Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is 39997135

Identifier: 39997135

GI number: 39997135

Start: 2228420

End: 2228905

Strand: Reverse

Name: 39997135

Synonym: GSU2037

Alternate gene names: NA

Gene position: 2228905-2228420 (Counterclockwise)

Preceding gene: 39997136

Following gene: 39997134

Centisome position: 58.44

GC content: 55.14

Gene sequence:

>486_bases
ATGAGACAGGGCGGCTTCTCTCTGGTTGAACTGGTTGTCATCATCGGGATCATCGGGATACTTATCGCCATCGGTACCCT
CGATTACGGTAATTGGTCGCGGAAATACAATGCGGAAGCCCAGATGAAGACAATGTACGCAGACTTCGCCTCTGCCAAGC
TGGATGCGCTCCACAGCAAGCGCCAGTACCAAATAACCCTTGGGTCCAGCCAGTATGTAATCAGAAACTACTCAAGCGCC
TTCGACGCTACGGGGACGGTAACCCAGACAAAAACACTCAAAACCCCCGTGACCTGGAGCCATGACAACATCATAACTTT
TGATACGCGCGGGTTTACGCCGCTGTCATCCGCCCGGACCGTCTGCCTTGCCTCCAGCGGCGCAACGATCGTGGACTGTG
TCATCGTCAGTCAGACCCGAATCGATTTGGGACAAAAGATCAACCCAGGAGGAGAGTGCGCCAGTGCGAACTGCCGGCCC
CGGTGA

Upstream 100 bases:

>100_bases
GCCGAGCGGCAAGGGGTGCCGCCGCGCAACAAGCCGACCATCGTCACCAATGCCAACATCAAGCCTCAGAAGCGTATCAT
CCACATCAGGGAGAAGTGAT

Downstream 100 bases:

>100_bases
TAAAGGATTTACCCTGATAGAGGTTCTCGTCGCGACGGTCATCATCCTGGTGGGCCTGCTGGGGCTGCTCCAGGCGGTGA
ACGTCTCCATGGAGCACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRQGGFSLVELVVIIGIIGILIAIGTLDYGNWSRKYNAEAQMKTMYADFASAKLDALHSKRQYQITLGSSQYVIRNYSSA
FDATGTVTQTKTLKTPVTWSHDNIITFDTRGFTPLSSARTVCLASSGATIVDCVIVSQTRIDLGQKINPGGECASANCRP
R

Sequences:

>Translated_161_residues
MRQGGFSLVELVVIIGIIGILIAIGTLDYGNWSRKYNAEAQMKTMYADFASAKLDALHSKRQYQITLGSSQYVIRNYSSA
FDATGTVTQTKTLKTPVTWSHDNIITFDTRGFTPLSSARTVCLASSGATIVDCVIVSQTRIDLGQKINPGGECASANCRP
R
>Mature_161_residues
MRQGGFSLVELVVIIGIIGILIAIGTLDYGNWSRKYNAEAQMKTMYADFASAKLDALHSKRQYQITLGSSQYVIRNYSSA
FDATGTVTQTKTLKTPVTWSHDNIITFDTRGFTPLSSARTVCLASSGATIVDCVIVSQTRIDLGQKINPGGECASANCRP
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17489; Mature: 17489

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQGGFSLVELVVIIGIIGILIAIGTLDYGNWSRKYNAEAQMKTMYADFASAKLDALHSK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RQYQITLGSSQYVIRNYSSAFDATGTVTQTKTLKTPVTWSHDNIITFDTRGFTPLSSART
CEEEEEECCCCEEEECCCCCCCCCCCEEECEEECCCEEECCCCEEEECCCCCCCCCCCCE
VCLASSGATIVDCVIVSQTRIDLGQKINPGGECASANCRPR
EEEECCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRQGGFSLVELVVIIGIIGILIAIGTLDYGNWSRKYNAEAQMKTMYADFASAKLDALHSK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
RQYQITLGSSQYVIRNYSSAFDATGTVTQTKTLKTPVTWSHDNIITFDTRGFTPLSSART
CEEEEEECCCCEEEECCCCCCCCCCCEEECEEECCCEEECCCCEEEECCCCCCCCCCCCE
VCLASSGATIVDCVIVSQTRIDLGQKINPGGECASANCRPR
EEEECCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA