| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is cbbZ [C]
Identifier: 39997290
GI number: 39997290
Start: 2404342
End: 2404995
Strand: Reverse
Name: cbbZ [C]
Synonym: GSU2192
Alternate gene names: 39997290
Gene position: 2404995-2404342 (Counterclockwise)
Preceding gene: 39997291
Following gene: 39997289
Centisome position: 63.05
GC content: 64.07
Gene sequence:
>654_bases GTGCCCCCTTCAATTGATCTTATCATCTTCGACCTTGATGGAACCCTTATCGATTCTCTCGACGATCTCACCGATGCCGT GAACCATATGCTCTCCGCGCTGGGGCGGGAGCGTCTCACCCGCGATGCCGTTCGCACCATGGTGGGGCAGGGGGCGCGGC GGCTGGTGGAGCGCGCCATGCCCGGCGGCGCCGCGGCAGAGATCGAGCGCGGGCTGGAGCTGTTTCTCGACTACAACCGG GAACACATCGCGGTGCGTACGGCCTTCTACCCGGGTGCTCTGGAGGCGCTGGCCCGGTTTCGCGGACAGGGAAAGCGGAT GGCGGTCATCTCCAACAAGAACGTCGATCTCTGTCGCAGCGTGCTCGTTGCCCTGGGGGCCGAGCAGTGGTTCGAGGAGA TCATGGGGGCGGACTCGCTTCCCGCGCGCAAGCCGTCACCGGAGCCTGTACTGAAGCTGTTGGCGGACTTTGGCGTGCCG CGGGAACGGGCCGTCATCATCGGCGACAGTATCAATGACGTGGCCGCCGGCAAAGGGGCGGGCGTTACCACCGTGGGGTG TACCTGGGGATATGGTGAACGGAGCGAAATTGCCGACGCCGACTATCTGGTCGACACCTATGGTGCCCTGGTGACTCTGC CGCTCTTTGTCTGA
Upstream 100 bases:
>100_bases CAAAGCCCGTCCGGCTGCGGACGGGCTTTTCTGTTGCGGTGGGGCACGGAAACCAATTATAGTCAGATGTTGAGCTGATA TCACATGACGGAGCCCGGCC
Downstream 100 bases:
>100_bases GCGTAGGAGTCGGATGATGCATCTGGCTAAGATTATTTTATTTTTGACGCCGCAATAAGTGGGTAAGTATATGTTTGGTT GGACCGGTACGATTCTGAAT
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGP; PGPase [H]
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPPSIDLIIFDLDGTLIDSLDDLTDAVNHMLSALGRERLTRDAVRTMVGQGARRLVERAMPGGAAAEIERGLELFLDYNR EHIAVRTAFYPGALEALARFRGQGKRMAVISNKNVDLCRSVLVALGAEQWFEEIMGADSLPARKPSPEPVLKLLADFGVP RERAVIIGDSINDVAAGKGAGVTTVGCTWGYGERSEIADADYLVDTYGALVTLPLFV
Sequences:
>Translated_217_residues MPPSIDLIIFDLDGTLIDSLDDLTDAVNHMLSALGRERLTRDAVRTMVGQGARRLVERAMPGGAAAEIERGLELFLDYNR EHIAVRTAFYPGALEALARFRGQGKRMAVISNKNVDLCRSVLVALGAEQWFEEIMGADSLPARKPSPEPVLKLLADFGVP RERAVIIGDSINDVAAGKGAGVTTVGCTWGYGERSEIADADYLVDTYGALVTLPLFV >Mature_216_residues PPSIDLIIFDLDGTLIDSLDDLTDAVNHMLSALGRERLTRDAVRTMVGQGARRLVERAMPGGAAAEIERGLELFLDYNRE HIAVRTAFYPGALEALARFRGQGKRMAVISNKNVDLCRSVLVALGAEQWFEEIMGADSLPARKPSPEPVLKLLADFGVPR ERAVIIGDSINDVAAGKGAGVTTVGCTWGYGERSEIADADYLVDTYGALVTLPLFV
Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1789787, Length=229, Percent_Identity=29.2576419213974, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR006346 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.18 [H]
Molecular weight: Translated: 23459; Mature: 23328
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSIDLIIFDLDGTLIDSLDDLTDAVNHMLSALGRERLTRDAVRTMVGQGARRLVERAM CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGGAAAEIERGLELFLDYNREHIAVRTAFYPGALEALARFRGQGKRMAVISNKNVDLCRS CCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHH VLVALGAEQWFEEIMGADSLPARKPSPEPVLKLLADFGVPRERAVIIGDSINDVAAGKGA HHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCC GVTTVGCTWGYGERSEIADADYLVDTYGALVTLPLFV CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPSIDLIIFDLDGTLIDSLDDLTDAVNHMLSALGRERLTRDAVRTMVGQGARRLVERAM CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGGAAAEIERGLELFLDYNREHIAVRTAFYPGALEALARFRGQGKRMAVISNKNVDLCRS CCCHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHCCCCEEEEEECCCHHHHHH VLVALGAEQWFEEIMGADSLPARKPSPEPVLKLLADFGVPRERAVIIGDSINDVAAGKGA HHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCHHHCCCCC GVTTVGCTWGYGERSEIADADYLVDTYGALVTLPLFV CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA