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The map label for this gene is 39997270

Identifier: 39997270

GI number: 39997270

Start: 2384455

End: 2385054

Strand: Reverse

Name: 39997270

Synonym: GSU2172

Alternate gene names: NA

Gene position: 2385054-2384455 (Counterclockwise)

Preceding gene: 39997278

Following gene: 39997267

Centisome position: 62.53

GC content: 54.5

Gene sequence:

>600_bases
ATGAAATCGCTCAGCATCACCGTACTGGCGTTGATTCTTCCGCTAACAGCCCATGCCGCAGAGATTCGCCAGCGGCCATT
CAGTTATTCGCTCGATGCAGTTGCGGCTAAACAGGATGACCAGTTCGTCGTCTGTTCCGACTGCCCAGATCACAGGCTTT
CCCTCCTGCCGGTGAAACCCATGCTTGCCATGCGACTCTCCGACCCGGTCAAGCCGGAGCCGCAACTTGCCCTTGAGACA
AAGCCTGTCCAGTCATCCACCCACGGCGCCATCGAGACAGAAATACAGCTCACAAGCGTGCAGTTCGACTTCGACAGCGA
ACAGCTGTCACGTCACGAGCGATTGAGATTCGATGGGCTGTTGGCGGGATTGACGAAGCAGGGCATGTTCGGGCTGAAGG
GCTACACCTGCACGATTGGGACGGATGACTACAACGAGAGGTTGTCGATCAGGAGAGCGAATCATGTAGCAGGGATAATG
AAATCTAATGGTTTTAATGTGGTGACTGTGGAGGGAAAAGGCAAGTGCTGCCCTGTTTCGACCGACAAACGCCTGAACCG
GCGTGTGGAAATCGTAGAACATCGAAAGGAGGAGAAGTGA

Upstream 100 bases:

>100_bases
CCAGATATGGCGCTGCTCGGATCAGTGACGACGCCTGAACCTGCCCCCCCTATAGATTATGTGAATGAAGCACACTCCTT
CAGGAGGCCTGTTCCCCTTG

Downstream 100 bases:

>100_bases
AGATCATTAACGGTAGGACCATGATGGTTGGCGGATTGATGCTGCTTCTTGTCGCGGTCGCAGGGTTCTCCATGGCGAAC
GACGACGTGAAGACGGAGAA

Product: OmpA domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Domain-Containing Protein; OmpA Family Outer Membrane Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKSLSITVLALILPLTAHAAEIRQRPFSYSLDAVAAKQDDQFVVCSDCPDHRLSLLPVKPMLAMRLSDPVKPEPQLALET
KPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGLLAGLTKQGMFGLKGYTCTIGTDDYNERLSIRRANHVAGIM
KSNGFNVVTVEGKGKCCPVSTDKRLNRRVEIVEHRKEEK

Sequences:

>Translated_199_residues
MKSLSITVLALILPLTAHAAEIRQRPFSYSLDAVAAKQDDQFVVCSDCPDHRLSLLPVKPMLAMRLSDPVKPEPQLALET
KPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGLLAGLTKQGMFGLKGYTCTIGTDDYNERLSIRRANHVAGIM
KSNGFNVVTVEGKGKCCPVSTDKRLNRRVEIVEHRKEEK
>Mature_199_residues
MKSLSITVLALILPLTAHAAEIRQRPFSYSLDAVAAKQDDQFVVCSDCPDHRLSLLPVKPMLAMRLSDPVKPEPQLALET
KPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGLLAGLTKQGMFGLKGYTCTIGTDDYNERLSIRRANHVAGIM
KSNGFNVVTVEGKGKCCPVSTDKRLNRRVEIVEHRKEEK

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22206; Mature: 22206

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLSITVLALILPLTAHAAEIRQRPFSYSLDAVAAKQDDQFVVCSDCPDHRLSLLPVKP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCCH
MLAMRLSDPVKPEPQLALETKPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHH
LAGLTKQGMFGLKGYTCTIGTDDYNERLSIRRANHVAGIMKSNGFNVVTVEGKGKCCPVS
HHHHHHCCCCCCCCEEEEECCCCCCHHEEEEEHHHHEEEEECCCEEEEEECCCCCCCCCC
TDKRLNRRVEIVEHRKEEK
CCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSLSITVLALILPLTAHAAEIRQRPFSYSLDAVAAKQDDQFVVCSDCPDHRLSLLPVKP
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCCH
MLAMRLSDPVKPEPQLALETKPVQSSTHGAIETEIQLTSVQFDFDSEQLSRHERLRFDGL
HHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHH
LAGLTKQGMFGLKGYTCTIGTDDYNERLSIRRANHVAGIMKSNGFNVVTVEGKGKCCPVS
HHHHHHCCCCCCCCEEEEECCCCCCHHEEEEEHHHHEEEEECCCEEEEEECCCCCCCCCC
TDKRLNRRVEIVEHRKEEK
CCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA