDPKFFKKMVHAPFASRSCSDCH VTGKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69690; Mature: 69559
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 8.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLVGGLILHLSESPALAAKKFARKECVDCHGKFNDKYLSMKYIHTIVKEQKCEDCHLR CEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHH HGIVPKLLLKKDGNQLCFDCHGRDKIGLDKPKVHTPLRQGKCTLCHNPHASTTPHLLKGD CCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCEECCC GPESCYGCHKKEDYEKGTIHGAITKKGCGSCHAAHSSTEDNLLREKEPKICLGCHDSGAG CCHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCHHHHHHHCCCCEEEECCCCCCC SFKKAHGGYPVESKRCTICHNPHSATGKKLLRSSAHNPVATGGCDGCHNPAGGPEPFGVT CCHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QKGSELCYQCHDAAMLKGTGGVAEHAPFKSGDCLSCHRAHTSEFAKLLTADGNNLCFGCH CCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC QDKNLRVAVPHKVITGDKKGCLSCHRPHAAPNKGLLTLAGSDLCYSCHAKTKEGLKNKVQ CCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHH HVPFNGGDCSSCHDPHGTNFAAMLKERADTVCYGCHTDAETKFKKTFTHKPVMNADCVSC CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHEE HGAHGSAEKNLLKNTVPQLCAPCHADLMKAESGGSSHMPFNGGQCLTCHDSHGSNVRGMI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEE VDNEAKLCFGCHKSLEQGDKASKSSHAPFRGGDCTKCHSPHKAKLNKLLLAQGTDLCVSC EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEC HKGTKERFASEKIHTPAEQDCQTCHKPHNSGQPSLLTEQLVALCGQCHSYDRKPFADAHL CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHC GISATVMNCMNCHDPHSSKDPKFFKKMVHAPFASRSCSDCHVTGKQ CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCC >Mature Secondary Structure TLLVGGLILHLSESPALAAKKFARKECVDCHGKFNDKYLSMKYIHTIVKEQKCEDCHLR EEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCHHHHH HGIVPKLLLKKDGNQLCFDCHGRDKIGLDKPKVHTPLRQGKCTLCHNPHASTTPHLLKGD CCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHCCCEEEECCCCCCCCCCEECCC GPESCYGCHKKEDYEKGTIHGAITKKGCGSCHAAHSSTEDNLLREKEPKICLGCHDSGAG CCHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCHHHHHHHCCCCEEEECCCCCCC SFKKAHGGYPVESKRCTICHNPHSATGKKLLRSSAHNPVATGGCDGCHNPAGGPEPFGVT CCHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QKGSELCYQCHDAAMLKGTGGVAEHAPFKSGDCLSCHRAHTSEFAKLLTADGNNLCFGCH CCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEC QDKNLRVAVPHKVITGDKKGCLSCHRPHAAPNKGLLTLAGSDLCYSCHAKTKEGLKNKVQ CCCCCEEECCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCHHHHHHHHHHHH HVPFNGGDCSSCHDPHGTNFAAMLKERADTVCYGCHTDAETKFKKTFTHKPVMNADCVSC CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCCCCCHHEE HGAHGSAEKNLLKNTVPQLCAPCHADLMKAESGGSSHMPFNGGQCLTCHDSHGSNVRGMI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEEEE VDNEAKLCFGCHKSLEQGDKASKSSHAPFRGGDCTKCHSPHKAKLNKLLLAQGTDLCVSC EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEC HKGTKERFASEKIHTPAEQDCQTCHKPHNSGQPSLLTEQLVALCGQCHSYDRKPFADAHL CCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHC GISATVMNCMNCHDPHSSKDPKFFKKMVHAPFASRSCSDCHVTGKQ CHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA