Click here to switch to the map view.

The map label for this gene is 39997093

Identifier: 39997093

GI number: 39997093

Start: 2187104

End: 2187832

Strand: Reverse

Name: 39997093

Synonym: GSU1995

Alternate gene names: NA

Gene position: 2187832-2187104 (Counterclockwise)

Preceding gene: 39997095

Following gene: 39997091

Centisome position: 57.36

GC content: 55.69

Gene sequence:

>729_bases
ATGTCGCATGAAGAGCCCCTTTTCGTGGCTTGTTTACCGCACAAGCGGCAGTACTGTTTGTCAATTCATAGAGGAGATGC
CGTGATCCGCACATGCACCGGATTTGCCGTAATTGCCGTATTGTCGCTGCCTGGCGCCGCTTTGGCGGAAACGTACCAGT
GGACCGACGATGCGGGCATTGTTCATTTTACCGACAATCTTGAACGGATACCATCCAAGTATCTCAAGCGGGTGAAGGAA
CTCCCTTCCGTCAAGGGAGAGACGCCTTCGTCTCCTTCCATGGAATCGCCTGGCGCTCCGGCAGAGGTAAAACCCGCCCT
CAAGTCTCAGCCGCCCCTTCTCTATGGTGGCCTGGACGAACGGGGCTGGCGTTCGCGCTTCAGTTCCCTGCGGGAAGAAC
TCAAAGTAATAGAGGAAAGTCTTCCAAAGAAGAGGGAAGAGTTGAATCAACTCCACCGTCGTTGGGTTATCAGCATGGGC
AGAGTTCCCAGCCAGGGAGAGCTAAAAGATTTTGCCGAGAAACAAGCCGAGGGTTCCGCCACTGTCGAGGACAACCCCTA
TGTCAACAAGAGTGCGCTCAGCACGCCGGGGCGCCATCGTGAAGCTTACTACGCTAAGCTTCAGGAGGTACGCCAGGAAG
AGGCGCGGGTCGGAGAAATCAAGAAGCAACTCGAAGATCTGGAACTTGAAGCCTCGCGGGTGGGAGTGCCGTTCGAGTGG
CGGAGGTGA

Upstream 100 bases:

>100_bases
GACGCATTTTCATGATAAGCTCCTAATATAGTGAATTTGTTAAATAAACGCCCTTTAAACGCCGTACTATACATGGCAGG
GGAGAGGTCGTCAATGCGAA

Downstream 100 bases:

>100_bases
TGTCGGGCAGGTCGGAATGCAGAAATAAAAAGGGGGAGCTCACGGGCTCCCCCATTGTGCATCCGGCGAAACGAAAGGTT
TATGCTCTTTTGCGTCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSHEEPLFVACLPHKRQYCLSIHRGDAVIRTCTGFAVIAVLSLPGAALAETYQWTDDAGIVHFTDNLERIPSKYLKRVKE
LPSVKGETPSSPSMESPGAPAEVKPALKSQPPLLYGGLDERGWRSRFSSLREELKVIEESLPKKREELNQLHRRWVISMG
RVPSQGELKDFAEKQAEGSATVEDNPYVNKSALSTPGRHREAYYAKLQEVRQEEARVGEIKKQLEDLELEASRVGVPFEW
RR

Sequences:

>Translated_242_residues
MSHEEPLFVACLPHKRQYCLSIHRGDAVIRTCTGFAVIAVLSLPGAALAETYQWTDDAGIVHFTDNLERIPSKYLKRVKE
LPSVKGETPSSPSMESPGAPAEVKPALKSQPPLLYGGLDERGWRSRFSSLREELKVIEESLPKKREELNQLHRRWVISMG
RVPSQGELKDFAEKQAEGSATVEDNPYVNKSALSTPGRHREAYYAKLQEVRQEEARVGEIKKQLEDLELEASRVGVPFEW
RR
>Mature_241_residues
SHEEPLFVACLPHKRQYCLSIHRGDAVIRTCTGFAVIAVLSLPGAALAETYQWTDDAGIVHFTDNLERIPSKYLKRVKEL
PSVKGETPSSPSMESPGAPAEVKPALKSQPPLLYGGLDERGWRSRFSSLREELKVIEESLPKKREELNQLHRRWVISMGR
VPSQGELKDFAEKQAEGSATVEDNPYVNKSALSTPGRHREAYYAKLQEVRQEEARVGEIKKQLEDLELEASRVGVPFEWR
R

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27348; Mature: 27217

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEEPLFVACLPHKRQYCLSIHRGDAVIRTCTGFAVIAVLSLPGAALAETYQWTDDAGI
CCCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCE
VHFTDNLERIPSKYLKRVKELPSVKGETPSSPSMESPGAPAEVKPALKSQPPLLYGGLDE
EEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCC
RGWRSRFSSLREELKVIEESLPKKREELNQLHRRWVISMGRVPSQGELKDFAEKQAEGSA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
TVEDNPYVNKSALSTPGRHREAYYAKLQEVRQEEARVGEIKKQLEDLELEASRVGVPFEW
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RR
CC
>Mature Secondary Structure 
SHEEPLFVACLPHKRQYCLSIHRGDAVIRTCTGFAVIAVLSLPGAALAETYQWTDDAGI
CCCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCE
VHFTDNLERIPSKYLKRVKELPSVKGETPSSPSMESPGAPAEVKPALKSQPPLLYGGLDE
EEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCCCC
RGWRSRFSSLREELKVIEESLPKKREELNQLHRRWVISMGRVPSQGELKDFAEKQAEGSA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
TVEDNPYVNKSALSTPGRHREAYYAKLQEVRQEEARVGEIKKQLEDLELEASRVGVPFEW
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA