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The map label for this gene is 39997095

Identifier: 39997095

GI number: 39997095

Start: 2189041

End: 2190342

Strand: Reverse

Name: 39997095

Synonym: GSU1997

Alternate gene names: NA

Gene position: 2190342-2189041 (Counterclockwise)

Preceding gene: 39997096

Following gene: 39997093

Centisome position: 57.43

GC content: 61.44

Gene sequence:

>1302_bases
ATGAGCGGGGGGCTCCTGATAGAGAGCGTCATCCCCGGCAGCATTGCCTCGGAGCTGGAGATCGAGCCGGGGGACCGTCT
TGTTGCCGTCAACAACCGCCCCCTGCGCGACATCGTCGACTACAATTTTCATGCGGACGGCGAAGAGCTTCTCTTGGAGA
TTGTAAAGCCTTCCGGCGAAGTGTGGGAGGTGGAGGTCGAACGGGACGACGACGAAGCGCTGGGCCTCGTTTTTGCCGCG
CCCGAGCCGGCCCGTTGCGGCAACAGGTGTGTGTTCTGTTTCGTTCACCAACTGCCGAAGGGGCTTCGTCGACCGCTCTA
TGTAAAGGATGAGGACTACCGGCTTTCCTTTCTCTACGGCAACTACGTCACCCTTTCGAACATTGGTGAGGAAGACCTGC
AGCGCATCATCGAGCAGCGCCTCTCCCCCCTCTATATTTCCGTGCATGCCACCGATCCGGCCCTGCGTGAGCGTCTTCTC
GGCAGAAAAGGCATCATTCCCATTCTCGACATCATGACCCGGCTCGCCGAGGCCCGCATCACCATGCATACCCAAGCGGT
CCTCTGCCCCGGCTGGAATGACGGCGATGCCCTTCGGCGGACCGTTGCCGATCTCGCGTCCTTGTATCCCCGGGTTGCTT
CCCTGGCCATCGTGCCGGTGGGGCTCACACGGCACCGGGACCGCCTGCCCCTGCTGGAGCCGGTCAGCGCCGACTATGCG
CGCGACTTCATCTACGAATGGCTGCCTGAGGCCCAGAGGCTCGCCGATGCCTTTGGCGAACCGTTCCTTTTCCTGGCGGA
CGAGTTTTTTATCAAGGCCGACGCACCCTTTCCTCCTCTGGACTTTTATGGCGACTTCCCCCAGATCGAGAATGGAGTCG
GGATGATTCCCCTCTTCATGGATGAAGCTGATCGGGTGCTGCGCCGCGCCCGCCGCATGAAACCTCGTACCCTCACGGTT
GTCACCGGCCATTCACCCTATCGCTACCTGGCCGATTTTCTCGCACGGCTCTCCGCCCGAACCGGCATCACTTTTCAGCC
GGTGGCGATTCCCAATCGGCTGTTCGGTGAGTCGGTCACGGTTACCGGTCTTGTTGCCGGCCGCGATATTCTGTCCGAAC
TGGCGGGGAGGAATCTGGGCGATGGGGTCCTGATCCCTGATGTGATGCTGAAGGAGGGGGAGGGTGTGTTTCTCGACGAC
CTGACCATTGGCGCGCTGGAGCAGGGACTCGGCGTACCGGTTGTTGTGGTCCCGTCATCGCCAGCAGGGGTGATGGAGGG
GATTAGGGCTCTTCGCCCCTGA

Upstream 100 bases:

>100_bases
TCTTCGGCATGCTCCTGGCGGTCCCCGTGGCTGCAGTCATCAAGGTGCTGCTCCGGCATGGCGTTGAGTGGTACCGGGCC
ACTCCGTTCTTCGAGCGACC

Downstream 100 bases:

>100_bases
CCCGGAGAGGGAACAGATAGCAGGAATAGAGAAAGGCGGGCGCCGGAGCGGCCCGCCTTTCTTTGTGCAAAAGCCGGAAA
ACGGCTGCGTTACATGTTGT

Product: PDZ domain-containing protein

Products: NA

Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSGGLLIESVIPGSIASELEIEPGDRLVAVNNRPLRDIVDYNFHADGEELLLEIVKPSGEVWEVEVERDDDEALGLVFAA
PEPARCGNRCVFCFVHQLPKGLRRPLYVKDEDYRLSFLYGNYVTLSNIGEEDLQRIIEQRLSPLYISVHATDPALRERLL
GRKGIIPILDIMTRLAEARITMHTQAVLCPGWNDGDALRRTVADLASLYPRVASLAIVPVGLTRHRDRLPLLEPVSADYA
RDFIYEWLPEAQRLADAFGEPFLFLADEFFIKADAPFPPLDFYGDFPQIENGVGMIPLFMDEADRVLRRARRMKPRTLTV
VTGHSPYRYLADFLARLSARTGITFQPVAIPNRLFGESVTVTGLVAGRDILSELAGRNLGDGVLIPDVMLKEGEGVFLDD
LTIGALEQGLGVPVVVVPSSPAGVMEGIRALRP

Sequences:

>Translated_433_residues
MSGGLLIESVIPGSIASELEIEPGDRLVAVNNRPLRDIVDYNFHADGEELLLEIVKPSGEVWEVEVERDDDEALGLVFAA
PEPARCGNRCVFCFVHQLPKGLRRPLYVKDEDYRLSFLYGNYVTLSNIGEEDLQRIIEQRLSPLYISVHATDPALRERLL
GRKGIIPILDIMTRLAEARITMHTQAVLCPGWNDGDALRRTVADLASLYPRVASLAIVPVGLTRHRDRLPLLEPVSADYA
RDFIYEWLPEAQRLADAFGEPFLFLADEFFIKADAPFPPLDFYGDFPQIENGVGMIPLFMDEADRVLRRARRMKPRTLTV
VTGHSPYRYLADFLARLSARTGITFQPVAIPNRLFGESVTVTGLVAGRDILSELAGRNLGDGVLIPDVMLKEGEGVFLDD
LTIGALEQGLGVPVVVVPSSPAGVMEGIRALRP
>Mature_432_residues
SGGLLIESVIPGSIASELEIEPGDRLVAVNNRPLRDIVDYNFHADGEELLLEIVKPSGEVWEVEVERDDDEALGLVFAAP
EPARCGNRCVFCFVHQLPKGLRRPLYVKDEDYRLSFLYGNYVTLSNIGEEDLQRIIEQRLSPLYISVHATDPALRERLLG
RKGIIPILDIMTRLAEARITMHTQAVLCPGWNDGDALRRTVADLASLYPRVASLAIVPVGLTRHRDRLPLLEPVSADYAR
DFIYEWLPEAQRLADAFGEPFLFLADEFFIKADAPFPPLDFYGDFPQIENGVGMIPLFMDEADRVLRRARRMKPRTLTVV
TGHSPYRYLADFLARLSARTGITFQPVAIPNRLFGESVTVTGLVAGRDILSELAGRNLGDGVLIPDVMLKEGEGVFLDDL
TIGALEQGLGVPVVVVPSSPAGVMEGIRALRP

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48009; Mature: 47878

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50106 PDZ ; PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGGLLIESVIPGSIASELEIEPGDRLVAVNNRPLRDIVDYNFHADGEELLLEIVKPSGE
CCCCEEEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHCCCCC
VWEVEVERDDDEALGLVFAAPEPARCGNRCVFCFVHQLPKGLRRPLYVKDEDYRLSFLYG
EEEEEEECCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHCCCEEECCCCCEEEEEEC
NYVTLSNIGEEDLQRIIEQRLSPLYISVHATDPALRERLLGRKGIIPILDIMTRLAEARI
CEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHE
TMHTQAVLCPGWNDGDALRRTVADLASLYPRVASLAIVPVGLTRHRDRLPLLEPVSADYA
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHH
RDFIYEWLPEAQRLADAFGEPFLFLADEFFIKADAPFPPLDFYGDFPQIENGVGMIPLFM
HHHHHHHHHHHHHHHHHHCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHH
DEADRVLRRARRMKPRTLTVVTGHSPYRYLADFLARLSARTGITFQPVAIPNRLFGESVT
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCEE
VTGLVAGRDILSELAGRNLGDGVLIPDVMLKEGEGVFLDDLTIGALEQGLGVPVVVVPSS
EEEEEHHHHHHHHHHCCCCCCCEECCHHHHCCCCCEEEECCCHHHHHHCCCCCEEEECCC
PAGVMEGIRALRP
CHHHHHHHHHHCC
>Mature Secondary Structure 
SGGLLIESVIPGSIASELEIEPGDRLVAVNNRPLRDIVDYNFHADGEELLLEIVKPSGE
CCCEEEEECCCCCCCCCEEECCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHCCCCC
VWEVEVERDDDEALGLVFAAPEPARCGNRCVFCFVHQLPKGLRRPLYVKDEDYRLSFLYG
EEEEEEECCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHCCCEEECCCCCEEEEEEC
NYVTLSNIGEEDLQRIIEQRLSPLYISVHATDPALRERLLGRKGIIPILDIMTRLAEARI
CEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHE
TMHTQAVLCPGWNDGDALRRTVADLASLYPRVASLAIVPVGLTRHRDRLPLLEPVSADYA
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHH
RDFIYEWLPEAQRLADAFGEPFLFLADEFFIKADAPFPPLDFYGDFPQIENGVGMIPLFM
HHHHHHHHHHHHHHHHHHCCCEEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHH
DEADRVLRRARRMKPRTLTVVTGHSPYRYLADFLARLSARTGITFQPVAIPNRLFGESVT
HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCEE
VTGLVAGRDILSELAGRNLGDGVLIPDVMLKEGEGVFLDDLTIGALEQGLGVPVVVVPSS
EEEEEHHHHHHHHHHCCCCCCCEECCHHHHCCCCCEEEECCCHHHHHHCCCCCEEEECCC
PAGVMEGIRALRP
CHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA