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The map label for this gene is perM [C]

Identifier: 39997096

GI number: 39997096

Start: 2190339

End: 2191451

Strand: Reverse

Name: perM [C]

Synonym: GSU1998

Alternate gene names: 39997096

Gene position: 2191451-2190339 (Counterclockwise)

Preceding gene: 39997097

Following gene: 39997095

Centisome position: 57.46

GC content: 62.17

Gene sequence:

>1113_bases
GTGGTCTCCCGGACCGGCCGTACTCATCTCCCCCTGGTTGATTCCTTGAAAGAAAAACTACCCTACATCCTGTGCGGGCT
CCTGGCCCTGGCGGGTGTTCTCCTCGTCTGGTCCCTCGGCTCGACCTTTCTACCGGTGCTCCTGGCCCTGATTCTTGCCT
ACGTGCTGAATCCGCTGGTGACGTGGCTGGAGGCCAGGCGGGTTCCGCGCGTTGCGGCAGTGCTGCTGGTGATGGCTCTC
ATCGTTGTGGTTACGGCGGGCGCCGTTACGTTTTTCGCCGTCTCCATCCAGAAGGAGGTGGCTCGGGTCGAGATAAACCT
GCCCGCCTACGCCACCCGGCTCTATGATCTCATTCCCGGCCAGGCCAAGGCCTATCTTGAGATCGAGACCCCCGACAAGC
TCTACGCGCGCATCGATAGCCTTGTGGACGAACTGCGCGGTGCCTCGTTTGACCTGGTCAAGGGGGCACTCGGCGTGGTC
CAGCGCGCCTTTTCATCAACCCTCGGCTTTCTCCTGACAGTGGCAGGCTACTTTATTACACCAGTCTATCTTTACTACTT
CCTGGCCGACCTGCCCCGGCTCAGGGACGGGATCATGGCCCTCGTCCCCGGCCGCGCCCGCGACCGGGCAGCCATGCTGG
GCTCCGAGATCGACGGTGTCCTGTCGGGATTCGTGCGCGGGCAACTGGCGGTCTGTGCCATTCTGGCGGTGCTCTACAGC
ATCGGTCTCGTCATGATCGGCATCGACCTCGCCATCGTCATCGGCAGCCTGTCGGGGTTCCTCTTCATCATTCCCTACGT
GGGGACCGTCTTCGGCATCGTGGTTTCCATGATCATGGCTTTTCTCAAATTCCACGACATGCTCCATCCACTCCTCTGCC
TCGGCTGGTTCGCCATTGTCCAGGCCATCGAGGGGGCGCTCATCACACCGGCCGTGGTCGGCAACACCGTGGGACTCCAT
CCGGTTGTGGCTATCCTCGCCCTCTTCATCGGCGGCCAGTGGTTCGGCATCTTCGGCATGCTCCTGGCGGTCCCCGTGGC
TGCAGTCATCAAGGTGCTGCTCCGGCATGGCGTTGAGTGGTACCGGGCCACTCCGTTCTTCGAGCGACCATGA

Upstream 100 bases:

>100_bases
CATCTACAAGCACGCCATTACCTCCATTACCTCCGTGGACGGTCACTTCAGGCTGCACCAGTAGCACACTGTTCGCCGGT
CCGGGACGTCGCGGATTCCC

Downstream 100 bases:

>100_bases
GCGGGGGGCTCCTGATAGAGAGCGTCATCCCCGGCAGCATTGCCTCGGAGCTGGAGATCGAGCCGGGGGACCGTCTTGTT
GCCGTCAACAACCGCCCCCT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MVSRTGRTHLPLVDSLKEKLPYILCGLLALAGVLLVWSLGSTFLPVLLALILAYVLNPLVTWLEARRVPRVAAVLLVMAL
IVVVTAGAVTFFAVSIQKEVARVEINLPAYATRLYDLIPGQAKAYLEIETPDKLYARIDSLVDELRGASFDLVKGALGVV
QRAFSSTLGFLLTVAGYFITPVYLYYFLADLPRLRDGIMALVPGRARDRAAMLGSEIDGVLSGFVRGQLAVCAILAVLYS
IGLVMIGIDLAIVIGSLSGFLFIIPYVGTVFGIVVSMIMAFLKFHDMLHPLLCLGWFAIVQAIEGALITPAVVGNTVGLH
PVVAILALFIGGQWFGIFGMLLAVPVAAVIKVLLRHGVEWYRATPFFERP

Sequences:

>Translated_370_residues
MVSRTGRTHLPLVDSLKEKLPYILCGLLALAGVLLVWSLGSTFLPVLLALILAYVLNPLVTWLEARRVPRVAAVLLVMAL
IVVVTAGAVTFFAVSIQKEVARVEINLPAYATRLYDLIPGQAKAYLEIETPDKLYARIDSLVDELRGASFDLVKGALGVV
QRAFSSTLGFLLTVAGYFITPVYLYYFLADLPRLRDGIMALVPGRARDRAAMLGSEIDGVLSGFVRGQLAVCAILAVLYS
IGLVMIGIDLAIVIGSLSGFLFIIPYVGTVFGIVVSMIMAFLKFHDMLHPLLCLGWFAIVQAIEGALITPAVVGNTVGLH
PVVAILALFIGGQWFGIFGMLLAVPVAAVIKVLLRHGVEWYRATPFFERP
>Mature_370_residues
MVSRTGRTHLPLVDSLKEKLPYILCGLLALAGVLLVWSLGSTFLPVLLALILAYVLNPLVTWLEARRVPRVAAVLLVMAL
IVVVTAGAVTFFAVSIQKEVARVEINLPAYATRLYDLIPGQAKAYLEIETPDKLYARIDSLVDELRGASFDLVKGALGVV
QRAFSSTLGFLLTVAGYFITPVYLYYFLADLPRLRDGIMALVPGRARDRAAMLGSEIDGVLSGFVRGQLAVCAILAVLYS
IGLVMIGIDLAIVIGSLSGFLFIIPYVGTVFGIVVSMIMAFLKFHDMLHPLLCLGWFAIVQAIEGALITPAVVGNTVGLH
PVVAILALFIGGQWFGIFGMLLAVPVAAVIKVLLRHGVEWYRATPFFERP

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=314, Percent_Identity=24.203821656051, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI87082271, Length=312, Percent_Identity=25.9615384615385, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1787885, Length=339, Percent_Identity=27.4336283185841, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 40038; Mature: 40038

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSRTGRTHLPLVDSLKEKLPYILCGLLALAGVLLVWSLGSTFLPVLLALILAYVLNPLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWLEARRVPRVAAVLLVMALIVVVTAGAVTFFAVSIQKEVARVEINLPAYATRLYDLIPG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCC
QAKAYLEIETPDKLYARIDSLVDELRGASFDLVKGALGVVQRAFSSTLGFLLTVAGYFIT
CCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVYLYYFLADLPRLRDGIMALVPGRARDRAAMLGSEIDGVLSGFVRGQLAVCAILAVLYS
HHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLVMIGIDLAIVIGSLSGFLFIIPYVGTVFGIVVSMIMAFLKFHDMLHPLLCLGWFAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAIEGALITPAVVGNTVGLHPVVAILALFIGGQWFGIFGMLLAVPVAAVIKVLLRHGVEW
HHHCCCHHCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YRATPFFERP
HHCCCCCCCC
>Mature Secondary Structure
MVSRTGRTHLPLVDSLKEKLPYILCGLLALAGVLLVWSLGSTFLPVLLALILAYVLNPLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWLEARRVPRVAAVLLVMALIVVVTAGAVTFFAVSIQKEVARVEINLPAYATRLYDLIPG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHCCC
QAKAYLEIETPDKLYARIDSLVDELRGASFDLVKGALGVVQRAFSSTLGFLLTVAGYFIT
CCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVYLYYFLADLPRLRDGIMALVPGRARDRAAMLGSEIDGVLSGFVRGQLAVCAILAVLYS
HHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLVMIGIDLAIVIGSLSGFLFIIPYVGTVFGIVVSMIMAFLKFHDMLHPLLCLGWFAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAIEGALITPAVVGNTVGLHPVVAILALFIGGQWFGIFGMLLAVPVAAVIKVLLRHGVEW
HHHCCCHHCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YRATPFFERP
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]