| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39997207
Identifier: 39997207
GI number: 39997207
Start: 2329537
End: 2330136
Strand: Reverse
Name: 39997207
Synonym: GSU2109
Alternate gene names: NA
Gene position: 2330136-2329537 (Counterclockwise)
Preceding gene: 39997208
Following gene: 39997206
Centisome position: 61.09
GC content: 51.17
Gene sequence:
>600_bases GTGTCATCTTTGGAACAGAATCTTGATCTATTACGCCAGGATCTGGTCGCTGAGCCAATGCGGATTGCGGCCCACAGCGA TATGCCCTTCGCGATTTTCCGCTACTCTCCGGAAGAAGAGTTCCAGCTGCGCAAGCGTCTCCGTTTGCTGGCCTATTCCC TTTCTGAGAATCATGGCCGCAAAGTAGCGTTCCTCTCAATCTCACGACTTGTGTGGGGTATCGTGCGCCGGTTCGAGGGT ACGGACTATCTCTTCAAAACTGAGTCCATCAGGGGATTCCAAGCTGCTGAGGAACATATAAATCGTCTTCTCAGTTCCGA AGACTACCGTCCTATAGCCGATGAAGTACTGGAACGTATCAAAGGGTTCGATCACGACCGTGATATCGTTTTCCTGGTCC GTGCCGGCGGCTTCGCTCCATTTATCTATCGCTGCTCTAGTCTTCTCGATGGGCTGCATCGCAGGACAAAAGTGCCGGTC ATTCTTTTTTATCCGGGGAGCGCTGAGGCTGGGACGGATCTGAAATTTTTTGACCTCCCTTCGGAGGCTAATCTCGGCGT GTACAACTATCGGGTCAAAATATACGGAGTGGATAAATGA
Upstream 100 bases:
>100_bases CTTTTTTTCGAGGCACACCAGCATGGCTGGTTGCACTATCAGGCGGCTGGTCGTGTCCACCGGATAGAGTTTCCGACAAA CGACTTCAAGGACTACATAC
Downstream 100 bases:
>100_bases ACAGGATTGCTGATGTCTTTGAAAGACCCATCGATCGTACCATCGAAGAGGTCATCAAAGTTGACCAGGCGAACGAGGCT ACTGTCCAAAATGAGCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSSLEQNLDLLRQDLVAEPMRIAAHSDMPFAIFRYSPEEEFQLRKRLRLLAYSLSENHGRKVAFLSISRLVWGIVRRFEG TDYLFKTESIRGFQAAEEHINRLLSSEDYRPIADEVLERIKGFDHDRDIVFLVRAGGFAPFIYRCSSLLDGLHRRTKVPV ILFYPGSAEAGTDLKFFDLPSEANLGVYNYRVKIYGVDK
Sequences:
>Translated_199_residues MSSLEQNLDLLRQDLVAEPMRIAAHSDMPFAIFRYSPEEEFQLRKRLRLLAYSLSENHGRKVAFLSISRLVWGIVRRFEG TDYLFKTESIRGFQAAEEHINRLLSSEDYRPIADEVLERIKGFDHDRDIVFLVRAGGFAPFIYRCSSLLDGLHRRTKVPV ILFYPGSAEAGTDLKFFDLPSEANLGVYNYRVKIYGVDK >Mature_198_residues SSLEQNLDLLRQDLVAEPMRIAAHSDMPFAIFRYSPEEEFQLRKRLRLLAYSLSENHGRKVAFLSISRLVWGIVRRFEGT DYLFKTESIRGFQAAEEHINRLLSSEDYRPIADEVLERIKGFDHDRDIVFLVRAGGFAPFIYRCSSLLDGLHRRTKVPVI LFYPGSAEAGTDLKFFDLPSEANLGVYNYRVKIYGVDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23012; Mature: 22880
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLEQNLDLLRQDLVAEPMRIAAHSDMPFAIFRYSPEEEFQLRKRLRLLAYSLSENHGR CCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC KVAFLSISRLVWGIVRRFEGTDYLFKTESIRGFQAAEEHINRLLSSEDYRPIADEVLERI EEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH KGFDHDRDIVFLVRAGGFAPFIYRCSSLLDGLHRRTKVPVILFYPGSAEAGTDLKFFDLP HCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECC SEANLGVYNYRVKIYGVDK CCCCCCEEEEEEEEEECCC >Mature Secondary Structure SSLEQNLDLLRQDLVAEPMRIAAHSDMPFAIFRYSPEEEFQLRKRLRLLAYSLSENHGR CHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCC KVAFLSISRLVWGIVRRFEGTDYLFKTESIRGFQAAEEHINRLLSSEDYRPIADEVLERI EEEEHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH KGFDHDRDIVFLVRAGGFAPFIYRCSSLLDGLHRRTKVPVILFYPGSAEAGTDLKFFDLP HCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECC SEANLGVYNYRVKIYGVDK CCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA