| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997288
Identifier: 39997288
GI number: 39997288
Start: 2401250
End: 2402416
Strand: Reverse
Name: 39997288
Synonym: GSU2190
Alternate gene names: NA
Gene position: 2402416-2401250 (Counterclockwise)
Preceding gene: 39997289
Following gene: 39997286
Centisome position: 62.99
GC content: 65.12
Gene sequence:
>1167_bases ATGCGCGACCAGGTGTCTGTCTACACGAACAAACTCATTGCCGACCGCTCGGCACATGCCCAAGGCATAGCCATAGCAGC CCAGGACGACGTCCTCATTGCCGGGGGTGCCCCTGACCTGGCCCGGCTTGCTGGAGACGTTCTGTCCCGGCTCACCTGCC TCGGCATGGTGGTGGCCTGCCCATCGCTCCCCTTTGCCGATTTCCTGGTGGCCCGCGCCCCGGCCGGGGAGTCGTGCATC GTGCCCCGTGACACGGAAACCCGGACCTTTCTGCACGATATCCCCTTTCTGCGCCGCAGCGACCTTGGCGCCGATCCCGC TCCCGTTATCGCCCGCCTCCTTGGCAGCCGCAAGGGAGTGGTCGTGGAAGGGGTAGGGATCGTGGCCAGCGGAGCCCTTA CCGTAGAACAGGCCTATATCAACTACTCCTCGGTATTTCATTCGACCTTCGTGAAGTATCTCCAGGATGTGCTTCACCAC GGCTTCATCCTGCCGGGGGAGGCGGAGGCATTTGCCGCGTTCCGCAGCCAGTGGCTCCGGCCGCTTACGGATGAAGGGCT CGCCTTCCGGTCCGGCCCCTTGGCGGAACGGGACGAGATCCTCGACGAAATCGCCACGGTGGGGCGCTACACGGTTGAAC GGGGGCTGGTGGATTCCTTCTTCGGCAACATTTCATGCCGTGCCGGCGAGGTGATCTACATCTCCCAGACCGCGGCGAGC CTGGATTCCCTGGCCGGCTGCATCGACCCGGTCCCCACGGACAATTCATCCACCTTCGGCATTACCGCCTCCAGCGAACT CCTGGCCCACCGGCGGATTTACGAGGCTACCGGCGCTGCGACCATTCTTCACGGTCACCCCAAGTTCGCGGTGATCATGA GCATGGAGTGCGCGGAAGAAGGGTGCGCCATTACCGACTGCTGGAAGGAGTGCGACCGGGTGCGGTTTCTCGGCGATACG CCGGTGGTGGCGGGCGAGATCGGCGCCGGCGGGCTTGCCAGGAGGGTGCCGCCGGCGATCGCGGGCCCGCGCAAGGCGGT GGTCTATGGCCACGGGGTCTTTACGGTGGGAGAGACGGACTTTGCCGACGCGTTCCGGGCCCTGGTGTCCGTGGAGAACT GGTGCCGCGGGGAATATTTTCGCCGGCTGGAAGAGCGGCTCGGGTGA
Upstream 100 bases:
>100_bases GAACCGATACGTGAGCAATGCTTATCTATCTGGTTGTTGAATAACAATTTTTGCTGGCCGGCATTGATTGTCGGTAGCAA CGAAATAAACGGGTAAGTAT
Downstream 100 bases:
>100_bases GCGGGCTCAGGATATCTGTCTGGGGAAGCTGGCGGTAAAGGTGGTGCCTTCGCGCTCGGTGCTCGTAAAGGTGATGGTAC CCTTCAGGTAGCGTTCGCCG
Product: class II aldolase and adducin N-terminal domain-containing protein
Products: NA
Alternate protein names: L-Fuculose Phosphate Aldolase; Class II Aldolase/Adducin-Like; Aldolase Domain-Containing Protein; Aldolase Class II; Aldolase Class II Protein
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVACPSLPFADFLVARAPAGESCI VPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGVVVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHH GFILPGEAEAFAAFRSQWLRPLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEEGCAITDCWKECDRVRFLGDT PVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETDFADAFRALVSVENWCRGEYFRRLEERLG
Sequences:
>Translated_388_residues MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVACPSLPFADFLVARAPAGESCI VPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGVVVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHH GFILPGEAEAFAAFRSQWLRPLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEEGCAITDCWKECDRVRFLGDT PVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETDFADAFRALVSVENWCRGEYFRRLEERLG >Mature_388_residues MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVACPSLPFADFLVARAPAGESCI VPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGVVVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHH GFILPGEAEAFAAFRSQWLRPLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEEGCAITDCWKECDRVRFLGDT PVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETDFADAFRALVSVENWCRGEYFRRLEERLG
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41633; Mature: 41633
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVAC CCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC PSLPFADFLVARAPAGESCIVPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGV CCCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCE VVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHHGFILPGEAEAFAAFRSQWLR EEECCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHCC PLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECHHHH LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEE HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHC GCAITDCWKECDRVRFLGDTPVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETD CCCHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEECEEEEECCCH FADAFRALVSVENWCRGEYFRRLEERLG HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRDQVSVYTNKLIADRSAHAQGIAIAAQDDVLIAGGAPDLARLAGDVLSRLTCLGMVVAC CCCCHHHHHHHHHHCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHC PSLPFADFLVARAPAGESCIVPRDTETRTFLHDIPFLRRSDLGADPAPVIARLLGSRKGV CCCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCE VVEGVGIVASGALTVEQAYINYSSVFHSTFVKYLQDVLHHGFILPGEAEAFAAFRSQWLR EEECCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHCC PLTDEGLAFRSGPLAERDEILDEIATVGRYTVERGLVDSFFGNISCRAGEVIYISQTAAS CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEECHHHH LDSLAGCIDPVPTDNSSTFGITASSELLAHRRIYEATGAATILHGHPKFAVIMSMECAEE HHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHC GCAITDCWKECDRVRFLGDTPVVAGEIGAGGLARRVPPAIAGPRKAVVYGHGVFTVGETD CCCHHHHHHHHHHEEECCCCCEEEECCCCCCHHHHCCCCCCCCCEEEEEECEEEEECCCH FADAFRALVSVENWCRGEYFRRLEERLG HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA