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The map label for this gene is 39997128

Identifier: 39997128

GI number: 39997128

Start: 2223192

End: 2223788

Strand: Reverse

Name: 39997128

Synonym: GSU2030

Alternate gene names: NA

Gene position: 2223788-2223192 (Counterclockwise)

Preceding gene: 39997129

Following gene: 39997127

Centisome position: 58.3

GC content: 53.6

Gene sequence:

>597_bases
ATGGACGCGAGAATAGAAAAACTGCTCAAGCTCCCCAATAAACAGAAGCTAGCTCTCCTTGCGGCGATTCTTGTGGTTGA
AGGGGCAGCCCTGTATTGGGGCCTGTATGCCCCCCGCCAGAAGGAGCTTACGGCACTGCGCGGAAAGCTTGAAAAACTCC
AGACCGAGGTCCAGGAAAAGACCCGGATCGCCAACAACCTGCCCAAGCTGAAAAAGGAGTATCAGCAACTGCAGAAGGAT
CTGGAGAACGCCCTAACCGAGTTGCCCAACCAGAAGGAGATCCCCTCGCTGCTCACGGGGATTACCAGCGTAGGCAAAGG
AGCCGGTCTCGATTTTCTCCTCTTCAGGCCCAAGGGTGAAGTGCCCAAGGACTTCTATGCCGAAGTGCCGGTCGATATCT
CTGTATCGGGATCGTTCTACGGAGTGGCGAATTTCTTTACCGCCGTCGGTAACCTGCCGAGGATCGTCAACATTACAAAC
GTATCGTTCACTGACATCAAGCCCGTGGGTGGCAAGACCACTGTCAAGGTCAACTGTCTGGCCACGACCTTCCGCTTCAT
CGAAAAGAAAGAGACCAAGGATGACAAGAAGAAATAG

Upstream 100 bases:

>100_bases
GAGCTCACCTGTGTCATAAAGGCTCTGAAAAAAGAAGAGCCCGCGCCGGCAAAGAAAAAGTAAGGCCATTGGCCCCGGAA
AAAATTCTCAAGGACTCCCC

Downstream 100 bases:

>100_bases
CATACCGATTCTTGCCGTTTTGGTGGCTCTCACCTTTGTCTCGGCCGGCTGCGGAAAGAAGGAGCAGGCGCCTTCCCCTC
CACCACCTCCTCAAAAGGCA

Product: type IV pilus biogenesis protein PilO

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilO; Type 4 Fimbrial Biogenesis Protein PilO; Fimbrial Assembly Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Type IV Pilus Assembly Protein PilO; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilo Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbriae Biogenesis-Related Fusion Protein; Fimbrial Type-IV Assembly Protein PilO; Tfp Pilus Assembly Protein PilO-Like Protein; Fimbrial Assembly Protein; Pili Assembly Protein PilO; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein; Pilus Assembly Protein PilO-Like; Pili Assembly Protein

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDARIEKLLKLPNKQKLALLAAILVVEGAALYWGLYAPRQKELTALRGKLEKLQTEVQEKTRIANNLPKLKKEYQQLQKD
LENALTELPNQKEIPSLLTGITSVGKGAGLDFLLFRPKGEVPKDFYAEVPVDISVSGSFYGVANFFTAVGNLPRIVNITN
VSFTDIKPVGGKTTVKVNCLATTFRFIEKKETKDDKKK

Sequences:

>Translated_198_residues
MDARIEKLLKLPNKQKLALLAAILVVEGAALYWGLYAPRQKELTALRGKLEKLQTEVQEKTRIANNLPKLKKEYQQLQKD
LENALTELPNQKEIPSLLTGITSVGKGAGLDFLLFRPKGEVPKDFYAEVPVDISVSGSFYGVANFFTAVGNLPRIVNITN
VSFTDIKPVGGKTTVKVNCLATTFRFIEKKETKDDKKK
>Mature_198_residues
MDARIEKLLKLPNKQKLALLAAILVVEGAALYWGLYAPRQKELTALRGKLEKLQTEVQEKTRIANNLPKLKKEYQQLQKD
LENALTELPNQKEIPSLLTGITSVGKGAGLDFLLFRPKGEVPKDFYAEVPVDISVSGSFYGVANFFTAVGNLPRIVNITN
VSFTDIKPVGGKTTVKVNCLATTFRFIEKKETKDDKKK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22049; Mature: 22049

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDARIEKLLKLPNKQKLALLAAILVVEGAALYWGLYAPRQKELTALRGKLEKLQTEVQEK
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TRIANNLPKLKKEYQQLQKDLENALTELPNQKEIPSLLTGITSVGKGAGLDFLLFRPKGE
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCC
VPKDFYAEVPVDISVSGSFYGVANFFTAVGNLPRIVNITNVSFTDIKPVGGKTTVKVNCL
CCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEHHH
ATTFRFIEKKETKDDKKK
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDARIEKLLKLPNKQKLALLAAILVVEGAALYWGLYAPRQKELTALRGKLEKLQTEVQEK
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TRIANNLPKLKKEYQQLQKDLENALTELPNQKEIPSLLTGITSVGKGAGLDFLLFRPKGE
HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCC
VPKDFYAEVPVDISVSGSFYGVANFFTAVGNLPRIVNITNVSFTDIKPVGGKTTVKVNCL
CCHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEHHH
ATTFRFIEKKETKDDKKK
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA