Definition Geobacter sulfurreducens PCA chromosome, complete genome.
Accession NC_002939
Length 3,814,139

Click here to switch to the map view.

The map label for this gene is wzc [C]

Identifier: 39997082

GI number: 39997082

Start: 2174883

End: 2176355

Strand: Reverse

Name: wzc [C]

Synonym: GSU1984

Alternate gene names: 39997082

Gene position: 2176355-2174883 (Counterclockwise)

Preceding gene: 39997083

Following gene: 39997081

Centisome position: 57.06

GC content: 56.48

Gene sequence:

>1473_bases
ATGCAGCAGTCCGAATTCGACTACCGGCACTATCTCACGCTTATCGTCGCCCGTAAGCGCCTTTTTGTCGTGGTGGCCCT
CGCGGTCATGGCTGCCGCAGTGGTCTACAGCTACGTCCTTCCCAAGAAGTATGAGGCCAGGAGCACCGTATTCATCGAGA
AAAATGTCATCAGCGAACTGGTCAAGGGGATTGCCGTAACTCCTTCCATGGAACAGGCCATCAAGGGCCTTAGCGAGGCA
ATAACCAGCCGTACGCTCGTCACCAAGGTGATCAATGATCTCGACCTCGACGTGACCACCAAAAGCAATGCCGAGATCGA
GGCCCGGGTTCGCGCCATCCAGCAGAACATAACCATCAAACTCAAGGGCGACAACATTTTCACCATCTCCTACGTGGACA
AGGATCCCCGAGTGGCCCGCGATTTCGTCAATACCCTGGTCCGGCGCTACGTGGAGGAAAACATATCCTCCAAGCGGGAA
GAATCCTACGGTGCCATCAAATTCCTTTCCGAGCAGATCGACACCTTCCGCGGCAAACTCGAAGAAGCCGAAGGCGAACT
CAACCGGTACAAAACCGAGAAAGGGGGGGTCATCGCTATCGACGAAGCAAAGCTGTTCGAGGAGATCAACGTCGCTCAGC
AGAAACTCTATGATATCCAGCTGCGCAGGCGCCACCTGGAAGGACTTCGACCGGTCACGCGCAAGGCGGGAGACCCCCTC
CAGGTAAAGCTCGTCGCCCTCCAGAAGCAGCTTGAAGAGCTCCGTGTCTCTTACACCGACAGCTACCCCGAGGTGCTCCG
CGTCAGGGGAGAAATCGAGACCCTCAAGGAGCAGATGAAAAATCGTTCGCCCCAGCAGGAAACGGTCGTTGACCCCCAGG
AGTACGAGAAGGCCGAAGCGGAACTCCAGGCGCTCAAGGTCAGTGAAGACGGCCTCAAACGCTACATCGCCACCAATCAG
GCACTGCTCAGGAATATCCCTTCGGCCAAGGCCGGGCTTGAAAAGCTCGAACTGGAAAAGAAGAACCGCAAGGACCTTTA
CGACCAGCTCATGGCGCGTCATGGCCAATCCGAGGTGTCGAAGCAGATGGAAGTCCAAGACAAGACAACCACCTTCCGCA
TCGTCGACCCGGCGGTCACGCCGTCAAGTCCCATTAGCCCCAACCGGGTCAAGATCATGCTGATGGGGATTGTCGCTGGA
CTCGGCTGCGCCCTGGGACTCATCGTCCTCCTCGACCGGCTTAATAATTCAGTGCATTCGGTTGATGCGCTGAAGGAAAC
CAGGATTCCCGTCCTGGCCGTCATCCCCAAGATTCGCACCATCGAGGCGGTTGCCCGGGAGCGGAGCGAGAACATCAGGG
TATTTGCTGCGGCTGGGGCGTGTTTCATGGTTATTCTCGCGTTTCTCGTCATGGAACTGCTGAATATCTCACCCGTGGAT
CGGATCATCAGCAGGTTGCATGGAATGCTGTAA

Upstream 100 bases:

>100_bases
TCGAGGTGAAGGCCAAGGATCTGGTCAAGGACGGCGACCTGAGCCAGAACGTAAAGCTCAGCCCGGGAGATTACATCATC
GTTAAGGAAGGGATGTTCTG

Downstream 100 bases:

>100_bases
CTCATTTCTATCGCAGCATTGATGTGATGTCTGAATGGAGAAAGGAAACGCATGAGCAGAATTGAACAGGCCCTTGAGAA
AGCGGCAATGCTGCGGGGGA

Product: polysaccharide chain length determinant protein

Products: ADP; protein tyrosine phosphate [C]

Alternate protein names: Lipopolysaccharide Biosynthesis Protein; Polysaccharide Chain Length Determinant Protein; Chain Length Determinant Family Protein; Chain Length Determinant Protein; Non-Specific Protein-Tyrosine Kinase; Capsular Exopolysaccharide Family; Exopolysaccharide Biosynthesis Protein; Chain Length Determinant Protein EpsF

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MQQSEFDYRHYLTLIVARKRLFVVVALAVMAAAVVYSYVLPKKYEARSTVFIEKNVISELVKGIAVTPSMEQAIKGLSEA
ITSRTLVTKVINDLDLDVTTKSNAEIEARVRAIQQNITIKLKGDNIFTISYVDKDPRVARDFVNTLVRRYVEENISSKRE
ESYGAIKFLSEQIDTFRGKLEEAEGELNRYKTEKGGVIAIDEAKLFEEINVAQQKLYDIQLRRRHLEGLRPVTRKAGDPL
QVKLVALQKQLEELRVSYTDSYPEVLRVRGEIETLKEQMKNRSPQQETVVDPQEYEKAEAELQALKVSEDGLKRYIATNQ
ALLRNIPSAKAGLEKLELEKKNRKDLYDQLMARHGQSEVSKQMEVQDKTTTFRIVDPAVTPSSPISPNRVKIMLMGIVAG
LGCALGLIVLLDRLNNSVHSVDALKETRIPVLAVIPKIRTIEAVARERSENIRVFAAAGACFMVILAFLVMELLNISPVD
RIISRLHGML

Sequences:

>Translated_490_residues
MQQSEFDYRHYLTLIVARKRLFVVVALAVMAAAVVYSYVLPKKYEARSTVFIEKNVISELVKGIAVTPSMEQAIKGLSEA
ITSRTLVTKVINDLDLDVTTKSNAEIEARVRAIQQNITIKLKGDNIFTISYVDKDPRVARDFVNTLVRRYVEENISSKRE
ESYGAIKFLSEQIDTFRGKLEEAEGELNRYKTEKGGVIAIDEAKLFEEINVAQQKLYDIQLRRRHLEGLRPVTRKAGDPL
QVKLVALQKQLEELRVSYTDSYPEVLRVRGEIETLKEQMKNRSPQQETVVDPQEYEKAEAELQALKVSEDGLKRYIATNQ
ALLRNIPSAKAGLEKLELEKKNRKDLYDQLMARHGQSEVSKQMEVQDKTTTFRIVDPAVTPSSPISPNRVKIMLMGIVAG
LGCALGLIVLLDRLNNSVHSVDALKETRIPVLAVIPKIRTIEAVARERSENIRVFAAAGACFMVILAFLVMELLNISPVD
RIISRLHGML
>Mature_490_residues
MQQSEFDYRHYLTLIVARKRLFVVVALAVMAAAVVYSYVLPKKYEARSTVFIEKNVISELVKGIAVTPSMEQAIKGLSEA
ITSRTLVTKVINDLDLDVTTKSNAEIEARVRAIQQNITIKLKGDNIFTISYVDKDPRVARDFVNTLVRRYVEENISSKRE
ESYGAIKFLSEQIDTFRGKLEEAEGELNRYKTEKGGVIAIDEAKLFEEINVAQQKLYDIQLRRRHLEGLRPVTRKAGDPL
QVKLVALQKQLEELRVSYTDSYPEVLRVRGEIETLKEQMKNRSPQQETVVDPQEYEKAEAELQALKVSEDGLKRYIATNQ
ALLRNIPSAKAGLEKLELEKKNRKDLYDQLMARHGQSEVSKQMEVQDKTTTFRIVDPAVTPSSPISPNRVKIMLMGIVAG
LGCALGLIVLLDRLNNSVHSVDALKETRIPVLAVIPKIRTIEAVARERSENIRVFAAAGACFMVILAFLVMELLNISPVD
RIISRLHGML

Specific function: Required For The Extracellular Polysaccharide Colanic Acid Synthesis. The Autophosphorylated Form Is Inactive. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Inner membrane (Probable) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.1.112 [C]

Molecular weight: Translated: 55350; Mature: 55350

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQSEFDYRHYLTLIVARKRLFVVVALAVMAAAVVYSYVLPKKYEARSTVFIEKNVISEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH
VKGIAVTPSMEQAIKGLSEAITSRTLVTKVINDLDLDVTTKSNAEIEARVRAIQQNITIK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCEEE
LKGDNIFTISYVDKDPRVARDFVNTLVRRYVEENISSKREESYGAIKFLSEQIDTFRGKL
EECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAEGELNRYKTEKGGVIAIDEAKLFEEINVAQQKLYDIQLRRRHLEGLRPVTRKAGDPL
HHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCH
QVKLVALQKQLEELRVSYTDSYPEVLRVRGEIETLKEQMKNRSPQQETVVDPQEYEKAEA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHH
ELQALKVSEDGLKRYIATNQALLRNIPSAKAGLEKLELEKKNRKDLYDQLMARHGQSEVS
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KQMEVQDKTTTFRIVDPAVTPSSPISPNRVKIMLMGIVAGLGCALGLIVLLDRLNNSVHS
HHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VDALKETRIPVLAVIPKIRTIEAVARERSENIRVFAAAGACFMVILAFLVMELLNISPVD
HHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHH
RIISRLHGML
HHHHHHHCCC
>Mature Secondary Structure
MQQSEFDYRHYLTLIVARKRLFVVVALAVMAAAVVYSYVLPKKYEARSTVFIEKNVISEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH
VKGIAVTPSMEQAIKGLSEAITSRTLVTKVINDLDLDVTTKSNAEIEARVRAIQQNITIK
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCEEE
LKGDNIFTISYVDKDPRVARDFVNTLVRRYVEENISSKREESYGAIKFLSEQIDTFRGKL
EECCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEAEGELNRYKTEKGGVIAIDEAKLFEEINVAQQKLYDIQLRRRHLEGLRPVTRKAGDPL
HHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCH
QVKLVALQKQLEELRVSYTDSYPEVLRVRGEIETLKEQMKNRSPQQETVVDPQEYEKAEA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHH
ELQALKVSEDGLKRYIATNQALLRNIPSAKAGLEKLELEKKNRKDLYDQLMARHGQSEVS
HHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KQMEVQDKTTTFRIVDPAVTPSSPISPNRVKIMLMGIVAGLGCALGLIVLLDRLNNSVHS
HHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
VDALKETRIPVLAVIPKIRTIEAVARERSENIRVFAAAGACFMVILAFLVMELLNISPVD
HHHHHHHCCCHHHHHCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHH
RIISRLHGML
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; a protein tyrosine [C]

Specific reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA