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The map label for this gene is 39997488

Identifier: 39997488

GI number: 39997488

Start: 2626478

End: 2627074

Strand: Reverse

Name: 39997488

Synonym: GSU2393

Alternate gene names: NA

Gene position: 2627074-2626478 (Counterclockwise)

Preceding gene: 39997489

Following gene: 39997487

Centisome position: 68.88

GC content: 49.58

Gene sequence:

>597_bases
ATGAGATTTTACACAAAAACTCACAAACACTACTGCGGAATCGATCTTCATGCGAAGAAAATGTTCCTCTGTATCCTGGA
TGCACAGGGCGAGGTGCTCCTGCACCGCAACATCTCAAGTTCGCCGGAGGCCTTTCTCAAAGCAGTCGCGCCTTTCCGTG
ATGGTTTGGTGGTCGGCGTGGAATGCATGTTTGCCTGGTACTGGCTTGCCGATCTCTGCCGTAAGGAAGGAATCGAATTT
GTCTTGGGTCATGCCCTTTACATGGGACATAAAAAGGGGACAGGCTACTTTTTTCGATCAATTTTTGGTCTGCCTCTTTC
CCGTCTTGTTGACTCTAATCCCAACTCCTTACATATCATATCTGCCCACAGATCGTTTCCGTATGGTGCTTGTCTGTTGA
CGCTCCGGCGGAGTCTTTCAATTTCGCTGCTGGTCATTGCGGTATCAACATACTGTGTCCAATTTGCTGGTAATGTGTTG
GGCAGGGCGGCAAGTATTCTTCGATTAGTTCCTGCTACCCGTTCTGGGTGTGAAGACCACTGCCAGTCCTTGGCGCTGGC
GGTCATTGTCGCTCTAACAGGATTGGCCTCGATATAG

Upstream 100 bases:

>100_bases
GTCTTGGCGCTGGATACTATGTAAGGCCCCCCTTGGGCATACGGATTTTTGCCGTATGCTGGACTTTGCGAGAACCCATT
CTCCAAAGGAGGCCTTACCC

Downstream 100 bases:

>100_bases
CGGACTACGGTCAGCAAGTGATCATCATCCTGAACTATGAAACTCTTGTACCGACCTTGCCAGACGTGACCACTCGTGCC
GTAATGACGATGGTAGCGGC

Product: ISGsu5, transposase, truncation

Products: NA

Alternate protein names: ISGsu4 Transposase; Arginyl-TRNA Synthetase Class Ic; ISGsu5 Transposase; Transposase Or Inactivated Derivative; ISGsu5 Transposase Truncation

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGVECMFAWYWLADLCRKEGIEF
VLGHALYMGHKKGTGYFFRSIFGLPLSRLVDSNPNSLHIISAHRSFPYGACLLTLRRSLSISLLVIAVSTYCVQFAGNVL
GRAASILRLVPATRSGCEDHCQSLALAVIVALTGLASI

Sequences:

>Translated_198_residues
MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGVECMFAWYWLADLCRKEGIEF
VLGHALYMGHKKGTGYFFRSIFGLPLSRLVDSNPNSLHIISAHRSFPYGACLLTLRRSLSISLLVIAVSTYCVQFAGNVL
GRAASILRLVPATRSGCEDHCQSLALAVIVALTGLASI
>Mature_198_residues
MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGVECMFAWYWLADLCRKEGIEF
VLGHALYMGHKKGTGYFFRSIFGLPLSRLVDSNPNSLHIISAHRSFPYGACLLTLRRSLSISLLVIAVSTYCVQFAGNVL
GRAASILRLVPATRSGCEDHCQSLALAVIVALTGLASI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21833; Mature: 21833

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS00327 BACTERIAL_OPSIN_RET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGV
CCCCCCCCCEECCCEEECCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHH
ECMFAWYWLADLCRKEGIEFVLGHALYMGHKKGTGYFFRSIFGLPLSRLVDSNPNSLHII
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEE
SAHRSFPYGACLLTLRRSLSISLLVIAVSTYCVQFAGNVLGRAASILRLVPATRSGCEDH
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
CQSLALAVIVALTGLASI
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGV
CCCCCCCCCEECCCEEECCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHH
ECMFAWYWLADLCRKEGIEFVLGHALYMGHKKGTGYFFRSIFGLPLSRLVDSNPNSLHII
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHCCCCCEEEEE
SAHRSFPYGACLLTLRRSLSISLLVIAVSTYCVQFAGNVLGRAASILRLVPATRSGCEDH
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
CQSLALAVIVALTGLASI
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA